RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 PODXL2Q9NZ53 605 aa11.06□□□□□ -0.64
PTPRE-207ENST00000471218 TSKSQ9UJT2 592 aa11.06□□□□□ -0.64
PTPRE-207ENST00000471218 A0A1B0GUL7 405 aa11.05□□□□□ -0.64
PTPRE-207ENST00000471218 TRIM6-TRIM34B2RNG4 842 aa11.05□□□□□ -0.64
PTPRE-207ENST00000471218 ECE2O60344 883 aa11.05□□□□□ -0.64
PTPRE-207ENST00000471218 UQCRFS1P1P0C7P4 283 aa11.05□□□□□ -0.64
PTPRE-207ENST00000471218 BECN1Q14457 450 aa11.05□□□□□ -0.64
PTPRE-207ENST00000471218 ATP2B3Q16720 1220 aa11.05□□□□□ -0.64
PTPRE-207ENST00000471218 TBC1D10BQ4KMP7 808 aaPredicted RBP11.05□□□□□ -0.64
PTPRE-207ENST00000471218 LRRC24Q50LG9 513 aa11.05□□□□□ -0.64
PTPRE-207ENST00000471218 SAMD7Q7Z3H4 446 aa11.05□□□□□ -0.64
PTPRE-207ENST00000471218 ANKRD18AQ8IVF6 992 aa11.05□□□□□ -0.64
PTPRE-207ENST00000471218 DBNDD1Q9H9R9 158 aa11.05□□□□□ -0.64
PTPRE-207ENST00000471218 ANKIB1Q9P2G1 1089 aa11.05□□□□□ -0.64
PTPRE-207ENST00000471218 ZBTB12Q9Y330 459 aaPredicted RBP11.05□□□□□ -0.64
PTPRE-207ENST00000471218 RIMBP2O15034 1052 aa11.04□□□□□ -0.64
PTPRE-207ENST00000471218 SEC24BO95487 1268 aa11.04□□□□□ -0.64
PTPRE-207ENST00000471218 ZFYP08048 801 aaPredicted RBP11.04□□□□□ -0.64
PTPRE-207ENST00000471218 IFIT1P09914 478 aaKnown RBP11.04□□□□□ -0.64
PTPRE-207ENST00000471218 SLC5A1P13866 664 aa11.04□□□□□ -0.64
PTPRE-207ENST00000471218 FGFR2P21802 821 aa11.04□□□□□ -0.64
PTPRE-207ENST00000471218 MCCP23508 829 aa11.04□□□□□ -0.64
PTPRE-207ENST00000471218 MFAP1P55081 439 aaKnown RBP11.04□□□□□ -0.64
PTPRE-207ENST00000471218 KIF23Q02241 960 aaPredicted RBP11.04□□□□□ -0.64
PTPRE-207ENST00000471218 UBE4AQ14139 1066 aa11.04□□□□□ -0.64
PTPRE-207ENST00000471218 KIF4BQ2VIQ3 1234 aa11.04□□□□□ -0.64
PTPRE-207ENST00000471218 RBM26Q5T8P6 1007 aaKnown RBP11.04□□□□□ -0.64
PTPRE-207ENST00000471218 PODNQ7Z5L7 613 aa11.04□□□□□ -0.64
PTPRE-207ENST00000471218 TBC1D16Q8TBP0 767 aa11.04□□□□□ -0.64
PTPRE-207ENST00000471218 DBNDD2Q9BQY9 259 aa11.04□□□□□ -0.64
PTPRE-207ENST00000471218 ANKRD2Q9GZV1 360 aa11.04□□□□□ -0.64
PTPRE-207ENST00000471218 CCDC8Q9H0W5 538 aaPredicted RBP11.04□□□□□ -0.64
PTPRE-207ENST00000471218 DIAPH3Q9NSV4 1193 aa11.04□□□□□ -0.64
PTPRE-207ENST00000471218 POLLQ9UGP5 575 aa11.04□□□□□ -0.64
PTPRE-207ENST00000471218 GGA1Q9UJY5 639 aa11.04□□□□□ -0.64
PTPRE-207ENST00000471218 PDS5AQ29RF7 1337 aaKnown RBP11.04□□□□□ -0.64
PTPRE-207ENST00000471218 PITPNM2Q9BZ72 1349 aa11.04□□□□□ -0.64
PTPRE-207ENST00000471218 CASP8AP2Q9UKL3 1982 aa11.03□□□□□ -0.64
PTPRE-207ENST00000471218 FAM155AB1AL88 458 aaPredicted RBP11.03□□□□□ -0.64
PTPRE-207ENST00000471218 SGSM2O43147 1006 aa11.03□□□□□ -0.64
PTPRE-207ENST00000471218 ARID4AP29374 1257 aaPredicted RBP11.03□□□□□ -0.64
PTPRE-207ENST00000471218 NF2P35240 595 aa11.03□□□□□ -0.64
PTPRE-207ENST00000471218 TTF1Q15361 905 aaPredicted RBP11.03□□□□□ -0.64
PTPRE-207ENST00000471218 CTU1Q7Z7A3 348 aaKnown RBP11.03□□□□□ -0.64
PTPRE-207ENST00000471218 OGFOD1Q8N543 542 aa11.03□□□□□ -0.64
PTPRE-207ENST00000471218 KBTBD3Q8NAB2 608 aa11.03□□□□□ -0.64
PTPRE-207ENST00000471218 CELF1Q92879 486 aaKnown RBP11.03□□□□□ -0.64
PTPRE-207ENST00000471218 RILPL2Q969X0 211 aa11.03□□□□□ -0.64
PTPRE-207ENST00000471218 ZNF594Q96JF6 807 aaPredicted RBP11.03□□□□□ -0.64
PTPRE-207ENST00000471218 USP26Q9BXU7 913 aa11.03□□□□□ -0.64
PTPRE-207ENST00000471218 PUS3Q9BZE2 481 aaKnown RBP11.03□□□□□ -0.64
PTPRE-207ENST00000471218 RNF186Q9NXI6 227 aa11.03□□□□□ -0.64
PTPRE-207ENST00000471218 PDE4DIPQ5VU43 2346 aa11.03□□□□□ -0.64
PTPRE-207ENST00000471218 ARAP2Q8WZ64 1704 aa11.02□□□□□ -0.65
PTPRE-207ENST00000471218 SEMA3EO15041 775 aa11.02□□□□□ -0.65
PTPRE-207ENST00000471218 TRPA1O75762 1119 aa11.02□□□□□ -0.65
PTPRE-207ENST00000471218 SLC10A3P09131 477 aa11.02□□□□□ -0.65
PTPRE-207ENST00000471218 USP17L8P0C7I0 530 aa11.02□□□□□ -0.65
PTPRE-207ENST00000471218 ATP2B4P23634 1241 aa11.02□□□□□ -0.65
PTPRE-207ENST00000471218 ZNF280AP59817 542 aaPredicted RBP11.02□□□□□ -0.65
PTPRE-207ENST00000471218 GPSM2P81274 684 aa11.02□□□□□ -0.65
PTPRE-207ENST00000471218 RABEP1Q15276 862 aa11.02□□□□□ -0.65
PTPRE-207ENST00000471218 GORABQ5T7V8 394 aa11.02□□□□□ -0.65
PTPRE-207ENST00000471218 TSHZ3Q63HK5 1081 aa11.02□□□□□ -0.65
PTPRE-207ENST00000471218 RSBN1LQ6PCB5 846 aaPredicted RBP11.02□□□□□ -0.65
PTPRE-207ENST00000471218 SNX21Q969T3 373 aa11.02□□□□□ -0.65
PTPRE-207ENST00000471218 XAGE2Q96GT9 111 aa11.02□□□□□ -0.65
PTPRE-207ENST00000471218 TLR7Q9NYK1 1049 aaKnown RBP11.02□□□□□ -0.65
PTPRE-207ENST00000471218 UFL1O94874 794 aa11.01□□□□□ -0.65
PTPRE-207ENST00000471218 DOK7Q18PE1 504 aa11.01□□□□□ -0.65
PTPRE-207ENST00000471218 NOM1Q5C9Z4 860 aaKnown RBP11.01□□□□□ -0.65
PTPRE-207ENST00000471218 ZSCAN25Q6NSZ9 544 aa11.01□□□□□ -0.65
PTPRE-207ENST00000471218 KIAA1211Q6ZU35 1233 aa11.01□□□□□ -0.65
PTPRE-207ENST00000471218 NEUROD6Q96NK8 337 aa11.01□□□□□ -0.65
PTPRE-207ENST00000471218 CSRNP1Q96S65 589 aa11.01□□□□□ -0.65
PTPRE-207ENST00000471218 PAG1Q9NWQ8 432 aa11.01□□□□□ -0.65
PTPRE-207ENST00000471218 GGA3Q9NZ52 723 aa11.01□□□□□ -0.65
PTPRE-207ENST00000471218 HDAC9Q9UKV0 1011 aa11.01□□□□□ -0.65
PTPRE-207ENST00000471218 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.01□□□□□ -0.65
PTPRE-207ENST00000471218 ZNF804BA4D1E1 1349 aa11.01□□□□□ -0.65
PTPRE-207ENST00000471218 XDHP47989 1333 aa11.01□□□□□ -0.65
PTPRE-207ENST00000471218 MYO3BQ8WXR4 1341 aa11.01□□□□□ -0.65
PTPRE-207ENST00000471218 MED23Q9ULK4 1368 aa11.01□□□□□ -0.65
PTPRE-207ENST00000471218 USP17L3A6NCW0 530 aa11□□□□□ -0.65
PTPRE-207ENST00000471218 USP17L4A6NCW7 530 aa11□□□□□ -0.65
PTPRE-207ENST00000471218 TIMM10P62072 90 aa11□□□□□ -0.65
PTPRE-207ENST00000471218 SCARF1Q14162 830 aa11□□□□□ -0.65
PTPRE-207ENST00000471218 TTC39AQ5SRH9 613 aa11□□□□□ -0.65
PTPRE-207ENST00000471218 C15orf52Q6ZUT6 534 aaKnown RBP11□□□□□ -0.65
PTPRE-207ENST00000471218 USP17L1Q7RTZ2 530 aa11□□□□□ -0.65
PTPRE-207ENST00000471218 CDCA5Q96FF9 252 aa11□□□□□ -0.65
PTPRE-207ENST00000471218 FSD1Q9BTV5 496 aa11□□□□□ -0.65
PTPRE-207ENST00000471218 DDX24Q9GZR7 859 aaKnown RBP eCLIP11□□□□□ -0.65
PTPRE-207ENST00000471218 BOLA2Q9H3K6 86 aa11□□□□□ -0.65
PTPRE-207ENST00000471218 HELLSQ9NRZ9 838 aa11□□□□□ -0.65
PTPRE-207ENST00000471218 GNL3LQ9NVN8 582 aaKnown RBP11□□□□□ -0.65
PTPRE-207ENST00000471218 DAXXQ9UER7 740 aaPredicted RBP11□□□□□ -0.65
PTPRE-207ENST00000471218 SHTN1A0MZ66 631 aa10.99□□□□□ -0.65
PTPRE-207ENST00000471218 ADM5C9JUS6 153 aa10.99□□□□□ -0.65
PTPRE-207ENST00000471218 ALDH1A1P00352 501 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms