RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 EGFRP00533 1210 aa18.01■□□□□ 0.47
COL9A3-209ENST00000469852 MICALL2Q8IY33 904 aa18.01■□□□□ 0.47
COL9A3-209ENST00000469852 RBM46Q8TBY0 533 aaKnown RBP18.01■□□□□ 0.47
COL9A3-209ENST00000469852 DPF2Q92785 391 aa18.01■□□□□ 0.47
COL9A3-209ENST00000469852 PAG1Q9NWQ8 432 aa18.01■□□□□ 0.47
COL9A3-209ENST00000469852 CNOT7Q9UIV1 285 aaKnown RBP18.01■□□□□ 0.47
COL9A3-209ENST00000469852 AOX1Q06278 1338 aa18■□□□□ 0.47
COL9A3-209ENST00000469852 ERC2O15083 957 aa18■□□□□ 0.47
COL9A3-209ENST00000469852 USP17L8P0C7I0 530 aa18■□□□□ 0.47
COL9A3-209ENST00000469852 TTF2Q9UNY4 1162 aaKnown RBP18■□□□□ 0.47
COL9A3-209ENST00000469852 CHGBP05060 677 aa17.99■□□□□ 0.47
COL9A3-209ENST00000469852 LDHBP07195 334 aaKnown RBP17.99■□□□□ 0.47
COL9A3-209ENST00000469852 GSPT1P15170 499 aaKnown RBP17.99■□□□□ 0.47
COL9A3-209ENST00000469852 RGS3P49796 1198 aa17.99■□□□□ 0.47
COL9A3-209ENST00000469852 ZNF280AP59817 542 aaPredicted RBP17.99■□□□□ 0.47
COL9A3-209ENST00000469852 DIXDC1Q155Q3 683 aa17.99■□□□□ 0.47
COL9A3-209ENST00000469852 RRAGCQ9HB90 399 aa17.99■□□□□ 0.47
COL9A3-209ENST00000469852 MYH7P12883 1935 aa17.99■□□□□ 0.47
COL9A3-209ENST00000469852 MYH2Q9UKX2 1941 aa17.99■□□□□ 0.47
COL9A3-209ENST00000469852 MECOMQ03112 1051 aa17.98■□□□□ 0.47
COL9A3-209ENST00000469852 SLFNL1Q499Z3 407 aa17.98■□□□□ 0.47
COL9A3-209ENST00000469852 ERICH6Q7L0X2 663 aa17.98■□□□□ 0.47
COL9A3-209ENST00000469852 SAMD7Q7Z3H4 446 aa17.98■□□□□ 0.47
COL9A3-209ENST00000469852 ZGPATQ8N5A5 531 aaKnown RBP17.98■□□□□ 0.47
COL9A3-209ENST00000469852 TRPM4Q8TD43 1214 aa17.98■□□□□ 0.47
COL9A3-209ENST00000469852 NSUN4Q96CB9 384 aaKnown RBP17.98■□□□□ 0.47
COL9A3-209ENST00000469852 RAI14Q9P0K7 980 aa17.98■□□□□ 0.47
COL9A3-209ENST00000469852 LRP2BPQ9P2M1 347 aa17.98■□□□□ 0.47
COL9A3-209ENST00000469852 IDH1O75874 414 aaKnown RBP17.97■□□□□ 0.47
COL9A3-209ENST00000469852 TBC1D10BQ4KMP7 808 aaPredicted RBP17.97■□□□□ 0.47
COL9A3-209ENST00000469852 TTC22Q5TAA0 569 aa17.97■□□□□ 0.47
COL9A3-209ENST00000469852 HACL1Q9UJ83 578 aa17.97■□□□□ 0.47
COL9A3-209ENST00000469852 SUGT1Q9Y2Z0 365 aa17.97■□□□□ 0.47
COL9A3-209ENST00000469852 AK9Q5TCS8 1911 aa17.96■□□□□ 0.47
COL9A3-209ENST00000469852 LMOD1P29536 600 aaPredicted RBP17.96■□□□□ 0.47
COL9A3-209ENST00000469852 HIRAP54198 1017 aaPredicted RBP17.96■□□□□ 0.47
COL9A3-209ENST00000469852 RBM26Q5T8P6 1007 aaKnown RBP17.96■□□□□ 0.47
COL9A3-209ENST00000469852 SPTY2D1Q68D10 685 aaPredicted RBP17.96■□□□□ 0.47
COL9A3-209ENST00000469852 ADGRA1Q86SQ6 560 aa17.96■□□□□ 0.47
COL9A3-209ENST00000469852 DZIP1Q86YF9 867 aaKnown RBP17.96■□□□□ 0.47
COL9A3-209ENST00000469852 TAF1DQ9H5J8 278 aaPredicted RBP17.96■□□□□ 0.47
COL9A3-209ENST00000469852 MYOZ2Q9NPC6 264 aa17.96■□□□□ 0.47
COL9A3-209ENST00000469852 H7C1D1 291 aa17.95■□□□□ 0.46
COL9A3-209ENST00000469852 POTEIP0CG38 1075 aa17.95■□□□□ 0.46
COL9A3-209ENST00000469852 POTEJP0CG39 1038 aa17.95■□□□□ 0.46
COL9A3-209ENST00000469852 EPHX2P34913 555 aa17.95■□□□□ 0.46
COL9A3-209ENST00000469852 CRKP46108 304 aa17.95■□□□□ 0.46
COL9A3-209ENST00000469852 FSTL1Q12841 308 aa17.95■□□□□ 0.46
COL9A3-209ENST00000469852 TTF1Q15361 905 aaPredicted RBP17.95■□□□□ 0.46
COL9A3-209ENST00000469852 CFAP100Q494V2 611 aa17.95■□□□□ 0.46
COL9A3-209ENST00000469852 KBTBD3Q8NAB2 608 aa17.95■□□□□ 0.46
COL9A3-209ENST00000469852 ZBED3Q96IU2 234 aaPredicted RBP17.95■□□□□ 0.46
COL9A3-209ENST00000469852 ASTN2O75129 1339 aaPredicted RBP17.95■□□□□ 0.46
COL9A3-209ENST00000469852 HTRA3P83110 453 aa17.94■□□□□ 0.46
COL9A3-209ENST00000469852 KIF4BQ2VIQ3 1234 aa17.94■□□□□ 0.46
COL9A3-209ENST00000469852 OGFOD1Q8N543 542 aa17.94■□□□□ 0.46
COL9A3-209ENST00000469852 MAGEB6Q8N7X4 407 aa17.94■□□□□ 0.46
COL9A3-209ENST00000469852 ADARB2Q9NS39 739 aaKnown RBP17.94■□□□□ 0.46
COL9A3-209ENST00000469852 SERPINA10Q9UK55 444 aa17.94■□□□□ 0.46
COL9A3-209ENST00000469852 HDAC9Q9UKV0 1011 aa17.94■□□□□ 0.46
COL9A3-209ENST00000469852 DAGLAQ9Y4D2 1042 aa17.94■□□□□ 0.46
COL9A3-209ENST00000469852 MAST3O60307 1309 aa17.94■□□□□ 0.46
COL9A3-209ENST00000469852 ECM29Q5VYK3 1845 aa17.93■□□□□ 0.46
COL9A3-209ENST00000469852 TCRBV5S4A2TA0A5A2 114 aa17.93■□□□□ 0.46
COL9A3-209ENST00000469852 IQCA1LA6NCM1 817 aa17.93■□□□□ 0.46
COL9A3-209ENST00000469852 TRIM6-TRIM34B2RNG4 842 aa17.93■□□□□ 0.46
COL9A3-209ENST00000469852 VEGFAP15692 232 aaPredicted RBP17.93■□□□□ 0.46
COL9A3-209ENST00000469852 PDE6AP16499 860 aa17.93■□□□□ 0.46
COL9A3-209ENST00000469852 NBPF9Q3BBW0 867 aa17.93■□□□□ 0.46
COL9A3-209ENST00000469852 TEKT1Q969V4 418 aa17.93■□□□□ 0.46
COL9A3-209ENST00000469852 PRMT6Q96LA8 375 aaPredicted RBP17.93■□□□□ 0.46
COL9A3-209ENST00000469852 MROH7-TTC4A0A0A0MT08 1334 aa17.93■□□□□ 0.46
COL9A3-209ENST00000469852 GAKO14976 1311 aa17.93■□□□□ 0.46
COL9A3-209ENST00000469852 SPDYE2BA6NHP3 402 aa17.92■□□□□ 0.46
COL9A3-209ENST00000469852 WNT10BO00744 389 aa17.92■□□□□ 0.46
COL9A3-209ENST00000469852 SPDYE6P0CI01 402 aa17.92■□□□□ 0.46
COL9A3-209ENST00000469852 ADD2P35612 726 aa17.92■□□□□ 0.46
COL9A3-209ENST00000469852 RBM5P52756 815 aaKnown RBP eCLIP17.92■□□□□ 0.46
COL9A3-209ENST00000469852 HDLBPQ00341 1268 aaKnown RBP17.92■□□□□ 0.46
COL9A3-209ENST00000469852 MAP3K12Q12852 859 aa17.92■□□□□ 0.46
COL9A3-209ENST00000469852 SLC9C2Q5TAH2 1124 aa17.92■□□□□ 0.46
COL9A3-209ENST00000469852 NAA16Q6N069 864 aaPredicted RBP17.92■□□□□ 0.46
COL9A3-209ENST00000469852 APOBEC3HQ6NTF7 200 aaKnown RBP17.92■□□□□ 0.46
COL9A3-209ENST00000469852 HHIPL2Q6UWX4 724 aa17.92■□□□□ 0.46
COL9A3-209ENST00000469852 MTMR14Q8NCE2 650 aa17.92■□□□□ 0.46
COL9A3-209ENST00000469852 RILPL2Q969X0 211 aa17.92■□□□□ 0.46
COL9A3-209ENST00000469852 EVI5LQ96CN4 794 aa17.92■□□□□ 0.46
COL9A3-209ENST00000469852 FSD1Q9BTV5 496 aa17.92■□□□□ 0.46
COL9A3-209ENST00000469852 MRIQ9BWK5 157 aa17.92■□□□□ 0.46
COL9A3-209ENST00000469852 ZNF532Q9HCE3 1301 aa17.92■□□□□ 0.46
COL9A3-209ENST00000469852 SDSP20132 328 aa17.91■□□□□ 0.46
COL9A3-209ENST00000469852 CYP7A1P22680 504 aa17.91■□□□□ 0.46
COL9A3-209ENST00000469852 DLGAP5Q15398 846 aa17.91■□□□□ 0.46
COL9A3-209ENST00000469852 EAPPQ56P03 285 aaPredicted RBP17.91■□□□□ 0.46
COL9A3-209ENST00000469852 ZDHHC15Q96MV8 337 aa17.91■□□□□ 0.46
COL9A3-209ENST00000469852 BTDP43251 543 aa17.9■□□□□ 0.46
COL9A3-209ENST00000469852 USP50Q70EL3 339 aaPredicted RBP17.9■□□□□ 0.46
COL9A3-209ENST00000469852 CNTROBQ8N137 903 aa17.9■□□□□ 0.46
COL9A3-209ENST00000469852 MIGA1Q8NAN2 632 aa17.9■□□□□ 0.46
COL9A3-209ENST00000469852 FAM163AQ96GL9 167 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms