RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 SP3Q02447 781 aa17.47■□□□□ 0.39
SEMA3F-208ENST00000470737 ARHGEF6Q15052 776 aa17.47■□□□□ 0.39
SEMA3F-208ENST00000470737 CAVIN4Q5BKX8 364 aa17.47■□□□□ 0.39
SEMA3F-208ENST00000470737 PUS3Q9BZE2 481 aaKnown RBP17.47■□□□□ 0.39
SEMA3F-208ENST00000470737 SPINK5Q9NQ38 1064 aaPredicted RBP17.47■□□□□ 0.39
SEMA3F-208ENST00000470737 CSADQ9Y600 493 aa17.47■□□□□ 0.39
SEMA3F-208ENST00000470737 TESPA1A2RU30 521 aaPredicted RBP17.46■□□□□ 0.39
SEMA3F-208ENST00000470737 CHAF1AQ13111 956 aaPredicted RBP17.46■□□□□ 0.39
SEMA3F-208ENST00000470737 METTL24Q5JXM2 366 aa17.46■□□□□ 0.39
SEMA3F-208ENST00000470737 TBC1D22AQ8WUA7 517 aa17.46■□□□□ 0.39
SEMA3F-208ENST00000470737 GCC1Q96CN9 775 aa17.46■□□□□ 0.39
SEMA3F-208ENST00000470737 PTPN22Q9Y2R2 807 aa17.46■□□□□ 0.39
SEMA3F-208ENST00000470737 WDHD1O75717 1129 aaPredicted RBP17.45■□□□□ 0.38
SEMA3F-208ENST00000470737 GTF2A2P52657 109 aa17.45■□□□□ 0.38
SEMA3F-208ENST00000470737 FAM9BQ8IZU0 186 aa17.45■□□□□ 0.38
SEMA3F-208ENST00000470737 TMOD2Q9NZR1 351 aa17.45■□□□□ 0.38
SEMA3F-208ENST00000470737 IQSEC3Q9UPP2 1182 aaPredicted RBP17.45■□□□□ 0.38
SEMA3F-208ENST00000470737 RIPOR2Q9Y4F9 1068 aa17.45■□□□□ 0.38
SEMA3F-208ENST00000470737 NBPF7P0C2Y1 421 aaPredicted RBP17.44■□□□□ 0.38
SEMA3F-208ENST00000470737 MAP3K9P80192 1104 aa17.44■□□□□ 0.38
SEMA3F-208ENST00000470737 HDLBPQ00341 1268 aaKnown RBP17.44■□□□□ 0.38
SEMA3F-208ENST00000470737 TAF1CQ15572 869 aaPredicted RBP17.44■□□□□ 0.38
SEMA3F-208ENST00000470737 TEKT1Q969V4 418 aa17.44■□□□□ 0.38
SEMA3F-208ENST00000470737 PTPN18Q99952 460 aa17.44■□□□□ 0.38
SEMA3F-208ENST00000470737 TMEM39BQ9GZU3 492 aa17.44■□□□□ 0.38
SEMA3F-208ENST00000470737 BICC1Q9H694 974 aaKnown RBP17.44■□□□□ 0.38
SEMA3F-208ENST00000470737 ZFYVE28Q9HCC9 887 aa17.44■□□□□ 0.38
SEMA3F-208ENST00000470737 KIAA0100Q14667 2235 aaKnown RBP17.44■□□□□ 0.38
SEMA3F-208ENST00000470737 RBBP6Q7Z6E9 1792 aaKnown RBP17.43■□□□□ 0.38
SEMA3F-208ENST00000470737 CCL15-CCL14A0A0B4J2E2 113 aa17.43■□□□□ 0.38
SEMA3F-208ENST00000470737 VGLL4Q14135 290 aa17.43■□□□□ 0.38
SEMA3F-208ENST00000470737 CCL15Q16663 113 aa17.43■□□□□ 0.38
SEMA3F-208ENST00000470737 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.43■□□□□ 0.38
SEMA3F-208ENST00000470737 FBXO33Q7Z6M2 555 aa17.43■□□□□ 0.38
SEMA3F-208ENST00000470737 HOOK2Q96ED9 719 aa17.43■□□□□ 0.38
SEMA3F-208ENST00000470737 TEPSINQ96N21 525 aa17.43■□□□□ 0.38
SEMA3F-208ENST00000470737 TMEM106CQ9BVX2 250 aa17.43■□□□□ 0.38
SEMA3F-208ENST00000470737 MAST3O60307 1309 aa17.43■□□□□ 0.38
SEMA3F-208ENST00000470737 POTEFA5A3E0 1075 aa17.42■□□□□ 0.38
SEMA3F-208ENST00000470737 OTUD5Q96G74 571 aa17.42■□□□□ 0.38
SEMA3F-208ENST00000470737 KAZALD1Q96I82 304 aa17.42■□□□□ 0.38
SEMA3F-208ENST00000470737 MS4A4AQ96JQ5 239 aa17.42■□□□□ 0.38
SEMA3F-208ENST00000470737 UTYO14607 1347 aa17.42■□□□□ 0.38
SEMA3F-208ENST00000470737 RABL6Q3YEC7 729 aaPredicted RBP17.41■□□□□ 0.38
SEMA3F-208ENST00000470737 LRRC24Q50LG9 513 aa17.41■□□□□ 0.38
SEMA3F-208ENST00000470737 CDAN1Q8IWY9 1227 aa17.41■□□□□ 0.38
SEMA3F-208ENST00000470737 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.41■□□□□ 0.38
SEMA3F-208ENST00000470737 BRI3BPQ8WY22 251 aa17.41■□□□□ 0.38
SEMA3F-208ENST00000470737 ARMC5Q96C12 935 aa17.41■□□□□ 0.38
SEMA3F-208ENST00000470737 MYH13Q9UKX3 1938 aa17.41■□□□□ 0.38
SEMA3F-208ENST00000470737 PDE8BO95263 885 aa17.4■□□□□ 0.38
SEMA3F-208ENST00000470737 IFIT1P09914 478 aaKnown RBP17.4■□□□□ 0.38
SEMA3F-208ENST00000470737 NBPF11Q86T75 865 aa17.4■□□□□ 0.38
SEMA3F-208ENST00000470737 CNKSR2Q8WXI2 1034 aa17.4■□□□□ 0.38
SEMA3F-208ENST00000470737 SPDYE5A6NIY4 337 aa17.39■□□□□ 0.37
SEMA3F-208ENST00000470737 CETPP11597 493 aa17.39■□□□□ 0.37
SEMA3F-208ENST00000470737 CACNB3P54284 484 aa17.39■□□□□ 0.37
SEMA3F-208ENST00000470737 KIF22Q14807 665 aa17.39■□□□□ 0.37
SEMA3F-208ENST00000470737 GRIK5Q16478 980 aa17.39■□□□□ 0.37
SEMA3F-208ENST00000470737 SLC9C1Q4G0N8 1177 aa17.39■□□□□ 0.37
SEMA3F-208ENST00000470737 DCAF15Q66K64 600 aa17.39■□□□□ 0.37
SEMA3F-208ENST00000470737 WRNIP1Q96S55 665 aa17.39■□□□□ 0.37
SEMA3F-208ENST00000470737 SUGT1Q9Y2Z0 365 aa17.39■□□□□ 0.37
SEMA3F-208ENST00000470737 PTPRCP08575 1304 aa17.39■□□□□ 0.37
SEMA3F-208ENST00000470737 AK9Q5TCS8 1911 aa17.39■□□□□ 0.37
SEMA3F-208ENST00000470737 HTTP42858 3142 aa17.38■□□□□ 0.37
SEMA3F-208ENST00000470737 BCAMP50895 628 aa17.38■□□□□ 0.37
SEMA3F-208ENST00000470737 PUM3Q15397 648 aaKnown RBP17.38■□□□□ 0.37
SEMA3F-208ENST00000470737 FAM83AQ86UY5 434 aa17.38■□□□□ 0.37
SEMA3F-208ENST00000470737 ERO1BQ86YB8 467 aa17.38■□□□□ 0.37
SEMA3F-208ENST00000470737 FAM43AQ8N2R8 423 aa17.38■□□□□ 0.37
SEMA3F-208ENST00000470737 ANKRD44Q8N8A2 993 aa17.38■□□□□ 0.37
SEMA3F-208ENST00000470737 ZDHHC15Q96MV8 337 aa17.38■□□□□ 0.37
SEMA3F-208ENST00000470737 MRIQ9BWK5 157 aa17.38■□□□□ 0.37
SEMA3F-208ENST00000470737 SNAPC2Q13487 334 aa17.37■□□□□ 0.37
SEMA3F-208ENST00000470737 FKBP1CQ5VVH2 108 aa17.37■□□□□ 0.37
SEMA3F-208ENST00000470737 MRPL50Q8N5N7 158 aaKnown RBP17.37■□□□□ 0.37
SEMA3F-208ENST00000470737 VGLL2Q8N8G2 317 aa17.37■□□□□ 0.37
SEMA3F-208ENST00000470737 KIF16BQ96L93 1317 aa17.37■□□□□ 0.37
SEMA3F-208ENST00000470737 SLC5A1P13866 664 aa17.36■□□□□ 0.37
SEMA3F-208ENST00000470737 EN2P19622 333 aaPredicted RBP17.36■□□□□ 0.37
SEMA3F-208ENST00000470737 SLC4A8Q2Y0W8 1093 aa17.36■□□□□ 0.37
SEMA3F-208ENST00000470737 HHIPL2Q6UWX4 724 aa17.36■□□□□ 0.37
SEMA3F-208ENST00000470737 KLHDC4Q8TBB5 520 aa17.36■□□□□ 0.37
SEMA3F-208ENST00000470737 ZNF333Q96JL9 665 aa17.36■□□□□ 0.37
SEMA3F-208ENST00000470737 ZCCHC17Q9NP64 241 aaKnown RBP17.36■□□□□ 0.37
SEMA3F-208ENST00000470737 PTCH2Q9Y6C5 1203 aa17.36■□□□□ 0.37
SEMA3F-208ENST00000470737 SNCAIPQ9Y6H5 919 aa17.36■□□□□ 0.37
SEMA3F-208ENST00000470737 CENPFP49454 3210 aa17.36■□□□□ 0.37
SEMA3F-208ENST00000470737 PPIL2Q13356 520 aa17.35■□□□□ 0.37
SEMA3F-208ENST00000470737 WDR66Q8TBY9 1149 aa17.35■□□□□ 0.37
SEMA3F-208ENST00000470737 ZKSCAN4Q969J2 545 aaPredicted RBP17.35■□□□□ 0.37
SEMA3F-208ENST00000470737 ZNF341Q9BYN7 854 aa17.35■□□□□ 0.37
SEMA3F-208ENST00000470737 RPAP1Q9BWH6 1393 aaPredicted RBP17.35■□□□□ 0.37
SEMA3F-208ENST00000470737 IRF6O14896 467 aa17.34■□□□□ 0.37
SEMA3F-208ENST00000470737 TLR2O60603 784 aa17.34■□□□□ 0.37
SEMA3F-208ENST00000470737 CAP1Q01518 475 aa17.34■□□□□ 0.37
SEMA3F-208ENST00000470737 APOBEC3HQ6NTF7 200 aaKnown RBP17.34■□□□□ 0.37
SEMA3F-208ENST00000470737 LPIN2Q92539 896 aa17.34■□□□□ 0.37
SEMA3F-208ENST00000470737 BTBD19C9JJ37 291 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms