RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 PSME4Q14997 1843 aa18.12■□□□□ 0.49
COL4A5-203ENST00000470339 MYH2Q9UKX2 1941 aa18.12■□□□□ 0.49
COL4A5-203ENST00000470339 GPAA1O43292 621 aa18.12■□□□□ 0.49
COL4A5-203ENST00000470339 LDHBP07195 334 aaKnown RBP18.12■□□□□ 0.49
COL4A5-203ENST00000470339 HSPD1P10809 573 aaKnown RBP18.12■□□□□ 0.49
COL4A5-203ENST00000470339 CYP7A1P22680 504 aa18.12■□□□□ 0.49
COL4A5-203ENST00000470339 FKBP1AP62942 108 aaKnown RBP18.12■□□□□ 0.49
COL4A5-203ENST00000470339 GSTO1P78417 241 aa18.12■□□□□ 0.49
COL4A5-203ENST00000470339 MECOMQ03112 1051 aa18.12■□□□□ 0.49
COL4A5-203ENST00000470339 RABEP1Q15276 862 aa18.12■□□□□ 0.49
COL4A5-203ENST00000470339 RNF20Q5VTR2 975 aa18.12■□□□□ 0.49
COL4A5-203ENST00000470339 GNAT2P19087 354 aa18.11■□□□□ 0.49
COL4A5-203ENST00000470339 TSGA10IPQ3SY00 556 aa18.11■□□□□ 0.49
COL4A5-203ENST00000470339 AIDAQ96BJ3 306 aa18.11■□□□□ 0.49
COL4A5-203ENST00000470339 STRBPQ96SI9 672 aaKnown RBP18.11■□□□□ 0.49
COL4A5-203ENST00000470339 CTNNA3Q9UI47 895 aa18.11■□□□□ 0.49
COL4A5-203ENST00000470339 RPAP1Q9BWH6 1393 aaPredicted RBP18.11■□□□□ 0.49
COL4A5-203ENST00000470339 LDHCP07864 332 aa18.1■□□□□ 0.49
COL4A5-203ENST00000470339 ZKSCAN1P17029 563 aaPredicted RBP18.1■□□□□ 0.49
COL4A5-203ENST00000470339 PRDX5P30044 214 aa18.1■□□□□ 0.49
COL4A5-203ENST00000470339 DOK7Q18PE1 504 aa18.1■□□□□ 0.49
COL4A5-203ENST00000470339 TTLL5Q6EMB2 1281 aa18.1■□□□□ 0.49
COL4A5-203ENST00000470339 DZIP1Q86YF9 867 aaKnown RBP18.1■□□□□ 0.49
COL4A5-203ENST00000470339 ZNF384Q8TF68 577 aa18.1■□□□□ 0.49
COL4A5-203ENST00000470339 ZNF646O15015 1829 aaPredicted RBP18.09■□□□□ 0.49
COL4A5-203ENST00000470339 GTF2IP78347 998 aa18.09■□□□□ 0.49
COL4A5-203ENST00000470339 ALX1Q15699 326 aa18.09■□□□□ 0.49
COL4A5-203ENST00000470339 MFSD14BQ5SR56 506 aa18.09■□□□□ 0.49
COL4A5-203ENST00000470339 STRIP1Q5VSL9 837 aa18.09■□□□□ 0.49
COL4A5-203ENST00000470339 CREB3L3Q68CJ9 461 aa18.09■□□□□ 0.49
COL4A5-203ENST00000470339 CERS3Q8IU89 383 aa18.09■□□□□ 0.49
COL4A5-203ENST00000470339 SLF2Q8IX21 1173 aa18.09■□□□□ 0.49
COL4A5-203ENST00000470339 FAM163AQ96GL9 167 aaPredicted RBP18.09■□□□□ 0.49
COL4A5-203ENST00000470339 IPO9Q96P70 1041 aaKnown RBP18.09■□□□□ 0.49
COL4A5-203ENST00000470339 SCN9AQ15858 1988 aa18.09■□□□□ 0.49
COL4A5-203ENST00000470339 ZMYM6O95789 1325 aa18.08■□□□□ 0.49
COL4A5-203ENST00000470339 LTBP3Q9NS15 1303 aa18.08■□□□□ 0.49
COL4A5-203ENST00000470339 MAGEB6P1A0A0J9YX57 407 aa18.08■□□□□ 0.48
COL4A5-203ENST00000470339 PATL2C9JE40 543 aaKnown RBP18.08■□□□□ 0.48
COL4A5-203ENST00000470339 SLC27A2O14975 620 aa18.08■□□□□ 0.48
COL4A5-203ENST00000470339 PPIP5K2O43314 1243 aa18.08■□□□□ 0.48
COL4A5-203ENST00000470339 ECE2O60344 883 aa18.08■□□□□ 0.48
COL4A5-203ENST00000470339 AOC3Q16853 763 aa18.08■□□□□ 0.48
COL4A5-203ENST00000470339 VPS53Q5VIR6 699 aa18.08■□□□□ 0.48
COL4A5-203ENST00000470339 KLHL34Q8N239 644 aa18.08■□□□□ 0.48
COL4A5-203ENST00000470339 SNX21Q969T3 373 aa18.08■□□□□ 0.48
COL4A5-203ENST00000470339 TM6SF1Q9BZW5 370 aa18.08■□□□□ 0.48
COL4A5-203ENST00000470339 PALD1Q9ULE6 856 aa18.08■□□□□ 0.48
COL4A5-203ENST00000470339 SNX14Q9Y5W7 946 aa18.08■□□□□ 0.48
COL4A5-203ENST00000470339 MBD4O95243 580 aa18.07■□□□□ 0.48
COL4A5-203ENST00000470339 BECN1Q14457 450 aa18.07■□□□□ 0.48
COL4A5-203ENST00000470339 KRT32Q14532 448 aa18.07■□□□□ 0.48
COL4A5-203ENST00000470339 DBNDD1Q9H9R9 158 aa18.07■□□□□ 0.48
COL4A5-203ENST00000470339 JAG2Q9Y219 1238 aa18.07■□□□□ 0.48
COL4A5-203ENST00000470339 LAMA4Q16363 1823 aa18.07■□□□□ 0.48
COL4A5-203ENST00000470339 USP17L3A6NCW0 530 aa18.06■□□□□ 0.48
COL4A5-203ENST00000470339 USP17L4A6NCW7 530 aa18.06■□□□□ 0.48
COL4A5-203ENST00000470339 FOXP2O15409 715 aa18.06■□□□□ 0.48
COL4A5-203ENST00000470339 PPP4CP60510 307 aa18.06■□□□□ 0.48
COL4A5-203ENST00000470339 USP17L1Q7RTZ2 530 aa18.06■□□□□ 0.48
COL4A5-203ENST00000470339 ADGRA1Q86SQ6 560 aa18.06■□□□□ 0.48
COL4A5-203ENST00000470339 RASEFQ8IZ41 740 aa18.06■□□□□ 0.48
COL4A5-203ENST00000470339 RIOK1Q9BRS2 568 aaKnown RBP18.06■□□□□ 0.48
COL4A5-203ENST00000470339 MRIQ9BWK5 157 aa18.06■□□□□ 0.48
COL4A5-203ENST00000470339 BAG3O95817 575 aa18.05■□□□□ 0.48
COL4A5-203ENST00000470339 FGAP02671 866 aa18.05■□□□□ 0.48
COL4A5-203ENST00000470339 GIMAP6Q6P9H5 292 aa18.05■□□□□ 0.48
COL4A5-203ENST00000470339 LCORLQ8N3X6 602 aa18.05■□□□□ 0.48
COL4A5-203ENST00000470339 LARGE2Q8N3Y3 721 aa18.05■□□□□ 0.48
COL4A5-203ENST00000470339 NLGN2Q8NFZ4 835 aa18.05■□□□□ 0.48
COL4A5-203ENST00000470339 NACAP1Q9BZK3 213 aa18.05■□□□□ 0.48
COL4A5-203ENST00000470339 TAOK3Q9H2K8 898 aa18.05■□□□□ 0.48
COL4A5-203ENST00000470339 ARMT1Q9H993 441 aa18.05■□□□□ 0.48
COL4A5-203ENST00000470339 BCS1LQ9Y276 419 aa18.05■□□□□ 0.48
COL4A5-203ENST00000470339 MROH7-TTC4A0A0A0MT08 1334 aa18.04■□□□□ 0.48
COL4A5-203ENST00000470339 PSMA5P28066 241 aa18.04■□□□□ 0.48
COL4A5-203ENST00000470339 IARSP41252 1262 aaKnown RBP18.04■□□□□ 0.48
COL4A5-203ENST00000470339 GRIK5Q16478 980 aa18.04■□□□□ 0.48
COL4A5-203ENST00000470339 DACT2Q5SW24 774 aa18.04■□□□□ 0.48
COL4A5-203ENST00000470339 MIGA1Q8NAN2 632 aa18.04■□□□□ 0.48
COL4A5-203ENST00000470339 NOL10Q9BSC4 688 aaKnown RBP18.04■□□□□ 0.48
COL4A5-203ENST00000470339 ZNF277Q9NRM2 450 aaPredicted RBP18.04■□□□□ 0.48
COL4A5-203ENST00000470339 GAKO14976 1311 aa18.03■□□□□ 0.48
COL4A5-203ENST00000470339 GPR75-ASB3A0A0A6YYF3 556 aa18.03■□□□□ 0.48
COL4A5-203ENST00000470339 GSG1L2A8MUP6 293 aa18.03■□□□□ 0.48
COL4A5-203ENST00000470339 ST18O60284 1047 aa18.03■□□□□ 0.48
COL4A5-203ENST00000470339 APPP05067 770 aa18.03■□□□□ 0.48
COL4A5-203ENST00000470339 CYP21A2P08686 494 aa18.03■□□□□ 0.48
COL4A5-203ENST00000470339 HDLBPQ00341 1268 aaKnown RBP18.03■□□□□ 0.48
COL4A5-203ENST00000470339 IMMTQ16891 758 aaKnown RBP18.03■□□□□ 0.48
COL4A5-203ENST00000470339 IFNL3Q8IZI9 196 aa18.03■□□□□ 0.48
COL4A5-203ENST00000470339 CERS5Q8N5B7 392 aa18.03■□□□□ 0.48
COL4A5-203ENST00000470339 CRNKL1Q9BZJ0 848 aaKnown RBP18.03■□□□□ 0.48
COL4A5-203ENST00000470339 FHDC1Q9C0D6 1143 aaPredicted RBP18.03■□□□□ 0.48
COL4A5-203ENST00000470339 ZNRF3Q9ULT6 936 aa18.03■□□□□ 0.48
COL4A5-203ENST00000470339 SLC4A4Q9Y6R1 1079 aa18.03■□□□□ 0.48
COL4A5-203ENST00000470339 PLCG2P16885 1265 aa18.02■□□□□ 0.48
COL4A5-203ENST00000470339 MCM2P49736 904 aa18.02■□□□□ 0.48
COL4A5-203ENST00000470339 NIM1KQ8IY84 436 aa18.02■□□□□ 0.48
COL4A5-203ENST00000470339 FBXW7Q969H0 707 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms