RNA–Protein interactions for RNA: ENST00000470160.1

KDM3A-210, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 2,955 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-210ENST00000470160 FGRP09769 529 aa8.36□□□□□ -1.07
KDM3A-210ENST00000470160 ATP2B4P23634 1241 aa8.36□□□□□ -1.07
KDM3A-210ENST00000470160 PI16Q6UXB8 463 aa8.36□□□□□ -1.07
KDM3A-210ENST00000470160 COL23A1Q86Y22 540 aaPredicted RBP8.36□□□□□ -1.07
KDM3A-210ENST00000470160 MB21D2Q8IYB1 491 aaPredicted RBP8.36□□□□□ -1.07
KDM3A-210ENST00000470160 TDRD7Q8NHU6 1098 aaKnown RBP8.36□□□□□ -1.07
KDM3A-210ENST00000470160 ZNF274Q96GC6 653 aaPredicted RBP8.36□□□□□ -1.07
KDM3A-210ENST00000470160 TAF6LQ9Y6J9 622 aa8.36□□□□□ -1.07
KDM3A-210ENST00000470160 SNED1Q8TER0 1413 aa8.36□□□□□ -1.07
KDM3A-210ENST00000470160 FAM177BA6PVY3 158 aa8.35□□□□□ -1.07
KDM3A-210ENST00000470160 PCP11498 1178 aaKnown RBP8.35□□□□□ -1.07
KDM3A-210ENST00000470160 IL1R1P14778 569 aa8.35□□□□□ -1.07
KDM3A-210ENST00000470160 BICDL1Q6ZP65 573 aa8.35□□□□□ -1.07
KDM3A-210ENST00000470160 SMIM5Q71RC9 77 aa8.35□□□□□ -1.07
KDM3A-210ENST00000470160 SP8Q8IXZ3 490 aa8.35□□□□□ -1.07
KDM3A-210ENST00000470160 ZGPATQ8N5A5 531 aaKnown RBP8.35□□□□□ -1.07
KDM3A-210ENST00000470160 WWC3Q9ULE0 1092 aa8.35□□□□□ -1.07
KDM3A-210ENST00000470160 PFKFB2O60825 505 aa8.35□□□□□ -1.07
KDM3A-210ENST00000470160 KCNJ4P48050 445 aa8.35□□□□□ -1.07
KDM3A-210ENST00000470160 ME3Q16798 604 aa8.35□□□□□ -1.07
KDM3A-210ENST00000470160 IMMTQ16891 758 aaKnown RBP8.35□□□□□ -1.07
KDM3A-210ENST00000470160 SKOR2Q2VWA4 1001 aaPredicted RBP8.35□□□□□ -1.07
KDM3A-210ENST00000470160 CERS3Q8IU89 383 aa8.35□□□□□ -1.07
KDM3A-210ENST00000470160 SMARCC2Q8TAQ2 1214 aa8.35□□□□□ -1.07
KDM3A-210ENST00000470160 BRPF3Q9ULD4 1205 aa8.35□□□□□ -1.07
KDM3A-210ENST00000470160 TPCN1Q9ULQ1 816 aa8.35□□□□□ -1.07
KDM3A-210ENST00000470160 APBA3O96018 575 aa8.34□□□□□ -1.07
KDM3A-210ENST00000470160 HIBADHP31937 336 aaKnown RBP8.34□□□□□ -1.07
KDM3A-210ENST00000470160 POTEAQ6S8J7 498 aa8.34□□□□□ -1.07
KDM3A-210ENST00000470160 TMEM87AQ8NBN3 555 aa8.34□□□□□ -1.07
KDM3A-210ENST00000470160 RIOK1Q9BRS2 568 aaKnown RBP8.34□□□□□ -1.07
KDM3A-210ENST00000470160 HSP90AA1P07900 732 aaKnown RBP8.34□□□□□ -1.07
KDM3A-210ENST00000470160 RCAN1P53805 252 aa8.34□□□□□ -1.07
KDM3A-210ENST00000470160 GTF3C6Q969F1 213 aa8.34□□□□□ -1.07
KDM3A-210ENST00000470160 NBPF3Q9H094 633 aa8.34□□□□□ -1.07
KDM3A-210ENST00000470160 PRDM10Q9NQV6 1147 aa8.34□□□□□ -1.07
KDM3A-210ENST00000470160 FAM205AQ6ZU69 1335 aa8.34□□□□□ -1.07
KDM3A-210ENST00000470160 WDR33Q9C0J8 1336 aaKnown RBP8.34□□□□□ -1.07
KDM3A-210ENST00000470160 GSG1L2A8MUP6 293 aa8.34□□□□□ -1.08
KDM3A-210ENST00000470160 PHF14O94880 888 aa8.34□□□□□ -1.08
KDM3A-210ENST00000470160 BAG4O95429 457 aaKnown RBP8.34□□□□□ -1.08
KDM3A-210ENST00000470160 BCCIPQ9P287 314 aaKnown RBP eCLIP8.34□□□□□ -1.08
KDM3A-210ENST00000470160 LARGE1O95461 756 aa8.33□□□□□ -1.08
KDM3A-210ENST00000470160 NPR1P16066 1061 aa8.33□□□□□ -1.08
KDM3A-210ENST00000470160 PPP4CP60510 307 aa8.33□□□□□ -1.08
KDM3A-210ENST00000470160 WASHC4Q2M389 1173 aa8.33□□□□□ -1.08
KDM3A-210ENST00000470160 SLFNL1Q499Z3 407 aa8.33□□□□□ -1.08
KDM3A-210ENST00000470160 SPTY2D1Q68D10 685 aaPredicted RBP8.33□□□□□ -1.08
KDM3A-210ENST00000470160 ZNF384Q8TF68 577 aa8.33□□□□□ -1.08
KDM3A-210ENST00000470160 NSUN4Q96CB9 384 aaKnown RBP8.33□□□□□ -1.08
KDM3A-210ENST00000470160 FAM163AQ96GL9 167 aaPredicted RBP8.33□□□□□ -1.08
KDM3A-210ENST00000470160 SUGT1Q9Y2Z0 365 aa8.33□□□□□ -1.08
KDM3A-210ENST00000470160 NAV1Q8NEY1 1877 aa8.33□□□□□ -1.08
KDM3A-210ENST00000470160 SNAP23O00161 211 aa8.33□□□□□ -1.08
KDM3A-210ENST00000470160 SRGNP10124 158 aa8.33□□□□□ -1.08
KDM3A-210ENST00000470160 PDE6BP35913 854 aa8.33□□□□□ -1.08
KDM3A-210ENST00000470160 GYG1P46976 350 aa8.33□□□□□ -1.08
KDM3A-210ENST00000470160 COL9A3Q14050 684 aaPredicted RBP8.33□□□□□ -1.08
KDM3A-210ENST00000470160 IFNL3Q8IZI9 196 aa8.33□□□□□ -1.08
KDM3A-210ENST00000470160 MAGEB6Q8N7X4 407 aa8.33□□□□□ -1.08
KDM3A-210ENST00000470160 NCOA7Q8NI08 942 aa8.33□□□□□ -1.08
KDM3A-210ENST00000470160 WDR66Q8TBY9 1149 aa8.33□□□□□ -1.08
KDM3A-210ENST00000470160 STAG1Q8WVM7 1258 aa8.33□□□□□ -1.08
KDM3A-210ENST00000470160 RPGRQ92834 1020 aaKnown RBP8.33□□□□□ -1.08
KDM3A-210ENST00000470160 EPB41L4AQ9HCS5 686 aaPredicted RBP8.33□□□□□ -1.08
KDM3A-210ENST00000470160 ATP6V0A2Q9Y487 856 aa8.33□□□□□ -1.08
KDM3A-210ENST00000470160 ECM29Q5VYK3 1845 aa8.32□□□□□ -1.08
KDM3A-210ENST00000470160 ZNF213O14771 459 aa8.32□□□□□ -1.08
KDM3A-210ENST00000470160 SBK1Q52WX2 424 aa8.32□□□□□ -1.08
KDM3A-210ENST00000470160 STYK1Q6J9G0 422 aa8.32□□□□□ -1.08
KDM3A-210ENST00000470160 SGMS1Q86VZ5 419 aa8.32□□□□□ -1.08
KDM3A-210ENST00000470160 MYH2Q9UKX2 1941 aa8.32□□□□□ -1.08
KDM3A-210ENST00000470160 IDH1O75874 414 aaKnown RBP8.32□□□□□ -1.08
KDM3A-210ENST00000470160 PDCP20941 246 aa8.32□□□□□ -1.08
KDM3A-210ENST00000470160 ALDH1B1P30837 517 aa8.32□□□□□ -1.08
KDM3A-210ENST00000470160 MCM5P33992 734 aa8.32□□□□□ -1.08
KDM3A-210ENST00000470160 SLC15A2Q16348 729 aa8.32□□□□□ -1.08
KDM3A-210ENST00000470160 Q6ZUG5 572 aa8.32□□□□□ -1.08
KDM3A-210ENST00000470160 AIDAQ96BJ3 306 aa8.32□□□□□ -1.08
KDM3A-210ENST00000470160 ZFP91Q96JP5 570 aaPredicted RBP8.32□□□□□ -1.08
KDM3A-210ENST00000470160 TMEM87BQ96K49 555 aa8.32□□□□□ -1.08
KDM3A-210ENST00000470160 CNNM2Q9H8M5 875 aa8.32□□□□□ -1.08
KDM3A-210ENST00000470160 ROBO3Q96MS0 1386 aa8.32□□□□□ -1.08
KDM3A-210ENST00000470160 CPA1P15085 419 aa8.31□□□□□ -1.08
KDM3A-210ENST00000470160 LIFRP42702 1097 aa8.31□□□□□ -1.08
KDM3A-210ENST00000470160 ANTXR2P58335 489 aa8.31□□□□□ -1.08
KDM3A-210ENST00000470160 FKBP1AP62942 108 aaKnown RBP8.31□□□□□ -1.08
KDM3A-210ENST00000470160 GRIPAP1Q4V328 841 aa8.31□□□□□ -1.08
KDM3A-210ENST00000470160 ZNF804AQ7Z570 1209 aa8.31□□□□□ -1.08
KDM3A-210ENST00000470160 SPRYD3Q8NCJ5 442 aa8.31□□□□□ -1.08
KDM3A-210ENST00000470160 TFCP2L1Q9NZI6 479 aa8.31□□□□□ -1.08
KDM3A-210ENST00000470160 ISY1Q9ULR0 285 aaKnown RBP8.31□□□□□ -1.08
KDM3A-210ENST00000470160 C10orf71Q711Q0 1435 aa8.31□□□□□ -1.08
KDM3A-210ENST00000470160 GPSM2P81274 684 aa8.31□□□□□ -1.08
KDM3A-210ENST00000470160 RTFDC1Q9BY42 306 aaPredicted RBP8.31□□□□□ -1.08
KDM3A-210ENST00000470160 MKRN1Q9UHC7 482 aaKnown RBP8.31□□□□□ -1.08
KDM3A-210ENST00000470160 BRCA1P38398 1863 aaKnown RBP8.31□□□□□ -1.08
KDM3A-210ENST00000470160 MBD4O95243 580 aa8.31□□□□□ -1.08
KDM3A-210ENST00000470160 ZSCAN22P10073 491 aaPredicted RBP8.31□□□□□ -1.08
KDM3A-210ENST00000470160 SYT1P21579 422 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms