RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 RBM5P52756 815 aaKnown RBP eCLIP17.5■□□□□ 0.39
CCHCR1-211ENST00000467553 HDLBPQ00341 1268 aaKnown RBP17.5■□□□□ 0.39
CCHCR1-211ENST00000467553 FBXO33Q7Z6M2 555 aa17.5■□□□□ 0.39
CCHCR1-211ENST00000467553 MRIQ9BWK5 157 aa17.5■□□□□ 0.39
CCHCR1-211ENST00000467553 SIL1Q9H173 461 aa17.5■□□□□ 0.39
CCHCR1-211ENST00000467553 LAMB1P07942 1786 aa17.5■□□□□ 0.39
CCHCR1-211ENST00000467553 EYA2O00167 538 aa17.49■□□□□ 0.39
CCHCR1-211ENST00000467553 PDE8BO95263 885 aa17.49■□□□□ 0.39
CCHCR1-211ENST00000467553 GNAI2P04899 355 aa17.49■□□□□ 0.39
CCHCR1-211ENST00000467553 GYG1P46976 350 aa17.49■□□□□ 0.39
CCHCR1-211ENST00000467553 YTHDC1Q96MU7 727 aaKnown RBP17.49■□□□□ 0.39
CCHCR1-211ENST00000467553 VEZTQ9HBM0 779 aa17.49■□□□□ 0.39
CCHCR1-211ENST00000467553 TTF2Q9UNY4 1162 aaKnown RBP17.49■□□□□ 0.39
CCHCR1-211ENST00000467553 SUGT1Q9Y2Z0 365 aa17.49■□□□□ 0.39
CCHCR1-211ENST00000467553 CLRN2A0PK11 232 aa17.48■□□□□ 0.39
CCHCR1-211ENST00000467553 GPR25O00155 361 aa17.48■□□□□ 0.39
CCHCR1-211ENST00000467553 RLBP1P12271 317 aa17.48■□□□□ 0.39
CCHCR1-211ENST00000467553 TNNI2P48788 182 aa17.48■□□□□ 0.39
CCHCR1-211ENST00000467553 PRKG1Q13976 671 aa17.48■□□□□ 0.39
CCHCR1-211ENST00000467553 SPDYE2Q495Y8 402 aa17.48■□□□□ 0.39
CCHCR1-211ENST00000467553 ITPRIPQ8IWB1 547 aa17.48■□□□□ 0.39
CCHCR1-211ENST00000467553 ANKRD13AQ8IZ07 590 aa17.48■□□□□ 0.39
CCHCR1-211ENST00000467553 ZNF296Q8WUU4 475 aaPredicted RBP17.48■□□□□ 0.39
CCHCR1-211ENST00000467553 RCAN3Q9UKA8 241 aa17.48■□□□□ 0.39
CCHCR1-211ENST00000467553 PA2G4Q9UQ80 394 aaKnown RBP17.48■□□□□ 0.39
CCHCR1-211ENST00000467553 SRGAP3O43295 1099 aa17.47■□□□□ 0.39
CCHCR1-211ENST00000467553 TBC1D8O95759 1140 aa17.47■□□□□ 0.39
CCHCR1-211ENST00000467553 RASA3Q14644 834 aa17.47■□□□□ 0.39
CCHCR1-211ENST00000467553 OTUD7BQ6GQQ9 843 aa17.47■□□□□ 0.39
CCHCR1-211ENST00000467553 VGLL2Q8N8G2 317 aa17.47■□□□□ 0.39
CCHCR1-211ENST00000467553 PANK1Q8TE04 598 aa17.47■□□□□ 0.39
CCHCR1-211ENST00000467553 FBXO3Q9UK99 471 aa17.47■□□□□ 0.39
CCHCR1-211ENST00000467553 MAST3O60307 1309 aa17.47■□□□□ 0.39
CCHCR1-211ENST00000467553 FKTNO75072 461 aa17.46■□□□□ 0.39
CCHCR1-211ENST00000467553 FRAT2O75474 233 aaPredicted RBP17.46■□□□□ 0.39
CCHCR1-211ENST00000467553 IFIT1P09914 478 aaKnown RBP17.46■□□□□ 0.39
CCHCR1-211ENST00000467553 NBPF12Q5TAG4 269 aaPredicted RBP17.46■□□□□ 0.39
CCHCR1-211ENST00000467553 ATG9AQ7Z3C6 839 aa17.46■□□□□ 0.39
CCHCR1-211ENST00000467553 WNK4Q96J92 1243 aa17.46■□□□□ 0.39
CCHCR1-211ENST00000467553 ZNF70Q9UC06 446 aaPredicted RBP17.46■□□□□ 0.39
CCHCR1-211ENST00000467553 USP2O75604 605 aaPredicted RBP17.45■□□□□ 0.38
CCHCR1-211ENST00000467553 CRKP46108 304 aa17.45■□□□□ 0.38
CCHCR1-211ENST00000467553 PUM3Q15397 648 aaKnown RBP17.45■□□□□ 0.38
CCHCR1-211ENST00000467553 CEP126Q9P2H0 1117 aa17.45■□□□□ 0.38
CCHCR1-211ENST00000467553 JAG2Q9Y219 1238 aa17.45■□□□□ 0.38
CCHCR1-211ENST00000467553 PCDHAC2Q9Y5I4 1007 aa17.45■□□□□ 0.38
CCHCR1-211ENST00000467553 SSC5DA1L4H1 1573 aa17.45■□□□□ 0.38
CCHCR1-211ENST00000467553 ZBTB7BO15156 539 aaPredicted RBP17.44■□□□□ 0.38
CCHCR1-211ENST00000467553 MS4A1P11836 297 aa17.44■□□□□ 0.38
CCHCR1-211ENST00000467553 MKRN3Q13064 507 aaKnown RBP17.44■□□□□ 0.38
CCHCR1-211ENST00000467553 FKBP1CQ5VVH2 108 aa17.44■□□□□ 0.38
CCHCR1-211ENST00000467553 IFNL1Q8IU54 200 aa17.44■□□□□ 0.38
CCHCR1-211ENST00000467553 TEKT1Q969V4 418 aa17.44■□□□□ 0.38
CCHCR1-211ENST00000467553 HOOK2Q96ED9 719 aa17.44■□□□□ 0.38
CCHCR1-211ENST00000467553 CIAO1O76071 339 aa17.43■□□□□ 0.38
CCHCR1-211ENST00000467553 FGFR2P21802 821 aa17.43■□□□□ 0.38
CCHCR1-211ENST00000467553 IL15P40933 162 aaPredicted RBP17.43■□□□□ 0.38
CCHCR1-211ENST00000467553 FBXO46Q6PJ61 603 aaPredicted RBP17.43■□□□□ 0.38
CCHCR1-211ENST00000467553 LPIN2Q92539 896 aa17.43■□□□□ 0.38
CCHCR1-211ENST00000467553 TDRD3Q9H7E2 651 aaKnown RBP17.43■□□□□ 0.38
CCHCR1-211ENST00000467553 C1orf115Q9H7X2 142 aa17.43■□□□□ 0.38
CCHCR1-211ENST00000467553 COPRSQ9NQ92 184 aa17.43■□□□□ 0.38
CCHCR1-211ENST00000467553 IQSEC3Q9UPP2 1182 aaPredicted RBP17.43■□□□□ 0.38
CCHCR1-211ENST00000467553 HPS5Q9UPZ3 1129 aa17.43■□□□□ 0.38
CCHCR1-211ENST00000467553 PNMA6EA0A0J9YXQ4 647 aa17.42■□□□□ 0.38
CCHCR1-211ENST00000467553 TESPA1A2RU30 521 aaPredicted RBP17.42■□□□□ 0.38
CCHCR1-211ENST00000467553 ZBTB22O15209 634 aa17.42■□□□□ 0.38
CCHCR1-211ENST00000467553 SLC5A1P13866 664 aa17.42■□□□□ 0.38
CCHCR1-211ENST00000467553 BCAMP50895 628 aa17.42■□□□□ 0.38
CCHCR1-211ENST00000467553 MTX1Q13505 466 aa17.42■□□□□ 0.38
CCHCR1-211ENST00000467553 FAM83AQ86UY5 434 aa17.42■□□□□ 0.38
CCHCR1-211ENST00000467553 WDR66Q8TBY9 1149 aa17.42■□□□□ 0.38
CCHCR1-211ENST00000467553 ZDHHC15Q96MV8 337 aa17.42■□□□□ 0.38
CCHCR1-211ENST00000467553 TMOD2Q9NZR1 351 aa17.42■□□□□ 0.38
CCHCR1-211ENST00000467553 TNRC18O15417 2968 aaPredicted RBP17.41■□□□□ 0.38
CCHCR1-211ENST00000467553 CHAF1AQ13111 956 aaPredicted RBP17.41■□□□□ 0.38
CCHCR1-211ENST00000467553 HHIPL2Q6UWX4 724 aa17.41■□□□□ 0.38
CCHCR1-211ENST00000467553 CLMNQ96JQ2 1002 aa17.41■□□□□ 0.38
CCHCR1-211ENST00000467553 TEPSINQ96N21 525 aa17.41■□□□□ 0.38
CCHCR1-211ENST00000467553 MAP3K9P80192 1104 aa17.4■□□□□ 0.38
CCHCR1-211ENST00000467553 ATP8B2P98198 1209 aa17.4■□□□□ 0.38
CCHCR1-211ENST00000467553 ATP2B3Q16720 1220 aa17.4■□□□□ 0.38
CCHCR1-211ENST00000467553 FZD1Q9UP38 647 aa17.4■□□□□ 0.38
CCHCR1-211ENST00000467553 AOX1Q06278 1338 aa17.4■□□□□ 0.38
CCHCR1-211ENST00000467553 MYH13Q9UKX3 1938 aa17.39■□□□□ 0.37
CCHCR1-211ENST00000467553 TCP10L2B9ZVM9 353 aa17.39■□□□□ 0.37
CCHCR1-211ENST00000467553 G3BP1Q13283 466 aaKnown RBP eCLIP17.39■□□□□ 0.37
CCHCR1-211ENST00000467553 ERO1AQ96HE7 468 aa17.39■□□□□ 0.37
CCHCR1-211ENST00000467553 GNL3LQ9NVN8 582 aaKnown RBP17.39■□□□□ 0.37
CCHCR1-211ENST00000467553 COG6Q9Y2V7 657 aa17.39■□□□□ 0.37
CCHCR1-211ENST00000467553 CSADQ9Y600 493 aa17.39■□□□□ 0.37
CCHCR1-211ENST00000467553 IGF2BP3O00425 579 aaKnown RBP eCLIP17.38■□□□□ 0.37
CCHCR1-211ENST00000467553 TFCP2Q12800 502 aa17.38■□□□□ 0.37
CCHCR1-211ENST00000467553 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.38■□□□□ 0.37
CCHCR1-211ENST00000467553 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.38■□□□□ 0.37
CCHCR1-211ENST00000467553 OPTNQ96CV9 577 aa17.38■□□□□ 0.37
CCHCR1-211ENST00000467553 OTOFQ9HC10 1997 aa17.37■□□□□ 0.37
CCHCR1-211ENST00000467553 SEMA3EO15041 775 aa17.37■□□□□ 0.37
CCHCR1-211ENST00000467553 GTF2A2P52657 109 aa17.37■□□□□ 0.37
CCHCR1-211ENST00000467553 TIMM10P62072 90 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms