RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 WNK4Q96J92 1243 aa30.67■■■□□ 2.5
PTCH1-210ENST00000468211 CCER2I3L3R5 266 aa30.66■■■□□ 2.5
PTCH1-210ENST00000468211 FRAT2O75474 233 aaPredicted RBP30.66■■■□□ 2.5
PTCH1-210ENST00000468211 PUM3Q15397 648 aaKnown RBP30.66■■■□□ 2.5
PTCH1-210ENST00000468211 TEPSINQ96N21 525 aa30.66■■■□□ 2.5
PTCH1-210ENST00000468211 TCP10L2B9ZVM9 353 aa30.65■■■□□ 2.5
PTCH1-210ENST00000468211 GPR25O00155 361 aa30.65■■■□□ 2.5
PTCH1-210ENST00000468211 CT47B1P0C2W7 299 aaPredicted RBP30.65■■■□□ 2.5
PTCH1-210ENST00000468211 UBTFL1P0CB47 393 aaPredicted RBP30.64■■■□□ 2.5
PTCH1-210ENST00000468211 GJA5P36382 358 aa30.64■■■□□ 2.5
PTCH1-210ENST00000468211 MLLT1Q03111 559 aaPredicted RBP30.64■■■□□ 2.5
PTCH1-210ENST00000468211 TNFAIP1Q13829 316 aa30.64■■■□□ 2.5
PTCH1-210ENST00000468211 TBC1D22AQ8WUA7 517 aa30.64■■■□□ 2.5
PTCH1-210ENST00000468211 KIF16BQ96L93 1317 aa30.64■■■□□ 2.5
PTCH1-210ENST00000468211 IFIT1P09914 478 aaKnown RBP30.63■■■□□ 2.49
PTCH1-210ENST00000468211 ZBTB48P10074 688 aaPredicted RBP30.63■■■□□ 2.49
PTCH1-210ENST00000468211 IREB2P48200 963 aaKnown RBP30.63■■■□□ 2.49
PTCH1-210ENST00000468211 CFHR5Q9BXR6 569 aa30.63■■■□□ 2.49
PTCH1-210ENST00000468211 TMEM39BQ9GZU3 492 aa30.63■■■□□ 2.49
PTCH1-210ENST00000468211 MANSC4A6NHS7 340 aaPredicted RBP30.62■■■□□ 2.49
PTCH1-210ENST00000468211 CACNB3P54284 484 aa30.62■■■□□ 2.49
PTCH1-210ENST00000468211 HDLBPQ00341 1268 aaKnown RBP30.62■■■□□ 2.49
PTCH1-210ENST00000468211 NOM1Q5C9Z4 860 aaKnown RBP30.62■■■□□ 2.49
PTCH1-210ENST00000468211 SIL1Q9H173 461 aa30.62■■■□□ 2.49
PTCH1-210ENST00000468211 UNCXA6NJT0 531 aa30.61■■■□□ 2.49
PTCH1-210ENST00000468211 IGF2BP3O00425 579 aaKnown RBP eCLIP30.61■■■□□ 2.49
PTCH1-210ENST00000468211 IFNL1Q8IU54 200 aa30.61■■■□□ 2.49
PTCH1-210ENST00000468211 TNRC18O15417 2968 aaPredicted RBP30.6■■■□□ 2.49
PTCH1-210ENST00000468211 RARSP54136 660 aaKnown RBP30.6■■■□□ 2.49
PTCH1-210ENST00000468211 ANKRD13AQ8IZ07 590 aa30.6■■■□□ 2.49
PTCH1-210ENST00000468211 LPIN2Q92539 896 aa30.6■■■□□ 2.49
PTCH1-210ENST00000468211 TEKT1Q969V4 418 aa30.6■■■□□ 2.49
PTCH1-210ENST00000468211 API5Q9BZZ5 524 aaKnown RBP30.6■■■□□ 2.49
PTCH1-210ENST00000468211 LRRFIP2Q9Y608 721 aaKnown RBP30.6■■■□□ 2.49
PTCH1-210ENST00000468211 SLC5A1P13866 664 aa30.59■■■□□ 2.49
PTCH1-210ENST00000468211 SOX10P56693 466 aa30.58■■■□□ 2.49
PTCH1-210ENST00000468211 INHBEP58166 350 aa30.58■■■□□ 2.49
PTCH1-210ENST00000468211 ZDHHC15Q96MV8 337 aa30.58■■■□□ 2.49
PTCH1-210ENST00000468211 MEIS3Q99687 375 aa30.58■■■□□ 2.49
PTCH1-210ENST00000468211 ELP3Q9H9T3 547 aa30.58■■■□□ 2.49
PTCH1-210ENST00000468211 HPS5Q9UPZ3 1129 aa30.58■■■□□ 2.49
PTCH1-210ENST00000468211 PA2G4Q9UQ80 394 aaKnown RBP30.58■■■□□ 2.49
PTCH1-210ENST00000468211 APOBEC3HQ6NTF7 200 aaKnown RBP30.57■■■□□ 2.48
PTCH1-210ENST00000468211 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.57■■■□□ 2.48
PTCH1-210ENST00000468211 FKTNO75072 461 aa30.56■■■□□ 2.48
PTCH1-210ENST00000468211 CIAO1O76071 339 aa30.56■■■□□ 2.48
PTCH1-210ENST00000468211 ALDH1A1P00352 501 aa30.56■■■□□ 2.48
PTCH1-210ENST00000468211 TNNI2P48788 182 aa30.56■■■□□ 2.48
PTCH1-210ENST00000468211 CNKSR2Q8WXI2 1034 aa30.56■■■□□ 2.48
PTCH1-210ENST00000468211 MRIQ9BWK5 157 aa30.56■■■□□ 2.48
PTCH1-210ENST00000468211 OPTNQ96CV9 577 aa30.55■■■□□ 2.48
PTCH1-210ENST00000468211 PTPN18Q99952 460 aa30.55■■■□□ 2.48
PTCH1-210ENST00000468211 SUGT1Q9Y2Z0 365 aa30.55■■■□□ 2.48
PTCH1-210ENST00000468211 ATP2B3Q16720 1220 aa30.54■■■□□ 2.48
PTCH1-210ENST00000468211 FBXO3Q9UK99 471 aa30.54■■■□□ 2.48
PTCH1-210ENST00000468211 PKN2Q16513 984 aaKnown RBP30.53■■■□□ 2.48
PTCH1-210ENST00000468211 CEP126Q9P2H0 1117 aa30.53■■■□□ 2.48
PTCH1-210ENST00000468211 MAST3O60307 1309 aa30.52■■■□□ 2.48
PTCH1-210ENST00000468211 VGLL4Q14135 290 aa30.52■■■□□ 2.48
PTCH1-210ENST00000468211 HHIPL2Q6UWX4 724 aa30.52■■■□□ 2.48
PTCH1-210ENST00000468211 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.52■■■□□ 2.48
PTCH1-210ENST00000468211 WDR66Q8TBY9 1149 aa30.52■■■□□ 2.48
PTCH1-210ENST00000468211 TESPA1A2RU30 521 aaPredicted RBP30.51■■■□□ 2.47
PTCH1-210ENST00000468211 MAP3K9P80192 1104 aa30.51■■■□□ 2.47
PTCH1-210ENST00000468211 INTS3Q68E01 1043 aaKnown RBP30.51■■■□□ 2.47
PTCH1-210ENST00000468211 TNNQ9UQP3 1299 aa30.51■■■□□ 2.47
PTCH1-210ENST00000468211 PHKA1P46020 1223 aa30.5■■■□□ 2.47
PTCH1-210ENST00000468211 ARHGAP45Q92619 1136 aa30.5■■■□□ 2.47
PTCH1-210ENST00000468211 MS4A4AQ96JQ5 239 aa30.5■■■□□ 2.47
PTCH1-210ENST00000468211 COPRSQ9NQ92 184 aa30.5■■■□□ 2.47
PTCH1-210ENST00000468211 PRDX5P30044 214 aa30.49■■■□□ 2.47
PTCH1-210ENST00000468211 ADORA1P30542 326 aa30.49■■■□□ 2.47
PTCH1-210ENST00000468211 IL15P40933 162 aaPredicted RBP30.49■■■□□ 2.47
PTCH1-210ENST00000468211 CRHR2Q13324 411 aa30.49■■■□□ 2.47
PTCH1-210ENST00000468211 DIXDC1Q155Q3 683 aa30.49■■■□□ 2.47
PTCH1-210ENST00000468211 FKBP1CQ5VVH2 108 aa30.49■■■□□ 2.47
PTCH1-210ENST00000468211 FAM83AQ86UY5 434 aa30.49■■■□□ 2.47
PTCH1-210ENST00000468211 AK9Q5TCS8 1911 aa30.48■■■□□ 2.47
PTCH1-210ENST00000468211 FBXO46Q6PJ61 603 aaPredicted RBP30.48■■■□□ 2.47
PTCH1-210ENST00000468211 TMOD2Q9NZR1 351 aa30.48■■■□□ 2.47
PTCH1-210ENST00000468211 DAGLAQ9Y4D2 1042 aa30.48■■■□□ 2.47
PTCH1-210ENST00000468211 HDAC5Q9UQL6 1122 aa30.47■■■□□ 2.47
PTCH1-210ENST00000468211 MYH2Q9UKX2 1941 aa30.46■■■□□ 2.47
PTCH1-210ENST00000468211 BRI3BPQ8WY22 251 aa30.46■■■□□ 2.47
PTCH1-210ENST00000468211 BCAR3O75815 825 aa30.45■■■□□ 2.47
PTCH1-210ENST00000468211 OTUD5Q96G74 571 aa30.45■■■□□ 2.47
PTCH1-210ENST00000468211 GNL3LQ9NVN8 582 aaKnown RBP30.45■■■□□ 2.47
PTCH1-210ENST00000468211 CSADQ9Y600 493 aa30.45■■■□□ 2.47
PTCH1-210ENST00000468211 SNCAIPQ9Y6H5 919 aa30.45■■■□□ 2.47
PTCH1-210ENST00000468211 HTTP42858 3142 aa30.45■■■□□ 2.46
PTCH1-210ENST00000468211 TRIM27P14373 513 aa30.44■■■□□ 2.46
PTCH1-210ENST00000468211 OTUD7BQ6GQQ9 843 aa30.44■■■□□ 2.46
PTCH1-210ENST00000468211 CDC42EP5Q6NZY7 148 aa30.44■■■□□ 2.46
PTCH1-210ENST00000468211 ZKSCAN4Q969J2 545 aaPredicted RBP30.44■■■□□ 2.46
PTCH1-210ENST00000468211 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.44■■■□□ 2.46
PTCH1-210ENST00000468211 RPAP1Q9BWH6 1393 aaPredicted RBP30.43■■■□□ 2.46
PTCH1-210ENST00000468211 SRGAP3O43295 1099 aa30.43■■■□□ 2.46
PTCH1-210ENST00000468211 GNAI3P08754 354 aa30.43■■■□□ 2.46
PTCH1-210ENST00000468211 TIMM10P62072 90 aa30.43■■■□□ 2.46
PTCH1-210ENST00000468211 CAP1Q01518 475 aa30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms