RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 TCP10L2B9ZVM9 353 aa15.44■□□□□ 0.06
COL5A1-207ENST00000469093 LRRC24Q50LG9 513 aa15.44■□□□□ 0.06
COL5A1-207ENST00000469093 ANKRD44Q8N8A2 993 aa15.44■□□□□ 0.06
COL5A1-207ENST00000469093 OPTNQ96CV9 577 aa15.44■□□□□ 0.06
COL5A1-207ENST00000469093 ERO1AQ96HE7 468 aa15.44■□□□□ 0.06
COL5A1-207ENST00000469093 TMEM39BQ9GZU3 492 aa15.44■□□□□ 0.06
COL5A1-207ENST00000469093 IQSEC3Q9UPP2 1182 aaPredicted RBP15.44■□□□□ 0.06
COL5A1-207ENST00000469093 A0A1B0GUL6 1792 aa15.44■□□□□ 0.06
COL5A1-207ENST00000469093 KIAA0100Q14667 2235 aaKnown RBP15.43■□□□□ 0.06
COL5A1-207ENST00000469093 MAP3K9P80192 1104 aa15.43■□□□□ 0.06
COL5A1-207ENST00000469093 HDLBPQ00341 1268 aaKnown RBP15.43■□□□□ 0.06
COL5A1-207ENST00000469093 INTS3Q68E01 1043 aaKnown RBP15.43■□□□□ 0.06
COL5A1-207ENST00000469093 VPS37DQ86XT2 251 aa15.43■□□□□ 0.06
COL5A1-207ENST00000469093 MRPL50Q8N5N7 158 aaKnown RBP15.43■□□□□ 0.06
COL5A1-207ENST00000469093 VGLL2Q8N8G2 317 aa15.43■□□□□ 0.06
COL5A1-207ENST00000469093 CD99L2Q8TCZ2 262 aa15.43■□□□□ 0.06
COL5A1-207ENST00000469093 CNKSR2Q8WXI2 1034 aa15.43■□□□□ 0.06
COL5A1-207ENST00000469093 PCDH10Q9P2E7 1040 aa15.43■□□□□ 0.06
COL5A1-207ENST00000469093 PTPN22Q9Y2R2 807 aa15.43■□□□□ 0.06
COL5A1-207ENST00000469093 ECM29Q5VYK3 1845 aa15.43■□□□□ 0.06
COL5A1-207ENST00000469093 ZNF521Q96K83 1311 aa15.43■□□□□ 0.06
COL5A1-207ENST00000469093 ZNF316A6NFI3 1004 aaPredicted RBP15.42■□□□□ 0.06
COL5A1-207ENST00000469093 PDE8BO95263 885 aa15.42■□□□□ 0.06
COL5A1-207ENST00000469093 TNNI2P48788 182 aa15.42■□□□□ 0.06
COL5A1-207ENST00000469093 CAP1Q01518 475 aa15.42■□□□□ 0.06
COL5A1-207ENST00000469093 SP3Q02447 781 aa15.42■□□□□ 0.06
COL5A1-207ENST00000469093 CHAF1AQ13111 956 aaPredicted RBP15.42■□□□□ 0.06
COL5A1-207ENST00000469093 CAVIN4Q5BKX8 364 aa15.42■□□□□ 0.06
COL5A1-207ENST00000469093 METTL24Q5JXM2 366 aa15.42■□□□□ 0.06
COL5A1-207ENST00000469093 BRI3BPQ8WY22 251 aa15.42■□□□□ 0.06
COL5A1-207ENST00000469093 MRIQ9BWK5 157 aa15.42■□□□□ 0.06
COL5A1-207ENST00000469093 POTEFA5A3E0 1075 aa15.41■□□□□ 0.06
COL5A1-207ENST00000469093 BCAMP50895 628 aa15.41■□□□□ 0.06
COL5A1-207ENST00000469093 CACNB3P54284 484 aa15.41■□□□□ 0.06
COL5A1-207ENST00000469093 VGLL4Q14135 290 aa15.41■□□□□ 0.06
COL5A1-207ENST00000469093 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.41■□□□□ 0.06
COL5A1-207ENST00000469093 KLHDC4Q8TBB5 520 aa15.41■□□□□ 0.06
COL5A1-207ENST00000469093 TBC1D22AQ8WUA7 517 aa15.41■□□□□ 0.06
COL5A1-207ENST00000469093 USP44Q9H0E7 712 aa15.41■□□□□ 0.06
COL5A1-207ENST00000469093 EFCC1Q9HA90 598 aa15.41■□□□□ 0.06
COL5A1-207ENST00000469093 FRAT2O75474 233 aaPredicted RBP15.4■□□□□ 0.06
COL5A1-207ENST00000469093 TEKT1Q969V4 418 aa15.4■□□□□ 0.06
COL5A1-207ENST00000469093 ZDHHC15Q96MV8 337 aa15.4■□□□□ 0.06
COL5A1-207ENST00000469093 CCL15-CCL14A0A0B4J2E2 113 aa15.39■□□□□ 0.05
COL5A1-207ENST00000469093 GTF2A2P52657 109 aa15.39■□□□□ 0.05
COL5A1-207ENST00000469093 CCL15Q16663 113 aa15.39■□□□□ 0.05
COL5A1-207ENST00000469093 APOBEC3HQ6NTF7 200 aaKnown RBP15.39■□□□□ 0.05
COL5A1-207ENST00000469093 SSH1Q8WYL5 1049 aa15.39■□□□□ 0.05
COL5A1-207ENST00000469093 ARMC5Q96C12 935 aa15.39■□□□□ 0.05
COL5A1-207ENST00000469093 OTUD5Q96G74 571 aa15.39■□□□□ 0.05
COL5A1-207ENST00000469093 CSADQ9Y600 493 aa15.39■□□□□ 0.05
COL5A1-207ENST00000469093 SPDYE5A6NIY4 337 aa15.38■□□□□ 0.05
COL5A1-207ENST00000469093 FGFR2P21802 821 aa15.38■□□□□ 0.05
COL5A1-207ENST00000469093 FAM43AQ8N2R8 423 aa15.38■□□□□ 0.05
COL5A1-207ENST00000469093 ZFYVE28Q9HCC9 887 aa15.38■□□□□ 0.05
COL5A1-207ENST00000469093 SUGT1Q9Y2Z0 365 aa15.38■□□□□ 0.05
COL5A1-207ENST00000469093 PTPRCP08575 1304 aa15.38■□□□□ 0.05
COL5A1-207ENST00000469093 ZEB1P37275 1124 aaPredicted RBP15.37■□□□□ 0.05
COL5A1-207ENST00000469093 TAF1CQ15572 869 aaPredicted RBP15.37■□□□□ 0.05
COL5A1-207ENST00000469093 FKBP1CQ5VVH2 108 aa15.37■□□□□ 0.05
COL5A1-207ENST00000469093 FAM83AQ86UY5 434 aa15.37■□□□□ 0.05
COL5A1-207ENST00000469093 ZKSCAN4Q969J2 545 aaPredicted RBP15.37■□□□□ 0.05
COL5A1-207ENST00000469093 SNCAIPQ9Y6H5 919 aa15.37■□□□□ 0.05
COL5A1-207ENST00000469093 LAMB1P07942 1786 aa15.36■□□□□ 0.05
COL5A1-207ENST00000469093 IFIT1P09914 478 aaKnown RBP15.36■□□□□ 0.05
COL5A1-207ENST00000469093 EN2P19622 333 aaPredicted RBP15.36■□□□□ 0.05
COL5A1-207ENST00000469093 RFX5P48382 616 aaPredicted RBP15.36■□□□□ 0.05
COL5A1-207ENST00000469093 PUM3Q15397 648 aaKnown RBP15.36■□□□□ 0.05
COL5A1-207ENST00000469093 HHIPL2Q6UWX4 724 aa15.36■□□□□ 0.05
COL5A1-207ENST00000469093 ERO1BQ86YB8 467 aa15.36■□□□□ 0.05
COL5A1-207ENST00000469093 KIF16BQ96L93 1317 aa15.36■□□□□ 0.05
COL5A1-207ENST00000469093 E9PSI1 815 aa15.35■□□□□ 0.05
COL5A1-207ENST00000469093 EYA2O00167 538 aa15.35■□□□□ 0.05
COL5A1-207ENST00000469093 IRF6O14896 467 aa15.35■□□□□ 0.05
COL5A1-207ENST00000469093 CETPP11597 493 aa15.35■□□□□ 0.05
COL5A1-207ENST00000469093 ARHGEF6Q15052 776 aa15.35■□□□□ 0.05
COL5A1-207ENST00000469093 WRNIP1Q96S55 665 aa15.35■□□□□ 0.05
COL5A1-207ENST00000469093 TMOD2Q9NZR1 351 aa15.35■□□□□ 0.05
COL5A1-207ENST00000469093 HTTP42858 3142 aa15.34■□□□□ 0.05
COL5A1-207ENST00000469093 BTBD19C9JJ37 291 aa15.34■□□□□ 0.05
COL5A1-207ENST00000469093 TLR2O60603 784 aa15.34■□□□□ 0.05
COL5A1-207ENST00000469093 SLFN5Q08AF3 891 aa15.34■□□□□ 0.05
COL5A1-207ENST00000469093 MIGA2Q7L4E1 593 aa15.34■□□□□ 0.05
COL5A1-207ENST00000469093 ATG9AQ7Z3C6 839 aa15.34■□□□□ 0.05
COL5A1-207ENST00000469093 WDR66Q8TBY9 1149 aa15.34■□□□□ 0.05
COL5A1-207ENST00000469093 LPIN2Q92539 896 aa15.34■□□□□ 0.05
COL5A1-207ENST00000469093 HOOK2Q96ED9 719 aa15.34■□□□□ 0.05
COL5A1-207ENST00000469093 ZNF333Q96JL9 665 aa15.34■□□□□ 0.05
COL5A1-207ENST00000469093 PTCH2Q9Y6C5 1203 aa15.34■□□□□ 0.05
COL5A1-207ENST00000469093 MAST3O60307 1309 aa15.34■□□□□ 0.05
COL5A1-207ENST00000469093 OTOFQ9HC10 1997 aa15.33■□□□□ 0.05
COL5A1-207ENST00000469093 SNAPC2Q13487 334 aa15.33■□□□□ 0.04
COL5A1-207ENST00000469093 TMEM106CQ9BVX2 250 aa15.33■□□□□ 0.04
COL5A1-207ENST00000469093 ZCCHC17Q9NP64 241 aaKnown RBP15.33■□□□□ 0.04
COL5A1-207ENST00000469093 WDHD1O75717 1129 aaPredicted RBP15.32■□□□□ 0.04
COL5A1-207ENST00000469093 SLC5A1P13866 664 aa15.32■□□□□ 0.04
COL5A1-207ENST00000469093 INPP5BP32019 993 aa15.32■□□□□ 0.04
COL5A1-207ENST00000469093 PPIL2Q13356 520 aa15.32■□□□□ 0.04
COL5A1-207ENST00000469093 DCAF15Q66K64 600 aa15.32■□□□□ 0.04
COL5A1-207ENST00000469093 CDC42EP5Q6NZY7 148 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms