RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 NIFKQ9BYG3 293 aaKnown RBP7.92□□□□□ -1.14
PTCD3-207ENST00000467273 NDUFB9Q9Y6M9 179 aa7.92□□□□□ -1.14
PTCD3-207ENST00000467273 ADCY9O60503 1353 aa7.92□□□□□ -1.14
PTCD3-207ENST00000467273 CCDC7Q96M83 1385 aa7.92□□□□□ -1.14
PTCD3-207ENST00000467273 GPR37L1O60883 481 aa7.91□□□□□ -1.14
PTCD3-207ENST00000467273 ALAS2P22557 587 aa7.91□□□□□ -1.14
PTCD3-207ENST00000467273 CDK19Q9BWU1 502 aa7.91□□□□□ -1.14
PTCD3-207ENST00000467273 BTAF1O14981 1849 aa7.9□□□□□ -1.14
PTCD3-207ENST00000467273 USP6P35125 1406 aa7.9□□□□□ -1.14
PTCD3-207ENST00000467273 CPSF1Q10570 1443 aaKnown RBP7.9□□□□□ -1.14
PTCD3-207ENST00000467273 ELOA3CA0A087WX78 387 aaPredicted RBP7.9□□□□□ -1.14
PTCD3-207ENST00000467273 ELOA3DA6NLF2 546 aaPredicted RBP7.9□□□□□ -1.14
PTCD3-207ENST00000467273 POM121CA8CG34 1229 aa7.9□□□□□ -1.14
PTCD3-207ENST00000467273 TATP17735 454 aaPredicted RBP7.9□□□□□ -1.14
PTCD3-207ENST00000467273 HMGB2P26583 209 aaKnown RBP7.9□□□□□ -1.14
PTCD3-207ENST00000467273 TSGA10IPQ3SY00 556 aa7.9□□□□□ -1.14
PTCD3-207ENST00000467273 ELOA3BQ3SY89 546 aa7.9□□□□□ -1.14
PTCD3-207ENST00000467273 WWC1Q8IX03 1113 aa7.9□□□□□ -1.14
PTCD3-207ENST00000467273 ELOA3Q8NG57 546 aa7.9□□□□□ -1.14
PTCD3-207ENST00000467273 CCDC97Q96F63 343 aaPredicted RBP7.9□□□□□ -1.14
PTCD3-207ENST00000467273 YBX3P16989 372 aaKnown RBP eCLIP7.89□□□□□ -1.15
PTCD3-207ENST00000467273 GDF10P55107 478 aa7.89□□□□□ -1.15
PTCD3-207ENST00000467273 IRF5Q13568 498 aa7.89□□□□□ -1.15
PTCD3-207ENST00000467273 ZNF827Q17R98 1081 aa7.89□□□□□ -1.15
PTCD3-207ENST00000467273 KCNH5Q8NCM2 988 aa7.89□□□□□ -1.15
PTCD3-207ENST00000467273 NLGN2Q8NFZ4 835 aa7.89□□□□□ -1.15
PTCD3-207ENST00000467273 PODXL2Q9NZ53 605 aa7.89□□□□□ -1.15
PTCD3-207ENST00000467273 SERPINA10Q9UK55 444 aa7.89□□□□□ -1.15
PTCD3-207ENST00000467273 PPIP5K1Q6PFW1 1433 aa7.88□□□□□ -1.15
PTCD3-207ENST00000467273 FAM157BP0CG42 384 aa7.88□□□□□ -1.15
PTCD3-207ENST00000467273 SLFNL1Q499Z3 407 aa7.88□□□□□ -1.15
PTCD3-207ENST00000467273 MARK1Q9P0L2 795 aa7.88□□□□□ -1.15
PTCD3-207ENST00000467273 QRICH2Q9H0J4 1663 aa7.88□□□□□ -1.15
PTCD3-207ENST00000467273 PNPLA7Q6ZV29 1317 aa7.87□□□□□ -1.15
PTCD3-207ENST00000467273 PIK3C2AO00443 1686 aa7.87□□□□□ -1.15
PTCD3-207ENST00000467273 BTBD11A6QL63 1104 aa7.87□□□□□ -1.15
PTCD3-207ENST00000467273 M0R082 166 aa7.87□□□□□ -1.15
PTCD3-207ENST00000467273 INHAP05111 366 aa7.87□□□□□ -1.15
PTCD3-207ENST00000467273 SCNN1DP51172 638 aa7.87□□□□□ -1.15
PTCD3-207ENST00000467273 BICDL1Q6ZP65 573 aa7.87□□□□□ -1.15
PTCD3-207ENST00000467273 SYT9Q86SS6 491 aa7.87□□□□□ -1.15
PTCD3-207ENST00000467273 ARHGEF25Q86VW2 580 aa7.87□□□□□ -1.15
PTCD3-207ENST00000467273 DNAJC5GQ8N7S2 189 aa7.87□□□□□ -1.15
PTCD3-207ENST00000467273 ZNF417Q8TAU3 575 aa7.87□□□□□ -1.15
PTCD3-207ENST00000467273 NACC1Q96RE7 527 aa7.87□□□□□ -1.15
PTCD3-207ENST00000467273 ZNF587Q96SQ5 575 aaPredicted RBP7.87□□□□□ -1.15
PTCD3-207ENST00000467273 SERTAD1Q9UHV2 236 aa7.87□□□□□ -1.15
PTCD3-207ENST00000467273 CD2APQ9Y5K6 639 aa7.87□□□□□ -1.15
PTCD3-207ENST00000467273 TUBGCP6Q96RT7 1819 aa7.87□□□□□ -1.15
PTCD3-207ENST00000467273 KIAA1210Q9ULL0 1709 aa7.86□□□□□ -1.15
PTCD3-207ENST00000467273 PRELPP51888 382 aa7.86□□□□□ -1.15
PTCD3-207ENST00000467273 TRIM28Q13263 835 aaKnown RBP7.86□□□□□ -1.15
PTCD3-207ENST00000467273 ZIC5Q96T25 663 aa7.86□□□□□ -1.15
PTCD3-207ENST00000467273 TFCP2L1Q9NZI6 479 aa7.86□□□□□ -1.15
PTCD3-207ENST00000467273 RGPD5Q99666 1765 aa7.86□□□□□ -1.15
PTCD3-207ENST00000467273 LY75O60449 1722 aa7.86□□□□□ -1.15
PTCD3-207ENST00000467273 ZBTB7CA1YPR0 619 aa7.85□□□□□ -1.15
PTCD3-207ENST00000467273 TOMM70O94826 608 aa7.85□□□□□ -1.15
PTCD3-207ENST00000467273 SMTNP53814 917 aa7.85□□□□□ -1.15
PTCD3-207ENST00000467273 GRIK4Q16099 956 aa7.85□□□□□ -1.15
PTCD3-207ENST00000467273 GLMNQ92990 594 aa7.85□□□□□ -1.15
PTCD3-207ENST00000467273 CALR3Q96L12 384 aaKnown RBP7.85□□□□□ -1.15
PTCD3-207ENST00000467273 CABP1Q9NZU7 370 aa7.85□□□□□ -1.15
PTCD3-207ENST00000467273 NFAT5O94916 1531 aa7.84□□□□□ -1.15
PTCD3-207ENST00000467273 WDR90Q96KV7 1748 aa7.84□□□□□ -1.15
PTCD3-207ENST00000467273 LRP8Q14114 963 aa7.84□□□□□ -1.15
PTCD3-207ENST00000467273 C8orf86Q6ZUL3 223 aa7.84□□□□□ -1.15
PTCD3-207ENST00000467273 JMYQ8N9B5 988 aa7.84□□□□□ -1.15
PTCD3-207ENST00000467273 DCAF11Q8TEB1 546 aa7.84□□□□□ -1.15
PTCD3-207ENST00000467273 ACSBG1Q96GR2 724 aa7.84□□□□□ -1.15
PTCD3-207ENST00000467273 ZDHHC3Q9NYG2 299 aa7.84□□□□□ -1.15
PTCD3-207ENST00000467273 CICQ96RK0 1608 aaPredicted RBP7.84□□□□□ -1.15
PTCD3-207ENST00000467273 PCNTO95613 3336 aa7.83□□□□□ -1.16
PTCD3-207ENST00000467273 TTC21AQ8NDW8 1320 aa7.83□□□□□ -1.16
PTCD3-207ENST00000467273 IL2RBP14784 551 aa7.83□□□□□ -1.16
PTCD3-207ENST00000467273 SRPK2P78362 688 aaKnown RBP7.83□□□□□ -1.16
PTCD3-207ENST00000467273 VAC14Q08AM6 782 aa7.83□□□□□ -1.16
PTCD3-207ENST00000467273 FLAD1Q8NFF5 587 aa7.83□□□□□ -1.16
PTCD3-207ENST00000467273 ADAMTS19Q8TE59 1207 aa7.83□□□□□ -1.16
PTCD3-207ENST00000467273 PARP3Q9Y6F1 533 aa7.83□□□□□ -1.16
PTCD3-207ENST00000467273 EFSO43281 561 aa7.82□□□□□ -1.16
PTCD3-207ENST00000467273 ALBP02768 609 aa7.82□□□□□ -1.16
PTCD3-207ENST00000467273 EIF4G2P78344 907 aaKnown RBP eCLIP7.82□□□□□ -1.16
PTCD3-207ENST00000467273 LAMC2Q13753 1193 aa7.82□□□□□ -1.16
PTCD3-207ENST00000467273 WASHC4Q2M389 1173 aa7.82□□□□□ -1.16
PTCD3-207ENST00000467273 COL13A1Q5TAT6 717 aaPredicted RBP7.82□□□□□ -1.16
PTCD3-207ENST00000467273 SAMD5Q5TGI4 173 aa7.82□□□□□ -1.16
PTCD3-207ENST00000467273 HDGFL1Q5TGJ6 251 aa7.82□□□□□ -1.16
PTCD3-207ENST00000467273 TNS4Q8IZW8 715 aa7.82□□□□□ -1.16
PTCD3-207ENST00000467273 PHTF2Q8N3S3 785 aa7.82□□□□□ -1.16
PTCD3-207ENST00000467273 ZNF526Q8TF50 670 aaPredicted RBP7.82□□□□□ -1.16
PTCD3-207ENST00000467273 USP3Q9Y6I4 520 aa7.82□□□□□ -1.16
PTCD3-207ENST00000467273 USP54Q70EL1 1684 aa7.82□□□□□ -1.16
PTCD3-207ENST00000467273 KRTAP9-9Q9BYP9 154 aa7.81□□□□□ -1.16
PTCD3-207ENST00000467273 KRTAP9-4Q9BYQ2 154 aa7.81□□□□□ -1.16
PTCD3-207ENST00000467273 FAM208AQ9UK61 1670 aaKnown RBP7.81□□□□□ -1.16
PTCD3-207ENST00000467273 ANKRD36BQ8N2N9 1353 aa7.81□□□□□ -1.16
PTCD3-207ENST00000467273 TTC21BQ7Z4L5 1316 aa7.8□□□□□ -1.16
PTCD3-207ENST00000467273 SIN3BO75182 1162 aa7.8□□□□□ -1.16
PTCD3-207ENST00000467273 FSTL1Q12841 308 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms