RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 PIP4K2BP78356 416 aa6.65□□□□□ -1.34
VPS8-220ENST00000469713 RASSF7Q02833 373 aa6.65□□□□□ -1.34
VPS8-220ENST00000469713 GSTM4Q03013 218 aa6.65□□□□□ -1.34
VPS8-220ENST00000469713 FAM117BQ6P1L5 589 aa6.65□□□□□ -1.34
VPS8-220ENST00000469713 ILDR2Q71H61 639 aa6.65□□□□□ -1.34
VPS8-220ENST00000469713 RELL1Q8IUW5 271 aa6.65□□□□□ -1.34
VPS8-220ENST00000469713 SULF2Q8IWU5 870 aa6.65□□□□□ -1.34
VPS8-220ENST00000469713 ZNF654Q8IZM8 581 aa6.65□□□□□ -1.34
VPS8-220ENST00000469713 PHC3Q8NDX5 983 aa6.65□□□□□ -1.34
VPS8-220ENST00000469713 TMEM74Q96NL1 305 aa6.65□□□□□ -1.34
VPS8-220ENST00000469713 ENAMQ9NRM1 1142 aa6.65□□□□□ -1.34
VPS8-220ENST00000469713 ADAMTS8Q9UP79 889 aa6.65□□□□□ -1.34
VPS8-220ENST00000469713 RLBP1P12271 317 aa6.64□□□□□ -1.35
VPS8-220ENST00000469713 BMP6P22004 513 aa6.64□□□□□ -1.35
VPS8-220ENST00000469713 NME2P22392 152 aa6.64□□□□□ -1.35
VPS8-220ENST00000469713 TNNI2P48788 182 aa6.64□□□□□ -1.35
VPS8-220ENST00000469713 C19orf57Q0VDD7 668 aa6.64□□□□□ -1.35
VPS8-220ENST00000469713 PWP1Q13610 501 aa6.64□□□□□ -1.35
VPS8-220ENST00000469713 SETDB1Q15047 1291 aa6.64□□□□□ -1.35
VPS8-220ENST00000469713 TMEM151AQ8N4L1 468 aa6.64□□□□□ -1.35
VPS8-220ENST00000469713 GALNT11Q8NCW6 608 aa6.64□□□□□ -1.35
VPS8-220ENST00000469713 WNT8BQ93098 351 aa6.64□□□□□ -1.35
VPS8-220ENST00000469713 TRIM11Q96F44 468 aa6.64□□□□□ -1.35
VPS8-220ENST00000469713 C8orf37Q96NL8 207 aa6.64□□□□□ -1.35
VPS8-220ENST00000469713 SOX17Q9H6I2 414 aaPredicted RBP6.64□□□□□ -1.35
VPS8-220ENST00000469713 OSGEPQ9NPF4 335 aa6.64□□□□□ -1.35
VPS8-220ENST00000469713 TM4SF5O14894 197 aa6.63□□□□□ -1.35
VPS8-220ENST00000469713 DEAF1O75398 565 aaPredicted RBP6.63□□□□□ -1.35
VPS8-220ENST00000469713 TFE3P19532 575 aaPredicted RBP6.63□□□□□ -1.35
VPS8-220ENST00000469713 ARNTP27540 789 aa6.63□□□□□ -1.35
VPS8-220ENST00000469713 ARL4DP49703 201 aa6.63□□□□□ -1.35
VPS8-220ENST00000469713 NAALADL2Q58DX5 795 aa6.63□□□□□ -1.35
VPS8-220ENST00000469713 TRAPPC3LQ5T215 181 aa6.63□□□□□ -1.35
VPS8-220ENST00000469713 LINC00114Q6XXX2 140 aa6.63□□□□□ -1.35
VPS8-220ENST00000469713 AGMOQ6ZNB7 445 aa6.63□□□□□ -1.35
VPS8-220ENST00000469713 GRIN3AQ8TCU5 1115 aa6.63□□□□□ -1.35
VPS8-220ENST00000469713 DDX54Q8TDD1 881 aaKnown RBP6.63□□□□□ -1.35
VPS8-220ENST00000469713 KLHDC7BQ96G42 594 aa6.63□□□□□ -1.35
VPS8-220ENST00000469713 RHOVQ96L33 236 aa6.63□□□□□ -1.35
VPS8-220ENST00000469713 ADAMTS1Q9UHI8 967 aa6.63□□□□□ -1.35
VPS8-220ENST00000469713 SAMM50Q9Y512 469 aa6.63□□□□□ -1.35
VPS8-220ENST00000469713 GDF11O95390 407 aa6.62□□□□□ -1.35
VPS8-220ENST00000469713 ECEL1O95672 775 aa6.62□□□□□ -1.35
VPS8-220ENST00000469713 PF4P02776 101 aa6.62□□□□□ -1.35
VPS8-220ENST00000469713 RPS26P62854 115 aaKnown RBP6.62□□□□□ -1.35
VPS8-220ENST00000469713 FAM160A1Q05DH4 1040 aa6.62□□□□□ -1.35
VPS8-220ENST00000469713 AP3B2Q13367 1082 aa6.62□□□□□ -1.35
VPS8-220ENST00000469713 TINF2Q9BSI4 451 aa6.62□□□□□ -1.35
VPS8-220ENST00000469713 CBX8Q9HC52 389 aa6.62□□□□□ -1.35
VPS8-220ENST00000469713 CAPN10Q9HC96 672 aa6.62□□□□□ -1.35
VPS8-220ENST00000469713 PCDHB5Q9Y5E4 795 aa6.62□□□□□ -1.35
VPS8-220ENST00000469713 DDX3YO15523 660 aaKnown RBP6.61□□□□□ -1.35
VPS8-220ENST00000469713 GARTP22102 1010 aa6.61□□□□□ -1.35
VPS8-220ENST00000469713 EIF4A3P38919 411 aaKnown RBP6.61□□□□□ -1.35
VPS8-220ENST00000469713 NLRP12P59046 1061 aa6.61□□□□□ -1.35
VPS8-220ENST00000469713 LMNB2Q03252 620 aa6.61□□□□□ -1.35
VPS8-220ENST00000469713 PAK2Q13177 524 aa6.61□□□□□ -1.35
VPS8-220ENST00000469713 CAMK2GQ13555 558 aaPredicted RBP6.61□□□□□ -1.35
VPS8-220ENST00000469713 PDZD3Q86UT5 571 aa6.61□□□□□ -1.35
VPS8-220ENST00000469713 KLHL23Q8NBE8 558 aa6.61□□□□□ -1.35
VPS8-220ENST00000469713 SPON2Q9BUD6 331 aa6.61□□□□□ -1.35
VPS8-220ENST00000469713 EMILIN2Q9BXX0 1053 aa6.61□□□□□ -1.35
VPS8-220ENST00000469713 ZC3H12CQ9C0D7 883 aaKnown RBP6.61□□□□□ -1.35
VPS8-220ENST00000469713 NRSN2Q9GZP1 204 aa6.61□□□□□ -1.35
VPS8-220ENST00000469713 KCNK4Q9NYG8 393 aa6.61□□□□□ -1.35
VPS8-220ENST00000469713 INPP5FQ9Y2H2 1132 aa6.61□□□□□ -1.35
VPS8-220ENST00000469713 A0A0A0MRY4 1105 aa6.6□□□□□ -1.35
VPS8-220ENST00000469713 FAM229AH3BQW9 127 aa6.6□□□□□ -1.35
VPS8-220ENST00000469713 ADAM11O75078 769 aa6.6□□□□□ -1.35
VPS8-220ENST00000469713 CTSBP07858 339 aa6.6□□□□□ -1.35
VPS8-220ENST00000469713 GSTP1P09211 210 aaKnown RBP6.6□□□□□ -1.35
VPS8-220ENST00000469713 MAOBP27338 520 aa6.6□□□□□ -1.35
VPS8-220ENST00000469713 ZNF252P-AS1Q0IIN9 211 aa6.6□□□□□ -1.35
VPS8-220ENST00000469713 SEPT6Q14141 434 aa6.6□□□□□ -1.35
VPS8-220ENST00000469713 LRRC14Q15048 493 aa6.6□□□□□ -1.35
VPS8-220ENST00000469713 POU4F3Q15319 338 aa6.6□□□□□ -1.35
VPS8-220ENST00000469713 FOXD4L6Q3SYB3 417 aaPredicted RBP6.6□□□□□ -1.35
VPS8-220ENST00000469713 SNAP47Q5SQN1 464 aa6.6□□□□□ -1.35
VPS8-220ENST00000469713 LLGL2Q6P1M3 1020 aa6.6□□□□□ -1.35
VPS8-220ENST00000469713 FBXL19Q6PCT2 694 aa6.6□□□□□ -1.35
VPS8-220ENST00000469713 FOXD4L3Q6VB84 417 aaPredicted RBP6.6□□□□□ -1.35
VPS8-220ENST00000469713 MPRIPQ6WCQ1 1025 aa6.6□□□□□ -1.35
VPS8-220ENST00000469713 KIAA0825Q8IV33 1275 aa6.6□□□□□ -1.35
VPS8-220ENST00000469713 MAP4K3Q8IVH8 894 aa6.6□□□□□ -1.35
VPS8-220ENST00000469713 DTWD1Q8N5C7 304 aa6.6□□□□□ -1.35
VPS8-220ENST00000469713 ZNF296Q8WUU4 475 aaPredicted RBP6.6□□□□□ -1.35
VPS8-220ENST00000469713 PLVAPQ9BX97 442 aa6.6□□□□□ -1.35
VPS8-220ENST00000469713 USP26Q9BXU7 913 aa6.6□□□□□ -1.35
VPS8-220ENST00000469713 MKL2Q9ULH7 1088 aa6.6□□□□□ -1.35
VPS8-220ENST00000469713 CYP8B1Q9UNU6 501 aa6.6□□□□□ -1.35
VPS8-220ENST00000469713 RNF225M0QZC1 329 aaPredicted RBP6.59□□□□□ -1.35
VPS8-220ENST00000469713 GNB5O14775 395 aa6.59□□□□□ -1.35
VPS8-220ENST00000469713 CYP11A1P05108 521 aa6.59□□□□□ -1.35
VPS8-220ENST00000469713 LMNB1P20700 586 aa6.59□□□□□ -1.35
VPS8-220ENST00000469713 CD68P34810 354 aaPredicted RBP6.59□□□□□ -1.35
VPS8-220ENST00000469713 RAC1P63000 192 aa6.59□□□□□ -1.35
VPS8-220ENST00000469713 MAP1SQ66K74 1059 aaPredicted RBP6.59□□□□□ -1.35
VPS8-220ENST00000469713 FBXO11Q86XK2 927 aa6.59□□□□□ -1.35
VPS8-220ENST00000469713 FMR1NBQ8N0W7 255 aaPredicted RBP6.59□□□□□ -1.35
VPS8-220ENST00000469713 GOLM1Q8NBJ4 401 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms