RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 DZIP1Q86YF9 867 aaKnown RBP17.08■□□□□ 0.32
SSR4-207ENST00000471724 KIAA0825Q8IV33 1275 aa17.08■□□□□ 0.32
SSR4-207ENST00000471724 PLEKHM2Q8IWE5 1019 aa17.08■□□□□ 0.32
SSR4-207ENST00000471724 MICALL2Q8IY33 904 aa17.08■□□□□ 0.32
SSR4-207ENST00000471724 MXD3Q9BW11 206 aa17.08■□□□□ 0.32
SSR4-207ENST00000471724 BOLA2Q9H3K6 86 aa17.08■□□□□ 0.32
SSR4-207ENST00000471724 OSBPL3Q9H4L5 887 aa17.08■□□□□ 0.32
SSR4-207ENST00000471724 TAF1DQ9H5J8 278 aaPredicted RBP17.08■□□□□ 0.32
SSR4-207ENST00000471724 CYP2E1P05181 493 aaPredicted RBP17.07■□□□□ 0.32
SSR4-207ENST00000471724 PRDX5P30044 214 aa17.07■□□□□ 0.32
SSR4-207ENST00000471724 EPHX2P34913 555 aa17.07■□□□□ 0.32
SSR4-207ENST00000471724 APLP1P51693 650 aa17.07■□□□□ 0.32
SSR4-207ENST00000471724 TSHZ3Q63HK5 1081 aa17.07■□□□□ 0.32
SSR4-207ENST00000471724 TMED8Q6PL24 325 aaPredicted RBP17.07■□□□□ 0.32
SSR4-207ENST00000471724 ERICH6Q7L0X2 663 aa17.07■□□□□ 0.32
SSR4-207ENST00000471724 PAG1Q9NWQ8 432 aa17.07■□□□□ 0.32
SSR4-207ENST00000471724 LRP2BPQ9P2M1 347 aa17.07■□□□□ 0.32
SSR4-207ENST00000471724 CNOT7Q9UIV1 285 aaKnown RBP17.07■□□□□ 0.32
SSR4-207ENST00000471724 TTF2Q9UNY4 1162 aaKnown RBP17.07■□□□□ 0.32
SSR4-207ENST00000471724 GOLIM4O00461 696 aa17.06■□□□□ 0.32
SSR4-207ENST00000471724 PDE4AP27815 886 aa17.06■□□□□ 0.32
SSR4-207ENST00000471724 ZNF280AP59817 542 aaPredicted RBP17.06■□□□□ 0.32
SSR4-207ENST00000471724 HDLBPQ00341 1268 aaKnown RBP17.06■□□□□ 0.32
SSR4-207ENST00000471724 LDHDQ86WU2 507 aa17.06■□□□□ 0.32
SSR4-207ENST00000471724 SLF2Q8IX21 1173 aa17.06■□□□□ 0.32
SSR4-207ENST00000471724 ADARB2Q9NS39 739 aaKnown RBP17.06■□□□□ 0.32
SSR4-207ENST00000471724 F8W031 263 aaPredicted RBP17.05■□□□□ 0.32
SSR4-207ENST00000471724 GSTO1P78417 241 aa17.05■□□□□ 0.32
SSR4-207ENST00000471724 MAP3K12Q12852 859 aa17.05■□□□□ 0.32
SSR4-207ENST00000471724 CHADLQ6NUI6 762 aa17.05■□□□□ 0.32
SSR4-207ENST00000471724 TEKT1Q969V4 418 aa17.05■□□□□ 0.32
SSR4-207ENST00000471724 RAI14Q9P0K7 980 aa17.05■□□□□ 0.32
SSR4-207ENST00000471724 SERPINA10Q9UK55 444 aa17.05■□□□□ 0.32
SSR4-207ENST00000471724 IDH1O75874 414 aaKnown RBP17.04■□□□□ 0.32
SSR4-207ENST00000471724 LRRFIP1Q32MZ4 808 aaKnown RBP17.04■□□□□ 0.32
SSR4-207ENST00000471724 EAPPQ56P03 285 aaPredicted RBP17.04■□□□□ 0.32
SSR4-207ENST00000471724 TBC1D9Q6ZT07 1266 aa17.04■□□□□ 0.32
SSR4-207ENST00000471724 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.04■□□□□ 0.32
SSR4-207ENST00000471724 MYOZ2Q9NPC6 264 aa17.04■□□□□ 0.32
SSR4-207ENST00000471724 PIH1D3Q9NQM4 214 aaKnown RBP17.04■□□□□ 0.32
SSR4-207ENST00000471724 NDUFB9Q9Y6M9 179 aa17.04■□□□□ 0.32
SSR4-207ENST00000471724 RFX7Q2KHR2 1363 aa17.03■□□□□ 0.32
SSR4-207ENST00000471724 CDK5RAP2Q96SN8 1893 aa17.03■□□□□ 0.32
SSR4-207ENST00000471724 FOCADQ5VW36 1801 aa17.03■□□□□ 0.32
SSR4-207ENST00000471724 EPS15P42566 896 aa17.03■□□□□ 0.32
SSR4-207ENST00000471724 GRIK5Q16478 980 aa17.03■□□□□ 0.32
SSR4-207ENST00000471724 KIF4BQ2VIQ3 1234 aa17.03■□□□□ 0.32
SSR4-207ENST00000471724 USP50Q70EL3 339 aaPredicted RBP17.03■□□□□ 0.32
SSR4-207ENST00000471724 MRIQ9BWK5 157 aa17.03■□□□□ 0.32
SSR4-207ENST00000471724 ANTXR1Q9H6X2 564 aa17.03■□□□□ 0.32
SSR4-207ENST00000471724 LDHCP07864 332 aa17.02■□□□□ 0.32
SSR4-207ENST00000471724 CRKP46108 304 aa17.02■□□□□ 0.32
SSR4-207ENST00000471724 MECOMQ03112 1051 aa17.02■□□□□ 0.32
SSR4-207ENST00000471724 DLGAP5Q15398 846 aa17.02■□□□□ 0.32
SSR4-207ENST00000471724 ZSCAN25Q6NSZ9 544 aa17.02■□□□□ 0.32
SSR4-207ENST00000471724 HHIPL2Q6UWX4 724 aa17.02■□□□□ 0.32
SSR4-207ENST00000471724 CNTROBQ8N137 903 aa17.02■□□□□ 0.32
SSR4-207ENST00000471724 KBTBD3Q8NAB2 608 aa17.02■□□□□ 0.32
SSR4-207ENST00000471724 MTMR14Q8NCE2 650 aa17.02■□□□□ 0.32
SSR4-207ENST00000471724 EVI5LQ96CN4 794 aa17.02■□□□□ 0.32
SSR4-207ENST00000471724 MROH7-TTC4A0A0A0MT08 1334 aa17.01■□□□□ 0.31
SSR4-207ENST00000471724 GAKO14976 1311 aa17.01■□□□□ 0.31
SSR4-207ENST00000471724 SHTN1A0MZ66 631 aa17.01■□□□□ 0.31
SSR4-207ENST00000471724 RBM5P52756 815 aaKnown RBP eCLIP17.01■□□□□ 0.31
SSR4-207ENST00000471724 CFAP100Q494V2 611 aa17.01■□□□□ 0.31
SSR4-207ENST00000471724 TTC22Q5TAA0 569 aa17.01■□□□□ 0.31
SSR4-207ENST00000471724 NAA16Q6N069 864 aaPredicted RBP17.01■□□□□ 0.31
SSR4-207ENST00000471724 TICAM2Q86XR7 235 aa17.01■□□□□ 0.31
SSR4-207ENST00000471724 NSUN4Q96CB9 384 aaKnown RBP17.01■□□□□ 0.31
SSR4-207ENST00000471724 EDC3Q96F86 508 aaKnown RBP17.01■□□□□ 0.31
SSR4-207ENST00000471724 ZDHHC15Q96MV8 337 aa17.01■□□□□ 0.31
SSR4-207ENST00000471724 CLEC11AQ9Y240 323 aa17.01■□□□□ 0.31
SSR4-207ENST00000471724 GTF3C3Q9Y5Q9 886 aa17.01■□□□□ 0.31
SSR4-207ENST00000471724 MYO1BO43795 1136 aa17■□□□□ 0.31
SSR4-207ENST00000471724 ZFYP08048 801 aaPredicted RBP17■□□□□ 0.31
SSR4-207ENST00000471724 DIXDC1Q155Q3 683 aa17■□□□□ 0.31
SSR4-207ENST00000471724 TBC1D10BQ4KMP7 808 aaPredicted RBP17■□□□□ 0.31
SSR4-207ENST00000471724 SAMD7Q7Z3H4 446 aa17■□□□□ 0.31
SSR4-207ENST00000471724 CERS3Q8IU89 383 aa17■□□□□ 0.31
SSR4-207ENST00000471724 TRPM4Q8TD43 1214 aa17■□□□□ 0.31
SSR4-207ENST00000471724 NOL10Q9BSC4 688 aaKnown RBP17■□□□□ 0.31
SSR4-207ENST00000471724 FSD1Q9BTV5 496 aa17■□□□□ 0.31
SSR4-207ENST00000471724 SPDYE2BA6NHP3 402 aa16.99■□□□□ 0.31
SSR4-207ENST00000471724 TRIM6-TRIM34B2RNG4 842 aa16.99■□□□□ 0.31
SSR4-207ENST00000471724 POTEIP0CG38 1075 aa16.99■□□□□ 0.31
SSR4-207ENST00000471724 POTEJP0CG39 1038 aa16.99■□□□□ 0.31
SSR4-207ENST00000471724 SPDYE6P0CI01 402 aa16.99■□□□□ 0.31
SSR4-207ENST00000471724 PDE6AP16499 860 aa16.99■□□□□ 0.31
SSR4-207ENST00000471724 FAM163AQ96GL9 167 aaPredicted RBP16.99■□□□□ 0.31
SSR4-207ENST00000471724 DAGLAQ9Y4D2 1042 aa16.99■□□□□ 0.31
SSR4-207ENST00000471724 NAV1Q8NEY1 1877 aa16.99■□□□□ 0.31
SSR4-207ENST00000471724 POLR2AP24928 1970 aaKnown RBP16.98■□□□□ 0.31
SSR4-207ENST00000471724 WNT10BO00744 389 aa16.98■□□□□ 0.31
SSR4-207ENST00000471724 MAP4K4O95819 1239 aaPredicted RBP16.98■□□□□ 0.31
SSR4-207ENST00000471724 RGS3P49796 1198 aa16.98■□□□□ 0.31
SSR4-207ENST00000471724 RBM26Q5T8P6 1007 aaKnown RBP16.98■□□□□ 0.31
SSR4-207ENST00000471724 SLC9C2Q5TAH2 1124 aa16.98■□□□□ 0.31
SSR4-207ENST00000471724 MAGEB6Q8N7X4 407 aa16.98■□□□□ 0.31
SSR4-207ENST00000471724 ZC3H15Q8WU90 426 aaKnown RBP16.98■□□□□ 0.31
SSR4-207ENST00000471724 ZBED3Q96IU2 234 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms