RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 UBTFL1P0CB47 393 aaPredicted RBP6.93□□□□□ -1.3
HDAC8-216ENST00000470998 HSPA6P17066 643 aa6.93□□□□□ -1.3
HDAC8-216ENST00000470998 CHRNA5P30532 468 aa6.93□□□□□ -1.3
HDAC8-216ENST00000470998 MTX1Q13505 466 aa6.93□□□□□ -1.3
HDAC8-216ENST00000470998 KRT24Q2M2I5 525 aa6.93□□□□□ -1.3
HDAC8-216ENST00000470998 TTC22Q5TAA0 569 aa6.93□□□□□ -1.3
HDAC8-216ENST00000470998 C9orf131Q5VYM1 1079 aa6.93□□□□□ -1.3
HDAC8-216ENST00000470998 TBC1D9BQ66K14 1250 aa6.93□□□□□ -1.3
HDAC8-216ENST00000470998 PTCRAQ6ISU1 281 aaPredicted RBP6.93□□□□□ -1.3
HDAC8-216ENST00000470998 DZIP3Q86Y13 1208 aaKnown RBP6.93□□□□□ -1.3
HDAC8-216ENST00000470998 HSCBQ8IWL3 235 aa6.93□□□□□ -1.3
HDAC8-216ENST00000470998 CYP4X1Q8N118 509 aa6.93□□□□□ -1.3
HDAC8-216ENST00000470998 TTLL6Q8N841 843 aa6.93□□□□□ -1.3
HDAC8-216ENST00000470998 EHBP1Q8NDI1 1231 aa6.93□□□□□ -1.3
HDAC8-216ENST00000470998 SETDB2Q96T68 719 aa6.93□□□□□ -1.3
HDAC8-216ENST00000470998 MEIS3Q99687 375 aa6.93□□□□□ -1.3
HDAC8-216ENST00000470998 ZNF652Q9Y2D9 606 aa6.93□□□□□ -1.3
HDAC8-216ENST00000470998 KIAA1551Q9HCM1 1747 aa6.93□□□□□ -1.3
HDAC8-216ENST00000470998 KDM3BQ7LBC6 1761 aa6.92□□□□□ -1.3
HDAC8-216ENST00000470998 UBR2Q8IWV8 1755 aa6.92□□□□□ -1.3
HDAC8-216ENST00000470998 TTC24A2A3L6 582 aaPredicted RBP6.92□□□□□ -1.3
HDAC8-216ENST00000470998 APBB1O00213 710 aa6.92□□□□□ -1.3
HDAC8-216ENST00000470998 WNT7AO00755 349 aa6.92□□□□□ -1.3
HDAC8-216ENST00000470998 NRG2O14511 850 aaPredicted RBP6.92□□□□□ -1.3
HDAC8-216ENST00000470998 KCNQ3O43525 872 aa6.92□□□□□ -1.3
HDAC8-216ENST00000470998 CAMTA2O94983 1202 aa6.92□□□□□ -1.3
HDAC8-216ENST00000470998 A1BGP04217 495 aa6.92□□□□□ -1.3
HDAC8-216ENST00000470998 PTMSP20962 102 aa6.92□□□□□ -1.3
HDAC8-216ENST00000470998 MFAP1P55081 439 aaKnown RBP6.92□□□□□ -1.3
HDAC8-216ENST00000470998 ST5P78524 1137 aa6.92□□□□□ -1.3
HDAC8-216ENST00000470998 PRR20EP86478 221 aa6.92□□□□□ -1.3
HDAC8-216ENST00000470998 PRR20CP86479 221 aa6.92□□□□□ -1.3
HDAC8-216ENST00000470998 PRR20DP86480 221 aa6.92□□□□□ -1.3
HDAC8-216ENST00000470998 PRR20BP86481 221 aa6.92□□□□□ -1.3
HDAC8-216ENST00000470998 PRR20AP86496 221 aa6.92□□□□□ -1.3
HDAC8-216ENST00000470998 ATP8B2P98198 1209 aa6.92□□□□□ -1.3
HDAC8-216ENST00000470998 SLC4A10Q6U841 1118 aa6.92□□□□□ -1.3
HDAC8-216ENST00000470998 Q6ZNB5 142 aa6.92□□□□□ -1.3
HDAC8-216ENST00000470998 C2CD5Q86YS7 1000 aa6.92□□□□□ -1.3
HDAC8-216ENST00000470998 ZNF526Q8TF50 670 aaPredicted RBP6.92□□□□□ -1.3
HDAC8-216ENST00000470998 LRRN4Q8WUT4 740 aa6.92□□□□□ -1.3
HDAC8-216ENST00000470998 DNAAF4Q8WXU2 420 aa6.92□□□□□ -1.3
HDAC8-216ENST00000470998 BAP1Q92560 729 aa6.92□□□□□ -1.3
HDAC8-216ENST00000470998 LRRCC1Q9C099 1032 aa6.92□□□□□ -1.3
HDAC8-216ENST00000470998 C1orf115Q9H7X2 142 aa6.92□□□□□ -1.3
HDAC8-216ENST00000470998 RNF181Q9P0P0 153 aa6.92□□□□□ -1.3
HDAC8-216ENST00000470998 TBC1D2BQ9UPU7 963 aa6.92□□□□□ -1.3
HDAC8-216ENST00000470998 USP16Q9Y5T5 823 aa6.92□□□□□ -1.3
HDAC8-216ENST00000470998 NPHP1O15259 732 aa6.91□□□□□ -1.3
HDAC8-216ENST00000470998 LMNB1P20700 586 aa6.91□□□□□ -1.3
HDAC8-216ENST00000470998 SOGA3Q5TF21 947 aa6.91□□□□□ -1.3
HDAC8-216ENST00000470998 STYK1Q6J9G0 422 aa6.91□□□□□ -1.3
HDAC8-216ENST00000470998 PRR5LQ6MZQ0 368 aa6.91□□□□□ -1.3
HDAC8-216ENST00000470998 BICDL1Q6ZP65 573 aa6.91□□□□□ -1.3
HDAC8-216ENST00000470998 TBC1D9Q6ZT07 1266 aa6.91□□□□□ -1.3
HDAC8-216ENST00000470998 ERC1Q8IUD2 1116 aa6.91□□□□□ -1.3
HDAC8-216ENST00000470998 PLEKHM2Q8IWE5 1019 aa6.91□□□□□ -1.3
HDAC8-216ENST00000470998 C16orf71Q8IYS4 520 aaPredicted RBP6.91□□□□□ -1.3
HDAC8-216ENST00000470998 CNBD1Q8NA66 436 aa6.91□□□□□ -1.3
HDAC8-216ENST00000470998 ZNF511Q8NB15 262 aa6.91□□□□□ -1.3
HDAC8-216ENST00000470998 SSH3Q8TE77 659 aa6.91□□□□□ -1.3
HDAC8-216ENST00000470998 CNKSR1Q969H4 720 aa6.91□□□□□ -1.3
HDAC8-216ENST00000470998 DDX21Q9NR30 783 aaKnown RBP eCLIP6.91□□□□□ -1.3
HDAC8-216ENST00000470998 ZNF330Q9Y3S2 320 aaPredicted RBP6.91□□□□□ -1.3
HDAC8-216ENST00000470998 UTRNP46939 3433 aa6.91□□□□□ -1.3
HDAC8-216ENST00000470998 NRXN2Q9P2S2 1712 aa6.9□□□□□ -1.3
HDAC8-216ENST00000470998 FAM187AA6NFU0 413 aa6.9□□□□□ -1.3
HDAC8-216ENST00000470998 ERVV-1B6SEH8 477 aa6.9□□□□□ -1.3
HDAC8-216ENST00000470998 FSTL1Q12841 308 aa6.9□□□□□ -1.3
HDAC8-216ENST00000470998 RABEP1Q15276 862 aa6.9□□□□□ -1.3
HDAC8-216ENST00000470998 PKDCCQ504Y2 493 aa6.9□□□□□ -1.3
HDAC8-216ENST00000470998 BEND3Q5T5X7 828 aa6.9□□□□□ -1.3
HDAC8-216ENST00000470998 KSR2Q6VAB6 950 aa6.9□□□□□ -1.3
HDAC8-216ENST00000470998 TPTE2Q6XPS3 522 aa6.9□□□□□ -1.3
HDAC8-216ENST00000470998 G2E3Q7L622 706 aa6.9□□□□□ -1.3
HDAC8-216ENST00000470998 LINS1Q8NG48 757 aa6.9□□□□□ -1.3
HDAC8-216ENST00000470998 ZNF622Q969S3 477 aaKnown RBP eCLIP6.9□□□□□ -1.3
HDAC8-216ENST00000470998 KIF1BPQ96EK5 621 aa6.9□□□□□ -1.3
HDAC8-216ENST00000470998 MASTLQ96GX5 879 aa6.9□□□□□ -1.3
HDAC8-216ENST00000470998 GPATCH3Q96I76 525 aa6.9□□□□□ -1.3
HDAC8-216ENST00000470998 MIS18AQ9NYP9 233 aa6.9□□□□□ -1.3
HDAC8-216ENST00000470998 STAP2Q9UGK3 403 aa6.9□□□□□ -1.3
HDAC8-216ENST00000470998 UTYO14607 1347 aa6.9□□□□□ -1.3
HDAC8-216ENST00000470998 LTBP3Q9NS15 1303 aa6.9□□□□□ -1.3
HDAC8-216ENST00000470998 GLTPD2A6NH11 291 aa6.89□□□□□ -1.31
HDAC8-216ENST00000470998 GDF9O60383 454 aa6.89□□□□□ -1.31
HDAC8-216ENST00000470998 SRGNP10124 158 aa6.89□□□□□ -1.31
HDAC8-216ENST00000470998 GSPT1P15170 499 aaKnown RBP6.89□□□□□ -1.31
HDAC8-216ENST00000470998 MX1P20591 662 aa6.89□□□□□ -1.31
HDAC8-216ENST00000470998 MCCP23508 829 aa6.89□□□□□ -1.31
HDAC8-216ENST00000470998 MCM2P49736 904 aa6.89□□□□□ -1.31
HDAC8-216ENST00000470998 ANAPC15P60006 121 aa6.89□□□□□ -1.31
HDAC8-216ENST00000470998 NEXNQ0ZGT2 675 aa6.89□□□□□ -1.31
HDAC8-216ENST00000470998 NR6A1Q15406 480 aa6.89□□□□□ -1.31
HDAC8-216ENST00000470998 BPHLQ86WA6 291 aaPredicted RBP6.89□□□□□ -1.31
HDAC8-216ENST00000470998 NBPF5PQ86XG9 351 aaPredicted RBP6.89□□□□□ -1.31
HDAC8-216ENST00000470998 TICAM2Q86XR7 235 aa6.89□□□□□ -1.31
HDAC8-216ENST00000470998 MRGPRX2Q96LB1 330 aa6.89□□□□□ -1.31
HDAC8-216ENST00000470998 USP44Q9H0E7 712 aa6.89□□□□□ -1.31
HDAC8-216ENST00000470998 NMRK2Q9NPI5 230 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms