RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 CHAF1AQ13111 956 aaPredicted RBP17.48■□□□□ 0.39
COMMD3-208ENST00000470045 IFFO2Q5TF58 517 aa17.48■□□□□ 0.39
COMMD3-208ENST00000470045 DZIP1LQ8IYY4 767 aaKnown RBP17.48■□□□□ 0.39
COMMD3-208ENST00000470045 DEFB129Q9H1M3 183 aa17.48■□□□□ 0.39
COMMD3-208ENST00000470045 SUGT1Q9Y2Z0 365 aa17.48■□□□□ 0.39
COMMD3-208ENST00000470045 PNMA6EA0A0J9YXQ4 647 aa17.47■□□□□ 0.39
COMMD3-208ENST00000470045 FRAT2O75474 233 aaPredicted RBP17.47■□□□□ 0.39
COMMD3-208ENST00000470045 NF2P35240 595 aa17.47■□□□□ 0.39
COMMD3-208ENST00000470045 CRKP46108 304 aa17.47■□□□□ 0.39
COMMD3-208ENST00000470045 ZNF157P51786 506 aaPredicted RBP17.47■□□□□ 0.39
COMMD3-208ENST00000470045 SPDYE2Q495Y8 402 aa17.47■□□□□ 0.39
COMMD3-208ENST00000470045 ZIC5Q96T25 663 aa17.47■□□□□ 0.39
COMMD3-208ENST00000470045 CLRN2A0PK11 232 aa17.46■□□□□ 0.39
COMMD3-208ENST00000470045 RBM5P52756 815 aaKnown RBP eCLIP17.46■□□□□ 0.39
COMMD3-208ENST00000470045 MOB2Q70IA6 237 aa17.46■□□□□ 0.39
COMMD3-208ENST00000470045 RASAL3Q86YV0 1011 aa17.46■□□□□ 0.39
COMMD3-208ENST00000470045 FTSJ3Q8IY81 847 aaKnown RBP17.46■□□□□ 0.39
COMMD3-208ENST00000470045 SP7Q8TDD2 431 aaPredicted RBP17.46■□□□□ 0.39
COMMD3-208ENST00000470045 MRIQ9BWK5 157 aa17.46■□□□□ 0.39
COMMD3-208ENST00000470045 AKAP11Q9UKA4 1901 aa17.46■□□□□ 0.39
COMMD3-208ENST00000470045 OTOFQ9HC10 1997 aa17.46■□□□□ 0.39
COMMD3-208ENST00000470045 SEMA3EO15041 775 aa17.45■□□□□ 0.38
COMMD3-208ENST00000470045 CA12O43570 354 aa17.45■□□□□ 0.38
COMMD3-208ENST00000470045 PHKA1P46020 1223 aa17.45■□□□□ 0.38
COMMD3-208ENST00000470045 LBX1P52954 281 aa17.45■□□□□ 0.38
COMMD3-208ENST00000470045 POLA2Q14181 598 aa17.45■□□□□ 0.38
COMMD3-208ENST00000470045 WDR66Q8TBY9 1149 aa17.45■□□□□ 0.38
COMMD3-208ENST00000470045 ZNF70Q9UC06 446 aaPredicted RBP17.45■□□□□ 0.38
COMMD3-208ENST00000470045 MAST3O60307 1309 aa17.45■□□□□ 0.38
COMMD3-208ENST00000470045 SALL1Q9NSC2 1324 aa17.45■□□□□ 0.38
COMMD3-208ENST00000470045 UBE2Q2LH0YL09 131 aa17.44■□□□□ 0.38
COMMD3-208ENST00000470045 ZBTB7BO15156 539 aaPredicted RBP17.44■□□□□ 0.38
COMMD3-208ENST00000470045 ADORA1P30542 326 aa17.44■□□□□ 0.38
COMMD3-208ENST00000470045 TFCP2Q12800 502 aa17.44■□□□□ 0.38
COMMD3-208ENST00000470045 ITPRIPQ8IWB1 547 aa17.44■□□□□ 0.38
COMMD3-208ENST00000470045 BEGAINQ9BUH8 593 aa17.44■□□□□ 0.38
COMMD3-208ENST00000470045 TDRD3Q9H7E2 651 aaKnown RBP17.44■□□□□ 0.38
COMMD3-208ENST00000470045 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.44■□□□□ 0.38
COMMD3-208ENST00000470045 A0A1B0GUL7 405 aa17.43■□□□□ 0.38
COMMD3-208ENST00000470045 KIF23Q02241 960 aaPredicted RBP17.43■□□□□ 0.38
COMMD3-208ENST00000470045 TNFAIP1Q13829 316 aa17.43■□□□□ 0.38
COMMD3-208ENST00000470045 MAP3K11Q16584 847 aa17.43■□□□□ 0.38
COMMD3-208ENST00000470045 LDLRAD1Q5T700 205 aa17.43■□□□□ 0.38
COMMD3-208ENST00000470045 CCDC102BQ68D86 513 aa17.43■□□□□ 0.38
COMMD3-208ENST00000470045 SSH3Q8TE77 659 aa17.43■□□□□ 0.38
COMMD3-208ENST00000470045 TEKT1Q969V4 418 aa17.43■□□□□ 0.38
COMMD3-208ENST00000470045 ZDHHC15Q96MV8 337 aa17.43■□□□□ 0.38
COMMD3-208ENST00000470045 VEZTQ9HBM0 779 aa17.43■□□□□ 0.38
COMMD3-208ENST00000470045 GNL3LQ9NVN8 582 aaKnown RBP17.43■□□□□ 0.38
COMMD3-208ENST00000470045 AKAP2Q9Y2D5 859 aa17.43■□□□□ 0.38
COMMD3-208ENST00000470045 PDS5AQ29RF7 1337 aaKnown RBP17.43■□□□□ 0.38
COMMD3-208ENST00000470045 RASA3Q14644 834 aa17.42■□□□□ 0.38
COMMD3-208ENST00000470045 HHIPL2Q6UWX4 724 aa17.42■□□□□ 0.38
COMMD3-208ENST00000470045 ARMC9Q7Z3E5 817 aa17.42■□□□□ 0.38
COMMD3-208ENST00000470045 TNS4Q8IZW8 715 aa17.42■□□□□ 0.38
COMMD3-208ENST00000470045 DENND2AQ9ULE3 1009 aa17.42■□□□□ 0.38
COMMD3-208ENST00000470045 MYH2Q9UKX2 1941 aa17.41■□□□□ 0.38
COMMD3-208ENST00000470045 TIMM10P62072 90 aa17.41■□□□□ 0.38
COMMD3-208ENST00000470045 ATP8B2P98198 1209 aa17.41■□□□□ 0.38
COMMD3-208ENST00000470045 TTLL12Q14166 644 aaPredicted RBP17.41■□□□□ 0.38
COMMD3-208ENST00000470045 APOBEC3HQ6NTF7 200 aaKnown RBP17.41■□□□□ 0.38
COMMD3-208ENST00000470045 TEPSINQ96N21 525 aa17.41■□□□□ 0.38
COMMD3-208ENST00000470045 PRDX5P30044 214 aa17.4■□□□□ 0.38
COMMD3-208ENST00000470045 RASGRF1Q13972 1273 aa17.4■□□□□ 0.38
COMMD3-208ENST00000470045 MVPQ14764 893 aaKnown RBP17.4■□□□□ 0.38
COMMD3-208ENST00000470045 SUPT20HL1Q3ZLR7 823 aa17.4■□□□□ 0.38
COMMD3-208ENST00000470045 NBPF12Q5TAG4 269 aaPredicted RBP17.4■□□□□ 0.38
COMMD3-208ENST00000470045 REM2Q8IYK8 340 aaPredicted RBP17.4■□□□□ 0.38
COMMD3-208ENST00000470045 PANK1Q8TE04 598 aa17.4■□□□□ 0.38
COMMD3-208ENST00000470045 XAGE2Q96GT9 111 aa17.4■□□□□ 0.38
COMMD3-208ENST00000470045 C1orf115Q9H7X2 142 aa17.4■□□□□ 0.38
COMMD3-208ENST00000470045 ANGEL1Q9UNK9 670 aaKnown RBP17.4■□□□□ 0.38
COMMD3-208ENST00000470045 UNCXA6NJT0 531 aa17.39■□□□□ 0.37
COMMD3-208ENST00000470045 G3BP1Q13283 466 aaKnown RBP eCLIP17.39■□□□□ 0.37
COMMD3-208ENST00000470045 PRKG1Q13976 671 aa17.39■□□□□ 0.37
COMMD3-208ENST00000470045 FKBP1CQ5VVH2 108 aa17.39■□□□□ 0.37
COMMD3-208ENST00000470045 CSRNP1Q96S65 589 aa17.39■□□□□ 0.37
COMMD3-208ENST00000470045 SAGE1Q9NXZ1 904 aa17.39■□□□□ 0.37
COMMD3-208ENST00000470045 FZD1Q9UP38 647 aa17.39■□□□□ 0.37
COMMD3-208ENST00000470045 RPAP1Q9BWH6 1393 aaPredicted RBP17.39■□□□□ 0.37
COMMD3-208ENST00000470045 PPP1R12BO60237 982 aaPredicted RBP17.38■□□□□ 0.37
COMMD3-208ENST00000470045 MS4A1P11836 297 aa17.38■□□□□ 0.37
COMMD3-208ENST00000470045 GPR108Q9NPR9 543 aa17.38■□□□□ 0.37
COMMD3-208ENST00000470045 TSKSQ9UJT2 592 aa17.38■□□□□ 0.37
COMMD3-208ENST00000470045 RCAN3Q9UKA8 241 aa17.38■□□□□ 0.37
COMMD3-208ENST00000470045 NOP58Q9Y2X3 529 aaKnown RBP17.38■□□□□ 0.37
COMMD3-208ENST00000470045 DAGLAQ9Y4D2 1042 aa17.38■□□□□ 0.37
COMMD3-208ENST00000470045 CASP8AP2Q9UKL3 1982 aa17.37■□□□□ 0.37
COMMD3-208ENST00000470045 TCP10L2B9ZVM9 353 aa17.37■□□□□ 0.37
COMMD3-208ENST00000470045 LDHBP07195 334 aaKnown RBP17.37■□□□□ 0.37
COMMD3-208ENST00000470045 TNNI2P48788 182 aa17.37■□□□□ 0.37
COMMD3-208ENST00000470045 CEP85Q6P2H3 762 aa17.37■□□□□ 0.37
COMMD3-208ENST00000470045 FAM83AQ86UY5 434 aa17.37■□□□□ 0.37
COMMD3-208ENST00000470045 CDAN1Q8IWY9 1227 aa17.37■□□□□ 0.37
COMMD3-208ENST00000470045 ZGPATQ8N5A5 531 aaKnown RBP17.37■□□□□ 0.37
COMMD3-208ENST00000470045 TMEM39BQ9GZU3 492 aa17.37■□□□□ 0.37
COMMD3-208ENST00000470045 MAST2Q6P0Q8 1798 aa17.36■□□□□ 0.37
COMMD3-208ENST00000470045 USP2O75604 605 aaPredicted RBP17.36■□□□□ 0.37
COMMD3-208ENST00000470045 ARID4AP29374 1257 aaPredicted RBP17.36■□□□□ 0.37
COMMD3-208ENST00000470045 CACNB3P54284 484 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms