RNA–Protein interactions for RNA: ENST00000468164.1

C9orf3-212, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-212ENST00000468164 TCP10L2B9ZVM9 353 aa16.75■□□□□ 0.27
C9orf3-212ENST00000468164 TBC1D22AQ8WUA7 517 aa16.75■□□□□ 0.27
C9orf3-212ENST00000468164 SLC10A4Q96EP9 437 aa16.75■□□□□ 0.27
C9orf3-212ENST00000468164 PA2G4Q9UQ80 394 aaKnown RBP16.75■□□□□ 0.27
C9orf3-212ENST00000468164 TBC1D8O95759 1140 aa16.74■□□□□ 0.27
C9orf3-212ENST00000468164 HNRNPUQ00839 825 aaKnown RBP eCLIP16.74■□□□□ 0.27
C9orf3-212ENST00000468164 TNFAIP1Q13829 316 aa16.74■□□□□ 0.27
C9orf3-212ENST00000468164 SPDYE2Q495Y8 402 aa16.74■□□□□ 0.27
C9orf3-212ENST00000468164 DIEXFQ68CQ4 756 aaKnown RBP16.74■□□□□ 0.27
C9orf3-212ENST00000468164 ATG9AQ7Z3C6 839 aa16.74■□□□□ 0.27
C9orf3-212ENST00000468164 LPIN2Q92539 896 aa16.74■□□□□ 0.27
C9orf3-212ENST00000468164 CLMNQ96JQ2 1002 aa16.74■□□□□ 0.27
C9orf3-212ENST00000468164 HDAC5Q9UQL6 1122 aa16.74■□□□□ 0.27
C9orf3-212ENST00000468164 FGFR2P21802 821 aa16.73■□□□□ 0.27
C9orf3-212ENST00000468164 CACNB3P54284 484 aa16.73■□□□□ 0.27
C9orf3-212ENST00000468164 SREBF2Q12772 1141 aa16.73■□□□□ 0.27
C9orf3-212ENST00000468164 ATP2B3Q16720 1220 aa16.73■□□□□ 0.27
C9orf3-212ENST00000468164 LDLRAD1Q5T700 205 aa16.73■□□□□ 0.27
C9orf3-212ENST00000468164 TEKT1Q969V4 418 aa16.73■□□□□ 0.27
C9orf3-212ENST00000468164 CLUAP1Q96AJ1 413 aa16.73■□□□□ 0.27
C9orf3-212ENST00000468164 CEP126Q9P2H0 1117 aa16.73■□□□□ 0.27
C9orf3-212ENST00000468164 TNNQ9UQP3 1299 aa16.73■□□□□ 0.27
C9orf3-212ENST00000468164 BCAR3O75815 825 aa16.72■□□□□ 0.27
C9orf3-212ENST00000468164 IREB2P48200 963 aaKnown RBP16.72■□□□□ 0.27
C9orf3-212ENST00000468164 TNNI2P48788 182 aa16.72■□□□□ 0.27
C9orf3-212ENST00000468164 SPRYD7Q5W111 196 aa16.72■□□□□ 0.27
C9orf3-212ENST00000468164 CDAN1Q8IWY9 1227 aa16.72■□□□□ 0.27
C9orf3-212ENST00000468164 TMEM39BQ9GZU3 492 aa16.72■□□□□ 0.27
C9orf3-212ENST00000468164 IPO8O15397 1037 aaKnown RBP16.71■□□□□ 0.27
C9orf3-212ENST00000468164 TMOD2Q9NZR1 351 aa16.71■□□□□ 0.27
C9orf3-212ENST00000468164 SRGAP3O43295 1099 aa16.7■□□□□ 0.26
C9orf3-212ENST00000468164 USP2O75604 605 aaPredicted RBP16.7■□□□□ 0.26
C9orf3-212ENST00000468164 CIAO1O76071 339 aa16.7■□□□□ 0.26
C9orf3-212ENST00000468164 GNAI3P08754 354 aa16.7■□□□□ 0.26
C9orf3-212ENST00000468164 IL15P40933 162 aaPredicted RBP16.7■□□□□ 0.26
C9orf3-212ENST00000468164 TM4SF4P48230 202 aa16.7■□□□□ 0.26
C9orf3-212ENST00000468164 INTS3Q68E01 1043 aaKnown RBP16.7■□□□□ 0.26
C9orf3-212ENST00000468164 ARHGAP45Q92619 1136 aa16.7■□□□□ 0.26
C9orf3-212ENST00000468164 WNK4Q96J92 1243 aa16.7■□□□□ 0.26
C9orf3-212ENST00000468164 ELP3Q9H9T3 547 aa16.7■□□□□ 0.26
C9orf3-212ENST00000468164 MAST3O60307 1309 aa16.7■□□□□ 0.26
C9orf3-212ENST00000468164 TRIM27P14373 513 aa16.69■□□□□ 0.26
C9orf3-212ENST00000468164 HDLBPQ00341 1268 aaKnown RBP16.69■□□□□ 0.26
C9orf3-212ENST00000468164 MAP3K11Q16584 847 aa16.69■□□□□ 0.26
C9orf3-212ENST00000468164 ANKRD13AQ8IZ07 590 aa16.69■□□□□ 0.26
C9orf3-212ENST00000468164 WDR66Q8TBY9 1149 aa16.69■□□□□ 0.26
C9orf3-212ENST00000468164 GNL3LQ9NVN8 582 aaKnown RBP16.69■□□□□ 0.26
C9orf3-212ENST00000468164 FBXO3Q9UK99 471 aa16.69■□□□□ 0.26
C9orf3-212ENST00000468164 DOCK2Q92608 1830 aa16.68■□□□□ 0.26
C9orf3-212ENST00000468164 MANSC4A6NHS7 340 aaPredicted RBP16.68■□□□□ 0.26
C9orf3-212ENST00000468164 ADORA1P30542 326 aa16.68■□□□□ 0.26
C9orf3-212ENST00000468164 ATF7IPQ6VMQ6 1270 aa16.68■□□□□ 0.26
C9orf3-212ENST00000468164 CTU1Q7Z7A3 348 aaKnown RBP16.68■□□□□ 0.26
C9orf3-212ENST00000468164 ZNF296Q8WUU4 475 aaPredicted RBP16.68■□□□□ 0.26
C9orf3-212ENST00000468164 COPRSQ9NQ92 184 aa16.68■□□□□ 0.26
C9orf3-212ENST00000468164 ZBTB48P10074 688 aaPredicted RBP16.67■□□□□ 0.26
C9orf3-212ENST00000468164 PHKA1P46020 1223 aa16.67■□□□□ 0.26
C9orf3-212ENST00000468164 ZDHHC15Q96MV8 337 aa16.67■□□□□ 0.26
C9orf3-212ENST00000468164 TEPSINQ96N21 525 aa16.67■□□□□ 0.26
C9orf3-212ENST00000468164 GPR25O00155 361 aa16.66■□□□□ 0.26
C9orf3-212ENST00000468164 LDHBP07195 334 aaKnown RBP16.66■□□□□ 0.26
C9orf3-212ENST00000468164 TIMM10P62072 90 aa16.66■□□□□ 0.26
C9orf3-212ENST00000468164 DIXDC1Q155Q3 683 aa16.66■□□□□ 0.26
C9orf3-212ENST00000468164 OPTNQ96CV9 577 aa16.66■□□□□ 0.26
C9orf3-212ENST00000468164 R3HDMLQ9H3Y0 253 aa16.66■□□□□ 0.26
C9orf3-212ENST00000468164 SUGT1Q9Y2Z0 365 aa16.66■□□□□ 0.26
C9orf3-212ENST00000468164 TNRC18O15417 2968 aaPredicted RBP16.66■□□□□ 0.26
C9orf3-212ENST00000468164 MYO5AQ9Y4I1 1855 aaKnown RBP16.65■□□□□ 0.26
C9orf3-212ENST00000468164 GNAI2P04899 355 aa16.65■□□□□ 0.26
C9orf3-212ENST00000468164 PRDX5P30044 214 aa16.65■□□□□ 0.26
C9orf3-212ENST00000468164 GJA5P36382 358 aa16.65■□□□□ 0.26
C9orf3-212ENST00000468164 TFCP2Q12800 502 aa16.65■□□□□ 0.26
C9orf3-212ENST00000468164 ZKSCAN2Q63HK3 967 aa16.65■□□□□ 0.26
C9orf3-212ENST00000468164 APOBEC3HQ6NTF7 200 aaKnown RBP16.65■□□□□ 0.26
C9orf3-212ENST00000468164 HHIPL2Q6UWX4 724 aa16.65■□□□□ 0.26
C9orf3-212ENST00000468164 IFNL1Q8IU54 200 aa16.65■□□□□ 0.26
C9orf3-212ENST00000468164 TMEM57Q8N5G2 664 aa16.65■□□□□ 0.26
C9orf3-212ENST00000468164 CNKSR2Q8WXI2 1034 aa16.65■□□□□ 0.26
C9orf3-212ENST00000468164 NEUROD6Q96NK8 337 aa16.65■□□□□ 0.26
C9orf3-212ENST00000468164 DENND2AQ9ULE3 1009 aa16.65■□□□□ 0.26
C9orf3-212ENST00000468164 CSADQ9Y600 493 aa16.65■□□□□ 0.26
C9orf3-212ENST00000468164 A0A1B0GUL7 405 aa16.64■□□□□ 0.25
C9orf3-212ENST00000468164 UNCXA6NJT0 531 aa16.64■□□□□ 0.25
C9orf3-212ENST00000468164 IGF2BP3O00425 579 aaKnown RBP eCLIP16.64■□□□□ 0.25
C9orf3-212ENST00000468164 ALDH1A1P00352 501 aa16.64■□□□□ 0.25
C9orf3-212ENST00000468164 INHBEP58166 350 aa16.64■□□□□ 0.25
C9orf3-212ENST00000468164 TCP10Q12799 353 aa16.64■□□□□ 0.25
C9orf3-212ENST00000468164 CCDC102BQ68D86 513 aa16.64■□□□□ 0.25
C9orf3-212ENST00000468164 DAGLAQ9Y4D2 1042 aa16.64■□□□□ 0.25
C9orf3-212ENST00000468164 FKTNO75072 461 aa16.63■□□□□ 0.25
C9orf3-212ENST00000468164 MAP3K9P80192 1104 aa16.63■□□□□ 0.25
C9orf3-212ENST00000468164 VGLL4Q14135 290 aa16.63■□□□□ 0.25
C9orf3-212ENST00000468164 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.63■□□□□ 0.25
C9orf3-212ENST00000468164 FTSJ3Q8IY81 847 aaKnown RBP16.63■□□□□ 0.25
C9orf3-212ENST00000468164 OTUD5Q96G74 571 aa16.63■□□□□ 0.25
C9orf3-212ENST00000468164 MRIQ9BWK5 157 aa16.63■□□□□ 0.25
C9orf3-212ENST00000468164 ABCF2Q9UG63 623 aa16.63■□□□□ 0.25
C9orf3-212ENST00000468164 SOX10P56693 466 aa16.62■□□□□ 0.25
C9orf3-212ENST00000468164 MLLT1Q03111 559 aaPredicted RBP16.62■□□□□ 0.25
C9orf3-212ENST00000468164 GORABQ5T7V8 394 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms