RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 MCAMP43121 646 aa18.48■□□□□ 0.55
SNX13-205ENST00000471744 PITPNM2Q9BZ72 1349 aa18.48■□□□□ 0.55
SNX13-205ENST00000471744 MYH2Q9UKX2 1941 aa18.47■□□□□ 0.55
SNX13-205ENST00000471744 WNT10BO00744 389 aa18.47■□□□□ 0.55
SNX13-205ENST00000471744 MYO1BO43795 1136 aa18.47■□□□□ 0.55
SNX13-205ENST00000471744 SCARF1Q14162 830 aa18.47■□□□□ 0.55
SNX13-205ENST00000471744 CFAP100Q494V2 611 aa18.47■□□□□ 0.55
SNX13-205ENST00000471744 CNTROBQ8N137 903 aa18.47■□□□□ 0.55
SNX13-205ENST00000471744 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.47■□□□□ 0.55
SNX13-205ENST00000471744 TEKT1Q969V4 418 aa18.47■□□□□ 0.55
SNX13-205ENST00000471744 DCPSQ96C86 337 aaKnown RBP18.47■□□□□ 0.55
SNX13-205ENST00000471744 TRPM7Q96QT4 1865 aa18.46■□□□□ 0.55
SNX13-205ENST00000471744 RBM5P52756 815 aaKnown RBP eCLIP18.46■□□□□ 0.55
SNX13-205ENST00000471744 MAP1SQ66K74 1059 aaPredicted RBP18.46■□□□□ 0.55
SNX13-205ENST00000471744 HHIPL2Q6UWX4 724 aa18.46■□□□□ 0.55
SNX13-205ENST00000471744 ERICH6Q7L0X2 663 aa18.46■□□□□ 0.55
SNX13-205ENST00000471744 CDC37L1Q7L3B6 337 aa18.46■□□□□ 0.55
SNX13-205ENST00000471744 SLF2Q8IX21 1173 aa18.46■□□□□ 0.55
SNX13-205ENST00000471744 GPATCH3Q96I76 525 aa18.46■□□□□ 0.55
SNX13-205ENST00000471744 ZBED3Q96IU2 234 aaPredicted RBP18.46■□□□□ 0.55
SNX13-205ENST00000471744 ABCF2Q9UG63 623 aa18.46■□□□□ 0.55
SNX13-205ENST00000471744 SPDYE2BA6NHP3 402 aa18.45■□□□□ 0.54
SNX13-205ENST00000471744 SMARCA5O60264 1052 aaPredicted RBP18.45■□□□□ 0.54
SNX13-205ENST00000471744 SPDYE6P0CI01 402 aa18.45■□□□□ 0.54
SNX13-205ENST00000471744 PRDX5P30044 214 aa18.45■□□□□ 0.54
SNX13-205ENST00000471744 CRKP46108 304 aa18.45■□□□□ 0.54
SNX13-205ENST00000471744 GGA3Q9NZ52 723 aa18.45■□□□□ 0.54
SNX13-205ENST00000471744 NEFLP07196 543 aa18.44■□□□□ 0.54
SNX13-205ENST00000471744 GRIK5Q16478 980 aa18.44■□□□□ 0.54
SNX13-205ENST00000471744 NBPF9Q3BBW0 867 aa18.44■□□□□ 0.54
SNX13-205ENST00000471744 DZIP1Q86YF9 867 aaKnown RBP18.44■□□□□ 0.54
SNX13-205ENST00000471744 SULF1Q8IWU6 871 aa18.44■□□□□ 0.54
SNX13-205ENST00000471744 SMC5Q8IY18 1101 aa18.44■□□□□ 0.54
SNX13-205ENST00000471744 ZDHHC15Q96MV8 337 aa18.44■□□□□ 0.54
SNX13-205ENST00000471744 BCL11AQ9H165 835 aa18.44■□□□□ 0.54
SNX13-205ENST00000471744 MAST2Q6P0Q8 1798 aa18.43■□□□□ 0.54
SNX13-205ENST00000471744 ITGBL1O95965 494 aaPredicted RBP18.43■□□□□ 0.54
SNX13-205ENST00000471744 GSTO1P78417 241 aa18.43■□□□□ 0.54
SNX13-205ENST00000471744 TTF1Q15361 905 aaPredicted RBP18.43■□□□□ 0.54
SNX13-205ENST00000471744 ANKRD45Q5TZF3 282 aa18.43■□□□□ 0.54
SNX13-205ENST00000471744 ANGEL2Q5VTE6 544 aaKnown RBP18.43■□□□□ 0.54
SNX13-205ENST00000471744 TMED8Q6PL24 325 aaPredicted RBP18.43■□□□□ 0.54
SNX13-205ENST00000471744 PI16Q6UXB8 463 aa18.43■□□□□ 0.54
SNX13-205ENST00000471744 KRT26Q7Z3Y9 468 aa18.43■□□□□ 0.54
SNX13-205ENST00000471744 APOBEC3FQ8IUX4 373 aaKnown RBP18.43■□□□□ 0.54
SNX13-205ENST00000471744 LRP2BPQ9P2M1 347 aa18.43■□□□□ 0.54
SNX13-205ENST00000471744 MYO5AQ9Y4I1 1855 aaKnown RBP18.43■□□□□ 0.54
SNX13-205ENST00000471744 PASKQ96RG2 1323 aa18.43■□□□□ 0.54
SNX13-205ENST00000471744 ATP5JP18859 108 aa18.42■□□□□ 0.54
SNX13-205ENST00000471744 ZAP70P43403 619 aa18.42■□□□□ 0.54
SNX13-205ENST00000471744 SNRKQ9NRH2 765 aa18.42■□□□□ 0.54
SNX13-205ENST00000471744 ECHDC1Q9NTX5 307 aa18.42■□□□□ 0.54
SNX13-205ENST00000471744 DOCK2Q92608 1830 aa18.42■□□□□ 0.54
SNX13-205ENST00000471744 IGHDP01880 384 aa18.41■□□□□ 0.54
SNX13-205ENST00000471744 CYP2E1P05181 493 aaPredicted RBP18.41■□□□□ 0.54
SNX13-205ENST00000471744 LDHCP07864 332 aa18.41■□□□□ 0.54
SNX13-205ENST00000471744 TNFAIP1Q13829 316 aa18.41■□□□□ 0.54
SNX13-205ENST00000471744 FAM163AQ96GL9 167 aaPredicted RBP18.41■□□□□ 0.54
SNX13-205ENST00000471744 PRMT6Q96LA8 375 aaPredicted RBP18.41■□□□□ 0.54
SNX13-205ENST00000471744 RAI14Q9P0K7 980 aa18.41■□□□□ 0.54
SNX13-205ENST00000471744 TTC41PQ6P2S7 1318 aa18.41■□□□□ 0.54
SNX13-205ENST00000471744 HSPA6P17066 643 aa18.4■□□□□ 0.54
SNX13-205ENST00000471744 SPDYE2Q495Y8 402 aa18.4■□□□□ 0.54
SNX13-205ENST00000471744 TBC1D9Q6ZT07 1266 aa18.4■□□□□ 0.54
SNX13-205ENST00000471744 GLIS2Q9BZE0 524 aaPredicted RBP18.4■□□□□ 0.54
SNX13-205ENST00000471744 TMOD2Q9NZR1 351 aa18.4■□□□□ 0.54
SNX13-205ENST00000471744 ASTN2O75129 1339 aaPredicted RBP18.4■□□□□ 0.54
SNX13-205ENST00000471744 ERC2O15083 957 aa18.39■□□□□ 0.53
SNX13-205ENST00000471744 APLP1P51693 650 aa18.39■□□□□ 0.53
SNX13-205ENST00000471744 MECOMQ03112 1051 aa18.39■□□□□ 0.53
SNX13-205ENST00000471744 DIXDC1Q155Q3 683 aa18.39■□□□□ 0.53
SNX13-205ENST00000471744 USP48Q86UV5 1035 aa18.39■□□□□ 0.53
SNX13-205ENST00000471744 NSUN4Q96CB9 384 aaKnown RBP18.39■□□□□ 0.53
SNX13-205ENST00000471744 DAGLAQ9Y4D2 1042 aa18.39■□□□□ 0.53
SNX13-205ENST00000471744 PPP2R3BQ9Y5P8 575 aa18.39■□□□□ 0.53
SNX13-205ENST00000471744 GAKO14976 1311 aa18.39■□□□□ 0.53
SNX13-205ENST00000471744 MYH7P12883 1935 aa18.39■□□□□ 0.53
SNX13-205ENST00000471744 MAP3K12Q12852 859 aa18.38■□□□□ 0.53
SNX13-205ENST00000471744 APOBEC3HQ6NTF7 200 aaKnown RBP18.38■□□□□ 0.53
SNX13-205ENST00000471744 HAUS7Q99871 368 aa18.38■□□□□ 0.53
SNX13-205ENST00000471744 BOLA2Q9H3K6 86 aa18.38■□□□□ 0.53
SNX13-205ENST00000471744 TDRD3Q9H7E2 651 aaKnown RBP18.38■□□□□ 0.53
SNX13-205ENST00000471744 ZNF70Q9UC06 446 aaPredicted RBP18.38■□□□□ 0.53
SNX13-205ENST00000471744 PCDHAC2Q9Y5I4 1007 aa18.38■□□□□ 0.53
SNX13-205ENST00000471744 MROH7-TTC4A0A0A0MT08 1334 aa18.38■□□□□ 0.53
SNX13-205ENST00000471744 MAP4K4O95819 1239 aaPredicted RBP18.37■□□□□ 0.53
SNX13-205ENST00000471744 MX1P20591 662 aa18.37■□□□□ 0.53
SNX13-205ENST00000471744 TNNI2P48788 182 aa18.37■□□□□ 0.53
SNX13-205ENST00000471744 NUCB1Q02818 461 aa18.37■□□□□ 0.53
SNX13-205ENST00000471744 FKBP1CQ5VVH2 108 aa18.37■□□□□ 0.53
SNX13-205ENST00000471744 NAA16Q6N069 864 aaPredicted RBP18.37■□□□□ 0.53
SNX13-205ENST00000471744 DNAJC2Q99543 621 aaKnown RBP18.37■□□□□ 0.53
SNX13-205ENST00000471744 VEZTQ9HBM0 779 aa18.37■□□□□ 0.53
SNX13-205ENST00000471744 PIH1D3Q9NQM4 214 aaKnown RBP18.37■□□□□ 0.53
SNX13-205ENST00000471744 PAG1Q9NWQ8 432 aa18.37■□□□□ 0.53
SNX13-205ENST00000471744 CLRN2A0PK11 232 aa18.36■□□□□ 0.53
SNX13-205ENST00000471744 ADM5C9JUS6 153 aa18.36■□□□□ 0.53
SNX13-205ENST00000471744 IDH1O75874 414 aaKnown RBP18.36■□□□□ 0.53
SNX13-205ENST00000471744 GLRX3O76003 335 aaKnown RBP18.36■□□□□ 0.53
SNX13-205ENST00000471744 CHD1LQ86WJ1 897 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms