RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 RNF19AQ9NV58 838 aa9.13□□□□□ -0.95
PTCD3-208ENST00000469585 ADGRL2O95490 1459 aa9.13□□□□□ -0.95
PTCD3-208ENST00000469585 MROH2AA6NES4 1674 aa9.13□□□□□ -0.95
PTCD3-208ENST00000469585 NCOA1Q15788 1441 aa9.13□□□□□ -0.95
PTCD3-208ENST00000469585 RRBP1Q9P2E9 1410 aaKnown RBP9.13□□□□□ -0.95
PTCD3-208ENST00000469585 ZMYM3Q14202 1370 aa9.12□□□□□ -0.95
PTCD3-208ENST00000469585 EPXP11678 715 aa9.12□□□□□ -0.95
PTCD3-208ENST00000469585 EDN3P14138 238 aa9.12□□□□□ -0.95
PTCD3-208ENST00000469585 TBC1D8BQ0IIM8 1120 aa9.12□□□□□ -0.95
PTCD3-208ENST00000469585 PI16Q6UXB8 463 aa9.12□□□□□ -0.95
PTCD3-208ENST00000469585 HFE2Q6ZVN8 426 aa9.12□□□□□ -0.95
PTCD3-208ENST00000469585 NCAPG2Q86XI2 1143 aa9.12□□□□□ -0.95
PTCD3-208ENST00000469585 EPS8L3Q8TE67 593 aaKnown RBP9.12□□□□□ -0.95
PTCD3-208ENST00000469585 DUSP9Q99956 384 aaKnown RBP9.12□□□□□ -0.95
PTCD3-208ENST00000469585 LATS2Q9NRM7 1088 aa9.12□□□□□ -0.95
PTCD3-208ENST00000469585 NAGPAQ9UK23 515 aa9.12□□□□□ -0.95
PTCD3-208ENST00000469585 ZC3H13Q5T200 1668 aaKnown RBP9.12□□□□□ -0.95
PTCD3-208ENST00000469585 CLTCQ00610 1675 aaKnown RBP9.11□□□□□ -0.95
PTCD3-208ENST00000469585 ACPPP15309 386 aa9.11□□□□□ -0.95
PTCD3-208ENST00000469585 PARP2Q9UGN5 583 aa9.11□□□□□ -0.95
PTCD3-208ENST00000469585 NPATQ14207 1427 aa9.11□□□□□ -0.95
PTCD3-208ENST00000469585 A0A1W2PP55 124 aa9.1□□□□□ -0.95
PTCD3-208ENST00000469585 OIP5O43482 229 aa9.1□□□□□ -0.95
PTCD3-208ENST00000469585 CEBPAP49715 358 aaPredicted RBP9.1□□□□□ -0.95
PTCD3-208ENST00000469585 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.1□□□□□ -0.95
PTCD3-208ENST00000469585 KIAA0319Q5VV43 1072 aa9.1□□□□□ -0.95
PTCD3-208ENST00000469585 FAM35AQ86V20 835 aa9.1□□□□□ -0.95
PTCD3-208ENST00000469585 LRRC4BQ9NT99 713 aa9.1□□□□□ -0.95
PTCD3-208ENST00000469585 RNF17Q9BXT8 1623 aaKnown RBP9.09□□□□□ -0.95
PTCD3-208ENST00000469585 UNCXA6NJT0 531 aa9.09□□□□□ -0.95
PTCD3-208ENST00000469585 NFKBIEO00221 500 aa9.09□□□□□ -0.95
PTCD3-208ENST00000469585 CPB1P15086 417 aa9.09□□□□□ -0.95
PTCD3-208ENST00000469585 PERM1Q5SV97 790 aa9.09□□□□□ -0.95
PTCD3-208ENST00000469585 LYPD4Q6UWN0 246 aa9.09□□□□□ -0.95
PTCD3-208ENST00000469585 WHAMMQ8TF30 809 aa9.09□□□□□ -0.95
PTCD3-208ENST00000469585 EDARADDQ8WWZ3 215 aa9.09□□□□□ -0.95
PTCD3-208ENST00000469585 ZKSCAN3Q9BRR0 538 aa9.09□□□□□ -0.95
PTCD3-208ENST00000469585 DZANK1Q9NVP4 752 aa9.09□□□□□ -0.95
PTCD3-208ENST00000469585 STARD13Q9Y3M8 1113 aa9.09□□□□□ -0.95
PTCD3-208ENST00000469585 SETD1BQ9UPS6 1966 aaKnown RBP9.09□□□□□ -0.95
PTCD3-208ENST00000469585 PREX1Q8TCU6 1659 aa9.09□□□□□ -0.95
PTCD3-208ENST00000469585 CELA2BP08218 269 aaPredicted RBP9.08□□□□□ -0.96
PTCD3-208ENST00000469585 BCRP11274 1271 aa9.08□□□□□ -0.96
PTCD3-208ENST00000469585 EIF2AK2P19525 551 aaKnown RBP9.08□□□□□ -0.96
PTCD3-208ENST00000469585 GNA15P30679 374 aa9.08□□□□□ -0.96
PTCD3-208ENST00000469585 DAB2P98082 770 aa9.08□□□□□ -0.96
PTCD3-208ENST00000469585 GALNT6Q8NCL4 622 aa9.08□□□□□ -0.96
PTCD3-208ENST00000469585 SPACA7Q96KW9 195 aa9.08□□□□□ -0.96
PTCD3-208ENST00000469585 OSMRQ99650 979 aa9.08□□□□□ -0.96
PTCD3-208ENST00000469585 LPIN3Q9BQK8 851 aa9.08□□□□□ -0.96
PTCD3-208ENST00000469585 SUV39H2Q9H5I1 410 aa9.08□□□□□ -0.96
PTCD3-208ENST00000469585 NLRP2Q9NX02 1062 aa9.08□□□□□ -0.96
PTCD3-208ENST00000469585 FRRS1LQ9P0K9 344 aa9.08□□□□□ -0.96
PTCD3-208ENST00000469585 SIGLEC1Q9BZZ2 1709 aa9.08□□□□□ -0.96
PTCD3-208ENST00000469585 C3P01024 1663 aa9.07□□□□□ -0.96
PTCD3-208ENST00000469585 SHISA8B8ZZ34 492 aa9.07□□□□□ -0.96
PTCD3-208ENST00000469585 WIPF1O43516 503 aa9.07□□□□□ -0.96
PTCD3-208ENST00000469585 GHRHP01286 108 aa9.07□□□□□ -0.96
PTCD3-208ENST00000469585 ALAS2P22557 587 aa9.07□□□□□ -0.96
PTCD3-208ENST00000469585 ATP11AP98196 1134 aa9.07□□□□□ -0.96
PTCD3-208ENST00000469585 TMC4Q7Z404 712 aa9.07□□□□□ -0.96
PTCD3-208ENST00000469585 PLD4Q96BZ4 506 aa9.07□□□□□ -0.96
PTCD3-208ENST00000469585 FRMD6Q96NE9 622 aa9.07□□□□□ -0.96
PTCD3-208ENST00000469585 PBX4Q9BYU1 374 aa9.07□□□□□ -0.96
PTCD3-208ENST00000469585 OSBPL7Q9BZF2 842 aa9.07□□□□□ -0.96
PTCD3-208ENST00000469585 RASSF4Q9H2L5 321 aa9.07□□□□□ -0.96
PTCD3-208ENST00000469585 TNRQ92752 1358 aa9.07□□□□□ -0.96
PTCD3-208ENST00000469585 PZPP20742 1482 aa9.07□□□□□ -0.96
PTCD3-208ENST00000469585 PRDM15P57071 1507 aaPredicted RBP9.06□□□□□ -0.96
PTCD3-208ENST00000469585 TRPA1O75762 1119 aa9.06□□□□□ -0.96
PTCD3-208ENST00000469585 XPCQ01831 940 aaPredicted RBP9.06□□□□□ -0.96
PTCD3-208ENST00000469585 GRM2Q14416 872 aa9.06□□□□□ -0.96
PTCD3-208ENST00000469585 ZNF385CQ66K41 422 aaPredicted RBP9.06□□□□□ -0.96
PTCD3-208ENST00000469585 C20orf204Q6ZNR8 217 aa9.06□□□□□ -0.96
PTCD3-208ENST00000469585 THEMISQ8N1K5 641 aaPredicted RBP9.06□□□□□ -0.96
PTCD3-208ENST00000469585 GLIS3Q8NEA6 775 aa9.06□□□□□ -0.96
PTCD3-208ENST00000469585 FAM161BQ96MY7 647 aa9.06□□□□□ -0.96
PTCD3-208ENST00000469585 HHIPQ96QV1 700 aa9.06□□□□□ -0.96
PTCD3-208ENST00000469585 RBSNQ9H1K0 784 aa9.06□□□□□ -0.96
PTCD3-208ENST00000469585 SPG7Q9UQ90 795 aa9.06□□□□□ -0.96
PTCD3-208ENST00000469585 NUP155O75694 1391 aa9.06□□□□□ -0.96
PTCD3-208ENST00000469585 ABCC3O15438 1527 aa9.05□□□□□ -0.96
PTCD3-208ENST00000469585 NLRP1Q9C000 1473 aa9.05□□□□□ -0.96
PTCD3-208ENST00000469585 GIPC1O14908 333 aa9.05□□□□□ -0.96
PTCD3-208ENST00000469585 GADD45BO75293 160 aaPredicted RBP9.05□□□□□ -0.96
PTCD3-208ENST00000469585 RBM25P49756 843 aaKnown RBP9.05□□□□□ -0.96
PTCD3-208ENST00000469585 MRPL58Q14197 206 aaKnown RBP9.05□□□□□ -0.96
PTCD3-208ENST00000469585 PSAPL1Q6NUJ1 521 aa9.05□□□□□ -0.96
PTCD3-208ENST00000469585 ELMSAN1Q6PJG2 1045 aa9.05□□□□□ -0.96
PTCD3-208ENST00000469585 CCNJLQ8IV13 435 aa9.05□□□□□ -0.96
PTCD3-208ENST00000469585 TMEM102Q8N9M5 508 aaPredicted RBP9.05□□□□□ -0.96
PTCD3-208ENST00000469585 TTC9Q92623 222 aa9.05□□□□□ -0.96
PTCD3-208ENST00000469585 BTBD6Q96KE9 485 aa9.05□□□□□ -0.96
PTCD3-208ENST00000469585 TCF12Q99081 682 aa9.05□□□□□ -0.96
PTCD3-208ENST00000469585 BCO2Q9BYV7 579 aa9.05□□□□□ -0.96
PTCD3-208ENST00000469585 SMG9Q9H0W8 520 aaKnown RBP9.05□□□□□ -0.96
PTCD3-208ENST00000469585 EHD4Q9H223 541 aa9.05□□□□□ -0.96
PTCD3-208ENST00000469585 KIAA1522Q9P206 1035 aaPredicted RBP9.05□□□□□ -0.96
PTCD3-208ENST00000469585 ALBP02768 609 aa9.04□□□□□ -0.96
PTCD3-208ENST00000469585 PSMD2Q13200 908 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms