RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 MS4A4AQ96JQ5 239 aa16.57■□□□□ 0.24
PTPN7-207ENST00000468385 PUS3Q9BZE2 481 aaKnown RBP16.57■□□□□ 0.24
PTPN7-207ENST00000468385 C9orf78Q9NZ63 289 aaPredicted RBP16.57■□□□□ 0.24
PTPN7-207ENST00000468385 ALDH1L1O75891 902 aa16.56■□□□□ 0.24
PTPN7-207ENST00000468385 SP3Q02447 781 aa16.56■□□□□ 0.24
PTPN7-207ENST00000468385 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.56■□□□□ 0.24
PTPN7-207ENST00000468385 DZIP1LQ8IYY4 767 aaKnown RBP16.56■□□□□ 0.24
PTPN7-207ENST00000468385 ARMC5Q96C12 935 aa16.56■□□□□ 0.24
PTPN7-207ENST00000468385 SUCLG2Q96I99 432 aa16.56■□□□□ 0.24
PTPN7-207ENST00000468385 EFCC1Q9HA90 598 aa16.56■□□□□ 0.24
PTPN7-207ENST00000468385 MRS2Q9HD23 443 aa16.56■□□□□ 0.24
PTPN7-207ENST00000468385 ARAP2Q8WZ64 1704 aa16.56■□□□□ 0.24
PTPN7-207ENST00000468385 TCP10L2B9ZVM9 353 aa16.55■□□□□ 0.24
PTPN7-207ENST00000468385 CRKP46108 304 aa16.55■□□□□ 0.24
PTPN7-207ENST00000468385 GRIK5Q16478 980 aa16.55■□□□□ 0.24
PTPN7-207ENST00000468385 TMEM39BQ9GZU3 492 aa16.55■□□□□ 0.24
PTPN7-207ENST00000468385 RBBP6Q7Z6E9 1792 aaKnown RBP16.54■□□□□ 0.24
PTPN7-207ENST00000468385 VGLL4Q14135 290 aa16.54■□□□□ 0.24
PTPN7-207ENST00000468385 SLC4A10Q6U841 1118 aa16.54■□□□□ 0.24
PTPN7-207ENST00000468385 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.54■□□□□ 0.24
PTPN7-207ENST00000468385 BRI3BPQ8WY22 251 aa16.54■□□□□ 0.24
PTPN7-207ENST00000468385 GCC1Q96CN9 775 aa16.54■□□□□ 0.24
PTPN7-207ENST00000468385 SRCIN1Q9C0H9 1055 aa16.54■□□□□ 0.24
PTPN7-207ENST00000468385 RIPOR2Q9Y4F9 1068 aa16.54■□□□□ 0.24
PTPN7-207ENST00000468385 NBPF7P0C2Y1 421 aaPredicted RBP16.53■□□□□ 0.24
PTPN7-207ENST00000468385 MAP3K9P80192 1104 aa16.53■□□□□ 0.24
PTPN7-207ENST00000468385 FBXO33Q7Z6M2 555 aa16.53■□□□□ 0.24
PTPN7-207ENST00000468385 UTYO14607 1347 aa16.52■□□□□ 0.24
PTPN7-207ENST00000468385 MROH5Q6ZUA9 1318 aa16.52■□□□□ 0.24
PTPN7-207ENST00000468385 CCL15-CCL14A0A0B4J2E2 113 aa16.52■□□□□ 0.24
PTPN7-207ENST00000468385 EN2P19622 333 aaPredicted RBP16.52■□□□□ 0.24
PTPN7-207ENST00000468385 TNNI2P48788 182 aa16.52■□□□□ 0.24
PTPN7-207ENST00000468385 CCL15Q16663 113 aa16.52■□□□□ 0.24
PTPN7-207ENST00000468385 IQSEC3Q9UPP2 1182 aaPredicted RBP16.52■□□□□ 0.24
PTPN7-207ENST00000468385 GTF2A2P52657 109 aa16.51■□□□□ 0.23
PTPN7-207ENST00000468385 TAF1CQ15572 869 aaPredicted RBP16.51■□□□□ 0.23
PTPN7-207ENST00000468385 RABL6Q3YEC7 729 aaPredicted RBP16.51■□□□□ 0.23
PTPN7-207ENST00000468385 LRRC24Q50LG9 513 aa16.51■□□□□ 0.23
PTPN7-207ENST00000468385 FAM43AQ8N2R8 423 aa16.51■□□□□ 0.23
PTPN7-207ENST00000468385 ZFYVE28Q9HCC9 887 aa16.51■□□□□ 0.23
PTPN7-207ENST00000468385 ZBTB22O15209 634 aa16.5■□□□□ 0.23
PTPN7-207ENST00000468385 CACNB3P54284 484 aa16.5■□□□□ 0.23
PTPN7-207ENST00000468385 HDLBPQ00341 1268 aaKnown RBP16.5■□□□□ 0.23
PTPN7-207ENST00000468385 CHAF1AQ13111 956 aaPredicted RBP16.5■□□□□ 0.23
PTPN7-207ENST00000468385 HABP4Q5JVS0 413 aaKnown RBP16.5■□□□□ 0.23
PTPN7-207ENST00000468385 VGLL2Q8N8G2 317 aa16.5■□□□□ 0.23
PTPN7-207ENST00000468385 OTUD5Q96G74 571 aa16.5■□□□□ 0.23
PTPN7-207ENST00000468385 ZNF333Q96JL9 665 aa16.5■□□□□ 0.23
PTPN7-207ENST00000468385 BICC1Q9H694 974 aaKnown RBP16.5■□□□□ 0.23
PTPN7-207ENST00000468385 CSADQ9Y600 493 aa16.5■□□□□ 0.23
PTPN7-207ENST00000468385 SPDYE5A6NIY4 337 aa16.49■□□□□ 0.23
PTPN7-207ENST00000468385 VPS37DQ86XT2 251 aa16.49■□□□□ 0.23
PTPN7-207ENST00000468385 ANKRD44Q8N8A2 993 aa16.49■□□□□ 0.23
PTPN7-207ENST00000468385 TBC1D22AQ8WUA7 517 aa16.49■□□□□ 0.23
PTPN7-207ENST00000468385 PTCH2Q9Y6C5 1203 aa16.49■□□□□ 0.23
PTPN7-207ENST00000468385 SNCAIPQ9Y6H5 919 aa16.49■□□□□ 0.23
PTPN7-207ENST00000468385 PDE8BO95263 885 aa16.48■□□□□ 0.23
PTPN7-207ENST00000468385 METTL24Q5JXM2 366 aa16.48■□□□□ 0.23
PTPN7-207ENST00000468385 TEKT1Q969V4 418 aa16.48■□□□□ 0.23
PTPN7-207ENST00000468385 MRIQ9BWK5 157 aa16.48■□□□□ 0.23
PTPN7-207ENST00000468385 KIAA0100Q14667 2235 aaKnown RBP16.47■□□□□ 0.23
PTPN7-207ENST00000468385 BCAMP50895 628 aa16.47■□□□□ 0.23
PTPN7-207ENST00000468385 ARHGEF6Q15052 776 aa16.47■□□□□ 0.23
PTPN7-207ENST00000468385 CAVIN4Q5BKX8 364 aa16.47■□□□□ 0.23
PTPN7-207ENST00000468385 APOBEC3HQ6NTF7 200 aaKnown RBP16.47■□□□□ 0.23
PTPN7-207ENST00000468385 FAM83AQ86UY5 434 aa16.47■□□□□ 0.23
PTPN7-207ENST00000468385 ZDHHC15Q96MV8 337 aa16.47■□□□□ 0.23
PTPN7-207ENST00000468385 TMEM106CQ9BVX2 250 aa16.47■□□□□ 0.23
PTPN7-207ENST00000468385 TLR2O60603 784 aa16.46■□□□□ 0.23
PTPN7-207ENST00000468385 FRAT2O75474 233 aaPredicted RBP16.46■□□□□ 0.23
PTPN7-207ENST00000468385 SLC9C1Q4G0N8 1177 aa16.46■□□□□ 0.23
PTPN7-207ENST00000468385 NBPF11Q86T75 865 aa16.46■□□□□ 0.23
PTPN7-207ENST00000468385 ERO1BQ86YB8 467 aa16.46■□□□□ 0.23
PTPN7-207ENST00000468385 KLHDC4Q8TBB5 520 aa16.46■□□□□ 0.23
PTPN7-207ENST00000468385 ZKSCAN4Q969J2 545 aaPredicted RBP16.46■□□□□ 0.23
PTPN7-207ENST00000468385 WRNIP1Q96S55 665 aa16.46■□□□□ 0.23
PTPN7-207ENST00000468385 ARHGAP39Q9C0H5 1083 aa16.46■□□□□ 0.23
PTPN7-207ENST00000468385 ZCCHC17Q9NP64 241 aaKnown RBP16.46■□□□□ 0.23
PTPN7-207ENST00000468385 BTBD19C9JJ37 291 aa16.45■□□□□ 0.22
PTPN7-207ENST00000468385 IRF6O14896 467 aa16.45■□□□□ 0.22
PTPN7-207ENST00000468385 ANP32CO43423 234 aa16.45■□□□□ 0.22
PTPN7-207ENST00000468385 CETPP11597 493 aa16.45■□□□□ 0.22
PTPN7-207ENST00000468385 FGFR2P21802 821 aa16.45■□□□□ 0.22
PTPN7-207ENST00000468385 FKBP1CQ5VVH2 108 aa16.45■□□□□ 0.22
PTPN7-207ENST00000468385 MRPL50Q8N5N7 158 aaKnown RBP16.45■□□□□ 0.22
PTPN7-207ENST00000468385 TMOD2Q9NZR1 351 aa16.45■□□□□ 0.22
PTPN7-207ENST00000468385 SUGT1Q9Y2Z0 365 aa16.45■□□□□ 0.22
PTPN7-207ENST00000468385 ZSWIM8A7E2V4 1837 aa16.45■□□□□ 0.22
PTPN7-207ENST00000468385 RPAP1Q9BWH6 1393 aaPredicted RBP16.44■□□□□ 0.22
PTPN7-207ENST00000468385 LACTBP83111 547 aaPredicted RBP16.44■□□□□ 0.22
PTPN7-207ENST00000468385 PPIL2Q13356 520 aa16.44■□□□□ 0.22
PTPN7-207ENST00000468385 SNAPC2Q13487 334 aa16.44■□□□□ 0.22
PTPN7-207ENST00000468385 HHIPL2Q6UWX4 724 aa16.44■□□□□ 0.22
PTPN7-207ENST00000468385 MAST3O60307 1309 aa16.44■□□□□ 0.22
PTPN7-207ENST00000468385 ZNF521Q96K83 1311 aa16.44■□□□□ 0.22
PTPN7-207ENST00000468385 KIF16BQ96L93 1317 aa16.44■□□□□ 0.22
PTPN7-207ENST00000468385 WDHD1O75717 1129 aaPredicted RBP16.43■□□□□ 0.22
PTPN7-207ENST00000468385 SLC4A8Q2Y0W8 1093 aa16.43■□□□□ 0.22
PTPN7-207ENST00000468385 SH3TC2Q8TF17 1288 aa16.43■□□□□ 0.22
PTPN7-207ENST00000468385 HOOK2Q96ED9 719 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms