RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 ACTL7BQ9Y614 415 aa8.87□□□□□ -0.99
XRN1-206ENST00000467077 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.87□□□□□ -0.99
XRN1-206ENST00000467077 NFICP08651 508 aa8.86□□□□□ -0.99
XRN1-206ENST00000467077 EDN3P14138 238 aa8.86□□□□□ -0.99
XRN1-206ENST00000467077 ATCAYQ86WG3 371 aa8.86□□□□□ -0.99
XRN1-206ENST00000467077 STK32AQ8WU08 396 aa8.86□□□□□ -0.99
XRN1-206ENST00000467077 FAM168AQ92567 244 aa8.86□□□□□ -0.99
XRN1-206ENST00000467077 EDEM1Q92611 657 aa8.86□□□□□ -0.99
XRN1-206ENST00000467077 MISP3Q96FF7 219 aa8.86□□□□□ -0.99
XRN1-206ENST00000467077 ESRRAP11474 423 aaPredicted RBP8.85□□□□□ -0.99
XRN1-206ENST00000467077 DNM1Q05193 864 aaKnown RBP8.85□□□□□ -0.99
XRN1-206ENST00000467077 FAM69CQ0P6D2 419 aa8.85□□□□□ -0.99
XRN1-206ENST00000467077 ATG4DQ86TL0 474 aaPredicted RBP8.85□□□□□ -0.99
XRN1-206ENST00000467077 RC3H2Q9HBD1 1191 aaKnown RBP8.85□□□□□ -0.99
XRN1-206ENST00000467077 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.84□□□□□ -0.99
XRN1-206ENST00000467077 TMEM132AQ24JP5 1023 aa8.84□□□□□ -0.99
XRN1-206ENST00000467077 CARMIL2Q6F5E8 1435 aa8.84□□□□□ -0.99
XRN1-206ENST00000467077 DYMQ7RTS9 669 aa8.84□□□□□ -0.99
XRN1-206ENST00000467077 SEMA6CQ9H3T2 930 aa8.84□□□□□ -0.99
XRN1-206ENST00000467077 AP4E1Q9UPM8 1137 aa8.84□□□□□ -0.99
XRN1-206ENST00000467077 CHRDQ9H2X0 955 aa8.83□□□□□ -1
XRN1-206ENST00000467077 KRTAP4-11Q9BYQ6 195 aa8.82□□□□□ -1
XRN1-206ENST00000467077 BHLHE41Q9C0J9 482 aaPredicted RBP8.82□□□□□ -1
XRN1-206ENST00000467077 ZFYVE1Q9HBF4 777 aa8.82□□□□□ -1
XRN1-206ENST00000467077 RAD18Q9NS91 495 aa8.82□□□□□ -1
XRN1-206ENST00000467077 PHACTR2O75167 634 aa8.81□□□□□ -1
XRN1-206ENST00000467077 KRTAP19-4Q3LI73 84 aa8.81□□□□□ -1
XRN1-206ENST00000467077 CYP27C1Q4G0S4 372 aa8.81□□□□□ -1
XRN1-206ENST00000467077 AKAP4Q5JQC9 854 aa8.81□□□□□ -1
XRN1-206ENST00000467077 TMEM40Q8WWA1 233 aa8.81□□□□□ -1
XRN1-206ENST00000467077 A6NHS1 94 aa8.8□□□□□ -1
XRN1-206ENST00000467077 PDGFAP04085 211 aa8.8□□□□□ -1
XRN1-206ENST00000467077 CYP11A1P05108 521 aa8.8□□□□□ -1
XRN1-206ENST00000467077 ACSS3Q9H6R3 686 aa8.8□□□□□ -1
XRN1-206ENST00000467077 DAGLAQ9Y4D2 1042 aa8.8□□□□□ -1
XRN1-206ENST00000467077 EREGO14944 169 aa8.79□□□□□ -1
XRN1-206ENST00000467077 SPRED2Q7Z698 418 aa8.79□□□□□ -1
XRN1-206ENST00000467077 SNX29Q8TEQ0 813 aa8.79□□□□□ -1
XRN1-206ENST00000467077 GGNBP2Q9H3C7 697 aa8.79□□□□□ -1
XRN1-206ENST00000467077 FAM105AQ9NUU6 356 aa8.79□□□□□ -1
XRN1-206ENST00000467077 FUT4P22083 530 aa8.78□□□□□ -1
XRN1-206ENST00000467077 MAOBP27338 520 aa8.78□□□□□ -1
XRN1-206ENST00000467077 MZF1P28698 734 aaPredicted RBP8.78□□□□□ -1
XRN1-206ENST00000467077 ASPAP45381 313 aa8.78□□□□□ -1
XRN1-206ENST00000467077 OGFOD3Q6PK18 319 aa8.78□□□□□ -1
XRN1-206ENST00000467077 WFDC3Q8IUB2 231 aa8.78□□□□□ -1
XRN1-206ENST00000467077 GLIS3Q8NEA6 775 aa8.78□□□□□ -1
XRN1-206ENST00000467077 CLP1Q92989 425 aaKnown RBP8.78□□□□□ -1
XRN1-206ENST00000467077 BNIP3Q12983 259 aa8.77□□□□□ -1.01
XRN1-206ENST00000467077 POU4F3Q15319 338 aa8.77□□□□□ -1.01
XRN1-206ENST00000467077 NOM1Q5C9Z4 860 aaKnown RBP8.77□□□□□ -1.01
XRN1-206ENST00000467077 NETO1Q8TDF5 533 aa8.77□□□□□ -1.01
XRN1-206ENST00000467077 NRSN2Q9GZP1 204 aa8.77□□□□□ -1.01
XRN1-206ENST00000467077 RNASE1P07998 156 aaKnown RBP8.76□□□□□ -1.01
XRN1-206ENST00000467077 PI4K2BQ8TCG2 481 aa8.76□□□□□ -1.01
XRN1-206ENST00000467077 HELQQ8TDG4 1101 aa8.76□□□□□ -1.01
XRN1-206ENST00000467077 FAM84AQ96KN4 292 aa8.76□□□□□ -1.01
XRN1-206ENST00000467077 CORO1BQ9BR76 489 aa8.76□□□□□ -1.01
XRN1-206ENST00000467077 PCDH1Q08174 1060 aa8.75□□□□□ -1.01
XRN1-206ENST00000467077 TMEM164Q5U3C3 297 aa8.75□□□□□ -1.01
XRN1-206ENST00000467077 DDX54Q8TDD1 881 aaKnown RBP8.75□□□□□ -1.01
XRN1-206ENST00000467077 C1GALT1Q9NS00 363 aa8.75□□□□□ -1.01
XRN1-206ENST00000467077 SEPT3Q9UH03 358 aa8.75□□□□□ -1.01
XRN1-206ENST00000467077 TNFRSF21O75509 655 aa8.74□□□□□ -1.01
XRN1-206ENST00000467077 CD8BP10966 210 aa8.74□□□□□ -1.01
XRN1-206ENST00000467077 PLD6Q8N2A8 252 aaKnown RBP8.74□□□□□ -1.01
XRN1-206ENST00000467077 LRRN4CLQ8ND94 238 aa8.74□□□□□ -1.01
XRN1-206ENST00000467077 BHLHE22Q8NFJ8 381 aaPredicted RBP8.74□□□□□ -1.01
XRN1-206ENST00000467077 TOX2Q96NM4 488 aa8.74□□□□□ -1.01
XRN1-206ENST00000467077 CLEC4MQ9H2X3 399 aaPredicted RBP8.74□□□□□ -1.01
XRN1-206ENST00000467077 LGR6Q9HBX8 967 aa8.74□□□□□ -1.01
XRN1-206ENST00000467077 AMOTL2Q9Y2J4 779 aa8.74□□□□□ -1.01
XRN1-206ENST00000467077 LRRC10BA6NIK2 292 aa8.73□□□□□ -1.01
XRN1-206ENST00000467077 ATP2B4P23634 1241 aa8.73□□□□□ -1.01
XRN1-206ENST00000467077 EHHADHQ08426 723 aa8.73□□□□□ -1.01
XRN1-206ENST00000467077 ARHGAP27Q6ZUM4 889 aa8.73□□□□□ -1.01
XRN1-206ENST00000467077 MBNL3Q9NUK0 354 aaKnown RBP8.73□□□□□ -1.01
XRN1-206ENST00000467077 METTL12A8MUP2 240 aa8.72□□□□□ -1.01
XRN1-206ENST00000467077 DYNC1LI2O43237 492 aaPredicted RBP8.72□□□□□ -1.01
XRN1-206ENST00000467077 CTSBP07858 339 aa8.72□□□□□ -1.01
XRN1-206ENST00000467077 SEZ6L2Q6UXD5 910 aa8.72□□□□□ -1.01
XRN1-206ENST00000467077 LATS2Q9NRM7 1088 aa8.72□□□□□ -1.01
XRN1-206ENST00000467077 ADAMTS6Q9UKP5 1117 aa8.72□□□□□ -1.01
XRN1-206ENST00000467077 VAV3Q9UKW4 847 aa8.72□□□□□ -1.01
XRN1-206ENST00000467077 ATG7O95352 703 aa8.71□□□□□ -1.02
XRN1-206ENST00000467077 EIF1AXP47813 144 aaKnown RBP8.71□□□□□ -1.02
XRN1-206ENST00000467077 PRKCQQ04759 706 aa8.71□□□□□ -1.02
XRN1-206ENST00000467077 PDE3AQ14432 1141 aa8.71□□□□□ -1.02
XRN1-206ENST00000467077 ALKBH2Q6NS38 261 aa8.71□□□□□ -1.02
XRN1-206ENST00000467077 FAM181AQ8N9Y4 354 aa8.71□□□□□ -1.02
XRN1-206ENST00000467077 ZSCAN18Q8TBC5 510 aaPredicted RBP8.71□□□□□ -1.02
XRN1-206ENST00000467077 CCER1Q8TC90 406 aaPredicted RBP8.71□□□□□ -1.02
XRN1-206ENST00000467077 FAM53CQ9NYF3 392 aa8.71□□□□□ -1.02
XRN1-206ENST00000467077 FOXD3Q9UJU5 478 aaPredicted RBP8.71□□□□□ -1.02
XRN1-206ENST00000467077 ZNF777Q9ULD5 760 aaPredicted RBP8.71□□□□□ -1.02
XRN1-206ENST00000467077 A0A096LPE4 126 aa8.7□□□□□ -1.02
XRN1-206ENST00000467077 A0A1W2PPZ6 126 aa8.7□□□□□ -1.02
XRN1-206ENST00000467077 FAM87AP0C7U9 286 aa8.7□□□□□ -1.02
XRN1-206ENST00000467077 MPSTP25325 297 aa8.7□□□□□ -1.02
XRN1-206ENST00000467077 AAMPQ13685 434 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms