RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 CASP8AP2Q9UKL3 1982 aa13.73□□□□□ -0.21
COL4A3-204ENST00000469504 FRAT2O75474 233 aaPredicted RBP13.73□□□□□ -0.21
COL4A3-204ENST00000469504 TNNI2P48788 182 aa13.73□□□□□ -0.21
COL4A3-204ENST00000469504 LRRC24Q50LG9 513 aa13.73□□□□□ -0.21
COL4A3-204ENST00000469504 SLC10A4Q96EP9 437 aa13.73□□□□□ -0.21
COL4A3-204ENST00000469504 API5Q9BZZ5 524 aaKnown RBP13.73□□□□□ -0.21
COL4A3-204ENST00000469504 ECM29Q5VYK3 1845 aa13.73□□□□□ -0.21
COL4A3-204ENST00000469504 CLRN2A0PK11 232 aa13.72□□□□□ -0.21
COL4A3-204ENST00000469504 EYA2O00167 538 aa13.72□□□□□ -0.21
COL4A3-204ENST00000469504 MLLT1Q03111 559 aaPredicted RBP13.72□□□□□ -0.21
COL4A3-204ENST00000469504 PRKG1Q13976 671 aa13.72□□□□□ -0.21
COL4A3-204ENST00000469504 RASA3Q14644 834 aa13.72□□□□□ -0.21
COL4A3-204ENST00000469504 DZIP1LQ8IYY4 767 aaKnown RBP13.72□□□□□ -0.21
COL4A3-204ENST00000469504 ANKRD13AQ8IZ07 590 aa13.72□□□□□ -0.21
COL4A3-204ENST00000469504 LPIN2Q92539 896 aa13.72□□□□□ -0.21
COL4A3-204ENST00000469504 ZNF70Q9UC06 446 aaPredicted RBP13.72□□□□□ -0.21
COL4A3-204ENST00000469504 JAG2Q9Y219 1238 aa13.72□□□□□ -0.21
COL4A3-204ENST00000469504 SSC5DA1L4H1 1573 aa13.71□□□□□ -0.21
COL4A3-204ENST00000469504 ARAP2Q8WZ64 1704 aa13.71□□□□□ -0.21
COL4A3-204ENST00000469504 ZBTB22O15209 634 aa13.71□□□□□ -0.21
COL4A3-204ENST00000469504 CIAO1O76071 339 aa13.71□□□□□ -0.21
COL4A3-204ENST00000469504 UBTFL1P0CB47 393 aaPredicted RBP13.71□□□□□ -0.21
COL4A3-204ENST00000469504 SLC5A1P13866 664 aa13.71□□□□□ -0.21
COL4A3-204ENST00000469504 FGFR2P21802 821 aa13.71□□□□□ -0.21
COL4A3-204ENST00000469504 CRKP46108 304 aa13.71□□□□□ -0.21
COL4A3-204ENST00000469504 OTUD7BQ6GQQ9 843 aa13.71□□□□□ -0.21
COL4A3-204ENST00000469504 ARHGAP45Q92619 1136 aa13.71□□□□□ -0.21
COL4A3-204ENST00000469504 TEKT1Q969V4 418 aa13.71□□□□□ -0.21
COL4A3-204ENST00000469504 HOOK2Q96ED9 719 aa13.71□□□□□ -0.21
COL4A3-204ENST00000469504 GPR25O00155 361 aa13.7□□□□□ -0.22
COL4A3-204ENST00000469504 RFX5P48382 616 aaPredicted RBP13.7□□□□□ -0.22
COL4A3-204ENST00000469504 NBPF12Q5TAG4 269 aaPredicted RBP13.7□□□□□ -0.22
COL4A3-204ENST00000469504 FKBP1CQ5VVH2 108 aa13.7□□□□□ -0.22
COL4A3-204ENST00000469504 ZNF296Q8WUU4 475 aaPredicted RBP13.7□□□□□ -0.22
COL4A3-204ENST00000469504 CDCA7LQ96GN5 454 aa13.7□□□□□ -0.22
COL4A3-204ENST00000469504 WNK4Q96J92 1243 aa13.7□□□□□ -0.22
COL4A3-204ENST00000469504 PCDHAC2Q9Y5I4 1007 aa13.7□□□□□ -0.22
COL4A3-204ENST00000469504 TBC1D8O95759 1140 aa13.69□□□□□ -0.22
COL4A3-204ENST00000469504 WDR66Q8TBY9 1149 aa13.69□□□□□ -0.22
COL4A3-204ENST00000469504 ZDHHC15Q96MV8 337 aa13.69□□□□□ -0.22
COL4A3-204ENST00000469504 TDRD3Q9H7E2 651 aaKnown RBP13.69□□□□□ -0.22
COL4A3-204ENST00000469504 TMOD2Q9NZR1 351 aa13.69□□□□□ -0.22
COL4A3-204ENST00000469504 FKTNO75072 461 aa13.68□□□□□ -0.22
COL4A3-204ENST00000469504 USP2O75604 605 aaPredicted RBP13.68□□□□□ -0.22
COL4A3-204ENST00000469504 BCAMP50895 628 aa13.68□□□□□ -0.22
COL4A3-204ENST00000469504 MKRN3Q13064 507 aaKnown RBP13.68□□□□□ -0.22
COL4A3-204ENST00000469504 CHAF1AQ13111 956 aaPredicted RBP13.68□□□□□ -0.22
COL4A3-204ENST00000469504 HHIPL2Q6UWX4 724 aa13.68□□□□□ -0.22
COL4A3-204ENST00000469504 FAM83AQ86UY5 434 aa13.68□□□□□ -0.22
COL4A3-204ENST00000469504 IFNL1Q8IU54 200 aa13.68□□□□□ -0.22
COL4A3-204ENST00000469504 KLHDC4Q8TBB5 520 aa13.68□□□□□ -0.22
COL4A3-204ENST00000469504 GNL3LQ9NVN8 582 aaKnown RBP13.68□□□□□ -0.22
COL4A3-204ENST00000469504 NOB1Q9ULX3 412 aaKnown RBP13.68□□□□□ -0.22
COL4A3-204ENST00000469504 TESPA1A2RU30 521 aaPredicted RBP13.67□□□□□ -0.22
COL4A3-204ENST00000469504 SEMA3EO15041 775 aa13.67□□□□□ -0.22
COL4A3-204ENST00000469504 IL15P40933 162 aaPredicted RBP13.67□□□□□ -0.22
COL4A3-204ENST00000469504 CLMNQ96JQ2 1002 aa13.67□□□□□ -0.22
COL4A3-204ENST00000469504 TEPSINQ96N21 525 aa13.67□□□□□ -0.22
COL4A3-204ENST00000469504 CEP126Q9P2H0 1117 aa13.67□□□□□ -0.22
COL4A3-204ENST00000469504 RPAP1Q9BWH6 1393 aaPredicted RBP13.67□□□□□ -0.22
COL4A3-204ENST00000469504 LAMB1P07942 1786 aa13.66□□□□□ -0.22
COL4A3-204ENST00000469504 IPO8O15397 1037 aaKnown RBP13.66□□□□□ -0.22
COL4A3-204ENST00000469504 RARSP54136 660 aaKnown RBP13.66□□□□□ -0.22
COL4A3-204ENST00000469504 MAP3K9P80192 1104 aa13.66□□□□□ -0.22
COL4A3-204ENST00000469504 POLA2Q14181 598 aa13.66□□□□□ -0.22
COL4A3-204ENST00000469504 FBXO46Q6PJ61 603 aaPredicted RBP13.66□□□□□ -0.22
COL4A3-204ENST00000469504 ATG9AQ7Z3C6 839 aa13.66□□□□□ -0.22
COL4A3-204ENST00000469504 IQSEC3Q9UPP2 1182 aaPredicted RBP13.66□□□□□ -0.22
COL4A3-204ENST00000469504 CSADQ9Y600 493 aa13.66□□□□□ -0.22
COL4A3-204ENST00000469504 AOX1Q06278 1338 aa13.65□□□□□ -0.22
COL4A3-204ENST00000469504 SALL1Q9NSC2 1324 aa13.65□□□□□ -0.22
COL4A3-204ENST00000469504 TCP10L2B9ZVM9 353 aa13.65□□□□□ -0.22
COL4A3-204ENST00000469504 GNAI3P08754 354 aa13.65□□□□□ -0.22
COL4A3-204ENST00000469504 ATP2B3Q16720 1220 aa13.65□□□□□ -0.22
COL4A3-204ENST00000469504 INTS3Q68E01 1043 aaKnown RBP13.65□□□□□ -0.22
COL4A3-204ENST00000469504 ZGPATQ8N5A5 531 aaKnown RBP13.65□□□□□ -0.22
COL4A3-204ENST00000469504 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.65□□□□□ -0.22
COL4A3-204ENST00000469504 TMEM39BQ9GZU3 492 aa13.65□□□□□ -0.22
COL4A3-204ENST00000469504 COPRSQ9NQ92 184 aa13.65□□□□□ -0.22
COL4A3-204ENST00000469504 FZD1Q9UP38 647 aa13.65□□□□□ -0.22
COL4A3-204ENST00000469504 HPS5Q9UPZ3 1129 aa13.65□□□□□ -0.22
COL4A3-204ENST00000469504 GTF2A2P52657 109 aa13.64□□□□□ -0.23
COL4A3-204ENST00000469504 DCAF15Q66K64 600 aa13.64□□□□□ -0.23
COL4A3-204ENST00000469504 APOBEC3HQ6NTF7 200 aaKnown RBP13.64□□□□□ -0.23
COL4A3-204ENST00000469504 OPTNQ96CV9 577 aa13.64□□□□□ -0.23
COL4A3-204ENST00000469504 DENND2AQ9ULE3 1009 aa13.64□□□□□ -0.23
COL4A3-204ENST00000469504 LRRFIP2Q9Y608 721 aaKnown RBP13.64□□□□□ -0.23
COL4A3-204ENST00000469504 PDS5AQ29RF7 1337 aaKnown RBP13.64□□□□□ -0.23
COL4A3-204ENST00000469504 IGF2BP3O00425 579 aaKnown RBP eCLIP13.63□□□□□ -0.23
COL4A3-204ENST00000469504 WDHD1O75717 1129 aaPredicted RBP13.63□□□□□ -0.23
COL4A3-204ENST00000469504 MTX1Q13505 466 aa13.63□□□□□ -0.23
COL4A3-204ENST00000469504 VGLL4Q14135 290 aa13.63□□□□□ -0.23
COL4A3-204ENST00000469504 GRIK5Q16478 980 aa13.63□□□□□ -0.23
COL4A3-204ENST00000469504 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.63□□□□□ -0.23
COL4A3-204ENST00000469504 ERO1AQ96HE7 468 aa13.63□□□□□ -0.23
COL4A3-204ENST00000469504 ELP3Q9H9T3 547 aa13.63□□□□□ -0.23
COL4A3-204ENST00000469504 ZCCHC17Q9NP64 241 aaKnown RBP13.63□□□□□ -0.23
COL4A3-204ENST00000469504 AKAP2Q9Y2D5 859 aa13.63□□□□□ -0.23
COL4A3-204ENST00000469504 SPDYE5A6NIY4 337 aa13.62□□□□□ -0.23
COL4A3-204ENST00000469504 LDHBP07195 334 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms