RNA–Protein interactions for RNA: ENST00000470980.1

GREB1-208, Transcript of growth regulating estrogen receptor binding 1, human

TSL 3

Gene GREB1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GREB1-208	ENST00000470980	FRAT2	O75474	233 aa	Predicted RBP	11.14	□□□□□ -0.63
GREB1-208	ENST00000470980	ITGBL1	O95965	494 aa	Predicted RBP	11.14	□□□□□ -0.63
GREB1-208	ENST00000470980	KLRK1	P26718	216 aa		11.14	□□□□□ -0.63
GREB1-208	ENST00000470980	HIBADH	P31937	336 aa	Known RBP	11.14	□□□□□ -0.63
GREB1-208	ENST00000470980	GPSM2	P81274	684 aa		11.14	□□□□□ -0.63
GREB1-208	ENST00000470980	MAP3K12	Q12852	859 aa		11.14	□□□□□ -0.63
GREB1-208	ENST00000470980	GRIPAP1	Q4V328	841 aa		11.14	□□□□□ -0.63
GREB1-208	ENST00000470980	SLC9C2	Q5TAH2	1124 aa		11.14	□□□□□ -0.63
GREB1-208	ENST00000470980	FBXO33	Q7Z6M2	555 aa		11.14	□□□□□ -0.63
GREB1-208	ENST00000470980	LDHD	Q86WU2	507 aa		11.14	□□□□□ -0.63
GREB1-208	ENST00000470980	APPBP2	Q92624	585 aa		11.14	□□□□□ -0.63
GREB1-208	ENST00000470980	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.14	□□□□□ -0.63
GREB1-208	ENST00000470980	DENND2A	Q9ULE3	1009 aa		11.14	□□□□□ -0.63
GREB1-208	ENST00000470980	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.14	□□□□□ -0.63
GREB1-208	ENST00000470980	SNX14	Q9Y5W7	946 aa		11.14	□□□□□ -0.63
GREB1-208	ENST00000470980	SEMA3E	O15041	775 aa		11.13	□□□□□ -0.63
GREB1-208	ENST00000470980	UFL1	O94874	794 aa		11.13	□□□□□ -0.63
GREB1-208	ENST00000470980	PDE6A	P16499	860 aa		11.13	□□□□□ -0.63
GREB1-208	ENST00000470980	ZKSCAN1	P17029	563 aa	Predicted RBP	11.13	□□□□□ -0.63
GREB1-208	ENST00000470980	ADD2	P35612	726 aa		11.13	□□□□□ -0.63
GREB1-208	ENST00000470980	IARS	P41252	1262 aa	Known RBP	11.13	□□□□□ -0.63
GREB1-208	ENST00000470980	NEK4	P51957	841 aa		11.13	□□□□□ -0.63
GREB1-208	ENST00000470980	RNF20	Q5VTR2	975 aa		11.13	□□□□□ -0.63
GREB1-208	ENST00000470980	CREB3L3	Q68CJ9	461 aa		11.13	□□□□□ -0.63
GREB1-208	ENST00000470980	SLC51A	Q86UW1	340 aa		11.13	□□□□□ -0.63
GREB1-208	ENST00000470980	OSBP2	Q969R2	916 aa		11.13	□□□□□ -0.63
GREB1-208	ENST00000470980	LRP2BP	Q9P2M1	347 aa		11.13	□□□□□ -0.63
GREB1-208	ENST00000470980	GGA1	Q9UJY5	639 aa		11.13	□□□□□ -0.63
GREB1-208	ENST00000470980	AKAP11	Q9UKA4	1901 aa		11.13	□□□□□ -0.63
GREB1-208	ENST00000470980	ZNF541	Q9H0D2	1346 aa		11.12	□□□□□ -0.63
GREB1-208	ENST00000470980	ZNF532	Q9HCE3	1301 aa		11.12	□□□□□ -0.63
GREB1-208	ENST00000470980		K7ELQ4	463 aa	Predicted RBP	11.12	□□□□□ -0.63
GREB1-208	ENST00000470980	SLC27A2	O14975	620 aa		11.12	□□□□□ -0.63
GREB1-208	ENST00000470980	CD2BP2	O95400	341 aa	Known RBP	11.12	□□□□□ -0.63
GREB1-208	ENST00000470980	ATP2B4	P23634	1241 aa		11.12	□□□□□ -0.63
GREB1-208	ENST00000470980	NECTIN1	Q15223	517 aa		11.12	□□□□□ -0.63
GREB1-208	ENST00000470980	UBE3C	Q15386	1083 aa		11.12	□□□□□ -0.63
GREB1-208	ENST00000470980	OLFM4	Q6UX06	510 aa		11.12	□□□□□ -0.63
GREB1-208	ENST00000470980	SP8	Q8IXZ3	490 aa		11.12	□□□□□ -0.63
GREB1-208	ENST00000470980	RASEF	Q8IZ41	740 aa		11.12	□□□□□ -0.63
GREB1-208	ENST00000470980	GPC2	Q8N158	579 aa		11.12	□□□□□ -0.63
GREB1-208	ENST00000470980	MAGEB6	Q8N7X4	407 aa		11.12	□□□□□ -0.63
GREB1-208	ENST00000470980	IL17RA	Q96F46	866 aa		11.12	□□□□□ -0.63
GREB1-208	ENST00000470980	TMX4	Q9H1E5	349 aa	Predicted RBP	11.12	□□□□□ -0.63
GREB1-208	ENST00000470980	ABCF2	Q9UG63	623 aa		11.12	□□□□□ -0.63
GREB1-208	ENST00000470980	ATP6V0A2	Q9Y487	856 aa		11.12	□□□□□ -0.63
GREB1-208	ENST00000470980	CNTNAP1	P78357	1384 aa		11.12	□□□□□ -0.63
GREB1-208	ENST00000470980	COL4A5	P29400	1685 aa		11.11	□□□□□ -0.63
GREB1-208	ENST00000470980	C6orf229	H3BNL8	230 aa		11.11	□□□□□ -0.63
GREB1-208	ENST00000470980	HSP90AA1	P07900	732 aa	Known RBP	11.11	□□□□□ -0.63
GREB1-208	ENST00000470980	HSPA1A	P0DMV8	641 aa	Known RBP	11.11	□□□□□ -0.63
GREB1-208	ENST00000470980	HSPA1B	P0DMV9	641 aa	Known RBP	11.11	□□□□□ -0.63
GREB1-208	ENST00000470980	CHAF1A	Q13111	956 aa	Predicted RBP	11.11	□□□□□ -0.63
GREB1-208	ENST00000470980	ZNF804A	Q7Z570	1209 aa		11.11	□□□□□ -0.63
GREB1-208	ENST00000470980	PNMA8A	Q86V59	439 aa	Predicted RBP	11.11	□□□□□ -0.63
GREB1-208	ENST00000470980	SPRYD3	Q8NCJ5	442 aa		11.11	□□□□□ -0.63
GREB1-208	ENST00000470980	KCNB2	Q92953	911 aa		11.11	□□□□□ -0.63
GREB1-208	ENST00000470980	JAKMIP1	Q96N16	626 aa	Known RBP	11.11	□□□□□ -0.63
GREB1-208	ENST00000470980	GPR101	Q96P66	508 aa	Predicted RBP	11.11	□□□□□ -0.63
GREB1-208	ENST00000470980	DSCC1	Q9BVC3	393 aa		11.11	□□□□□ -0.63
GREB1-208	ENST00000470980	UPF3B	Q9BZI7	483 aa	Known RBP	11.11	□□□□□ -0.63
GREB1-208	ENST00000470980	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.11	□□□□□ -0.63
GREB1-208	ENST00000470980	RAI14	Q9P0K7	980 aa		11.11	□□□□□ -0.63
GREB1-208	ENST00000470980	HACL1	Q9UJ83	578 aa		11.11	□□□□□ -0.63
GREB1-208	ENST00000470980	GPAA1	O43292	621 aa		11.1	□□□□□ -0.63
GREB1-208	ENST00000470980	HSPD1	P10809	573 aa	Known RBP	11.1	□□□□□ -0.63
GREB1-208	ENST00000470980	VPS53	Q5VIR6	699 aa		11.1	□□□□□ -0.63
GREB1-208	ENST00000470980	C15orf52	Q6ZUT6	534 aa	Known RBP	11.1	□□□□□ -0.63
GREB1-208	ENST00000470980	TXNRD3	Q86VQ6	643 aa		11.1	□□□□□ -0.63
GREB1-208	ENST00000470980	TBC1D16	Q8TBP0	767 aa		11.1	□□□□□ -0.63
GREB1-208	ENST00000470980	PUS7L	Q9H0K6	701 aa	Known RBP	11.1	□□□□□ -0.63
GREB1-208	ENST00000470980	VPS33B	Q9H267	617 aa		11.1	□□□□□ -0.63
GREB1-208	ENST00000470980	PODXL2	Q9NZ53	605 aa		11.1	□□□□□ -0.63
GREB1-208	ENST00000470980	COL1A1	P02452	1464 aa	Predicted RBP	11.1	□□□□□ -0.63
GREB1-208	ENST00000470980	PDS5A	Q29RF7	1337 aa	Known RBP	11.09	□□□□□ -0.63
GREB1-208	ENST00000470980	IRS2	Q9Y4H2	1338 aa		11.09	□□□□□ -0.63
GREB1-208	ENST00000470980	TCRBV5S4A2T	A0A5A2	114 aa		11.09	□□□□□ -0.63
GREB1-208	ENST00000470980	CAST	P20810	708 aa	Known RBP	11.09	□□□□□ -0.63
GREB1-208	ENST00000470980	CYP7A1	P22680	504 aa		11.09	□□□□□ -0.63
GREB1-208	ENST00000470980	PSMA5	P28066	241 aa		11.09	□□□□□ -0.63
GREB1-208	ENST00000470980	EPHX2	P34913	555 aa		11.09	□□□□□ -0.63
GREB1-208	ENST00000470980	MCM2	P49736	904 aa		11.09	□□□□□ -0.63
GREB1-208	ENST00000470980	KRT32	Q14532	448 aa		11.09	□□□□□ -0.63
GREB1-208	ENST00000470980	IL27	Q8NEV9	243 aa		11.09	□□□□□ -0.63
GREB1-208	ENST00000470980	AIDA	Q96BJ3	306 aa		11.09	□□□□□ -0.63
GREB1-208	ENST00000470980	TM6SF1	Q9BZW5	370 aa		11.09	□□□□□ -0.63
GREB1-208	ENST00000470980	SLK	Q9H2G2	1235 aa	Predicted RBP	11.09	□□□□□ -0.63
GREB1-208	ENST00000470980	CTNNA3	Q9UI47	895 aa		11.09	□□□□□ -0.63
GREB1-208	ENST00000470980	CYP46A1	Q9Y6A2	500 aa		11.09	□□□□□ -0.63
GREB1-208	ENST00000470980	MYH7	P12883	1935 aa		11.08	□□□□□ -0.64
GREB1-208	ENST00000470980	TMEM88B	A6NKF7	163 aa		11.08	□□□□□ -0.64
GREB1-208	ENST00000470980	MBD4	O95243	580 aa		11.08	□□□□□ -0.64
GREB1-208	ENST00000470980	APP	P05067	770 aa		11.08	□□□□□ -0.64
GREB1-208	ENST00000470980	ADCK5	Q3MIX3	580 aa		11.08	□□□□□ -0.64
GREB1-208	ENST00000470980	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.08	□□□□□ -0.64
GREB1-208	ENST00000470980	DPP8	Q6V1X1	898 aa	Predicted RBP	11.08	□□□□□ -0.64
GREB1-208	ENST00000470980	NOL8	Q76FK4	1167 aa	Known RBP	11.08	□□□□□ -0.64
GREB1-208	ENST00000470980	MPND	Q8N594	471 aa		11.08	□□□□□ -0.64
GREB1-208	ENST00000470980	JDP2	Q8WYK2	163 aa		11.08	□□□□□ -0.64
GREB1-208	ENST00000470980	POLL	Q9UGP5	575 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms