RNA–Protein interactions for RNA: ENST00000467049.1

PTPDC1-203, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

TSL 2

Gene PTPDC1, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-203ENST00000467049 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.34□□□□□ -0.59
PTPDC1-203ENST00000467049 DZIP1LQ8IYY4 767 aaKnown RBP11.34□□□□□ -0.59
PTPDC1-203ENST00000467049 BRI3BPQ8WY22 251 aa11.34□□□□□ -0.59
PTPDC1-203ENST00000467049 TDRD3Q9H7E2 651 aaKnown RBP11.34□□□□□ -0.59
PTPDC1-203ENST00000467049 ZFYVE28Q9HCC9 887 aa11.34□□□□□ -0.59
PTPDC1-203ENST00000467049 ZSWIM8A7E2V4 1837 aa11.33□□□□□ -0.6
PTPDC1-203ENST00000467049 CRKP46108 304 aa11.33□□□□□ -0.6
PTPDC1-203ENST00000467049 GTF2A2P52657 109 aa11.33□□□□□ -0.6
PTPDC1-203ENST00000467049 HDLBPQ00341 1268 aaKnown RBP11.33□□□□□ -0.6
PTPDC1-203ENST00000467049 EXOSC9Q06265 439 aaKnown RBP11.33□□□□□ -0.6
PTPDC1-203ENST00000467049 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.33□□□□□ -0.6
PTPDC1-203ENST00000467049 ZNF333Q96JL9 665 aa11.33□□□□□ -0.6
PTPDC1-203ENST00000467049 FAM84BQ96KN1 310 aaPredicted RBP11.33□□□□□ -0.6
PTPDC1-203ENST00000467049 ZCCHC17Q9NP64 241 aaKnown RBP11.33□□□□□ -0.6
PTPDC1-203ENST00000467049 CCL15-CCL14A0A0B4J2E2 113 aa11.32□□□□□ -0.6
PTPDC1-203ENST00000467049 CAP1Q01518 475 aa11.32□□□□□ -0.6
PTPDC1-203ENST00000467049 TAF1CQ15572 869 aaPredicted RBP11.32□□□□□ -0.6
PTPDC1-203ENST00000467049 CCL15Q16663 113 aa11.32□□□□□ -0.6
PTPDC1-203ENST00000467049 TMEM106CQ9BVX2 250 aa11.32□□□□□ -0.6
PTPDC1-203ENST00000467049 C9orf78Q9NZ63 289 aaPredicted RBP11.32□□□□□ -0.6
PTPDC1-203ENST00000467049 CSADQ9Y600 493 aa11.32□□□□□ -0.6
PTPDC1-203ENST00000467049 SPDYE5A6NIY4 337 aa11.32□□□□□ -0.6
PTPDC1-203ENST00000467049 EN2P19622 333 aaPredicted RBP11.32□□□□□ -0.6
PTPDC1-203ENST00000467049 GYG1P46976 350 aa11.32□□□□□ -0.6
PTPDC1-203ENST00000467049 VGLL4Q14135 290 aa11.32□□□□□ -0.6
PTPDC1-203ENST00000467049 TBC1D22AQ8WUA7 517 aa11.32□□□□□ -0.6
PTPDC1-203ENST00000467049 MROH5Q6ZUA9 1318 aa11.31□□□□□ -0.6
PTPDC1-203ENST00000467049 TCP10L2B9ZVM9 353 aa11.31□□□□□ -0.6
PTPDC1-203ENST00000467049 FBXO33Q7Z6M2 555 aa11.31□□□□□ -0.6
PTPDC1-203ENST00000467049 NBPF11Q86T75 865 aa11.31□□□□□ -0.6
PTPDC1-203ENST00000467049 CDAN1Q8IWY9 1227 aa11.31□□□□□ -0.6
PTPDC1-203ENST00000467049 CNKSR2Q8WXI2 1034 aa11.31□□□□□ -0.6
PTPDC1-203ENST00000467049 SRCIN1Q9C0H9 1055 aa11.31□□□□□ -0.6
PTPDC1-203ENST00000467049 TMEM39BQ9GZU3 492 aa11.31□□□□□ -0.6
PTPDC1-203ENST00000467049 RIPOR2Q9Y4F9 1068 aa11.31□□□□□ -0.6
PTPDC1-203ENST00000467049 PTCH2Q9Y6C5 1203 aa11.31□□□□□ -0.6
PTPDC1-203ENST00000467049 RPAP1Q9BWH6 1393 aaPredicted RBP11.31□□□□□ -0.6
PTPDC1-203ENST00000467049 WDHD1O75717 1129 aaPredicted RBP11.3□□□□□ -0.6
PTPDC1-203ENST00000467049 SLC9C1Q4G0N8 1177 aa11.3□□□□□ -0.6
PTPDC1-203ENST00000467049 FKBP1CQ5VVH2 108 aa11.3□□□□□ -0.6
PTPDC1-203ENST00000467049 HOOK2Q96ED9 719 aa11.3□□□□□ -0.6
PTPDC1-203ENST00000467049 MRIQ9BWK5 157 aa11.3□□□□□ -0.6
PTPDC1-203ENST00000467049 UTYO14607 1347 aa11.3□□□□□ -0.6
PTPDC1-203ENST00000467049 AK9Q5TCS8 1911 aa11.3□□□□□ -0.6
PTPDC1-203ENST00000467049 CETPP11597 493 aa11.29□□□□□ -0.6
PTPDC1-203ENST00000467049 PRMT2P55345 433 aa11.29□□□□□ -0.6
PTPDC1-203ENST00000467049 FAM83AQ86UY5 434 aa11.29□□□□□ -0.6
PTPDC1-203ENST00000467049 ERO1BQ86YB8 467 aa11.29□□□□□ -0.6
PTPDC1-203ENST00000467049 FAM43AQ8N2R8 423 aa11.29□□□□□ -0.6
PTPDC1-203ENST00000467049 OTUD5Q96G74 571 aa11.29□□□□□ -0.6
PTPDC1-203ENST00000467049 KAZALD1Q96I82 304 aa11.29□□□□□ -0.6
PTPDC1-203ENST00000467049 SUCLG2Q96I99 432 aa11.29□□□□□ -0.6
PTPDC1-203ENST00000467049 PUS3Q9BZE2 481 aaKnown RBP11.29□□□□□ -0.6
PTPDC1-203ENST00000467049 SNCAIPQ9Y6H5 919 aa11.29□□□□□ -0.6
PTPDC1-203ENST00000467049 MGAMO43451 1857 aa11.29□□□□□ -0.6
PTPDC1-203ENST00000467049 GNRH1P01148 92 aa11.29□□□□□ -0.6
PTPDC1-203ENST00000467049 PPIL2Q13356 520 aa11.29□□□□□ -0.6
PTPDC1-203ENST00000467049 GRIK5Q16478 980 aa11.29□□□□□ -0.6
PTPDC1-203ENST00000467049 RABL6Q3YEC7 729 aaPredicted RBP11.29□□□□□ -0.6
PTPDC1-203ENST00000467049 TEKT1Q969V4 418 aa11.29□□□□□ -0.6
PTPDC1-203ENST00000467049 ZDHHC15Q96MV8 337 aa11.29□□□□□ -0.6
PTPDC1-203ENST00000467049 TMOD2Q9NZR1 351 aa11.29□□□□□ -0.6
PTPDC1-203ENST00000467049 SUGT1Q9Y2Z0 365 aa11.29□□□□□ -0.6
PTPDC1-203ENST00000467049 MAST3O60307 1309 aa11.29□□□□□ -0.6
PTPDC1-203ENST00000467049 KIF16BQ96L93 1317 aa11.29□□□□□ -0.6
PTPDC1-203ENST00000467049 TLR2O60603 784 aa11.28□□□□□ -0.6
PTPDC1-203ENST00000467049 SNAPC2Q13487 334 aa11.28□□□□□ -0.6
PTPDC1-203ENST00000467049 KIF22Q14807 665 aa11.28□□□□□ -0.6
PTPDC1-203ENST00000467049 VPS37DQ86XT2 251 aa11.28□□□□□ -0.6
PTPDC1-203ENST00000467049 BTBD19C9JJ37 291 aa11.27□□□□□ -0.6
PTPDC1-203ENST00000467049 CHAF1AQ13111 956 aaPredicted RBP11.27□□□□□ -0.6
PTPDC1-203ENST00000467049 CAVIN4Q5BKX8 364 aa11.27□□□□□ -0.6
PTPDC1-203ENST00000467049 DCAF15Q66K64 600 aa11.27□□□□□ -0.6
PTPDC1-203ENST00000467049 SLC4A10Q6U841 1118 aa11.27□□□□□ -0.6
PTPDC1-203ENST00000467049 VGLL2Q8N8G2 317 aa11.27□□□□□ -0.6
PTPDC1-203ENST00000467049 MRS2Q9HD23 443 aa11.27□□□□□ -0.6
PTPDC1-203ENST00000467049 DOCK2Q92608 1830 aa11.27□□□□□ -0.61
PTPDC1-203ENST00000467049 FXR1P51114 621 aaKnown RBP eCLIP11.27□□□□□ -0.61
PTPDC1-203ENST00000467049 LACTBP83111 547 aaPredicted RBP11.27□□□□□ -0.61
PTPDC1-203ENST00000467049 SLC4A8Q2Y0W8 1093 aa11.27□□□□□ -0.61
PTPDC1-203ENST00000467049 METTL24Q5JXM2 366 aa11.27□□□□□ -0.61
PTPDC1-203ENST00000467049 WRNIP1Q96S55 665 aa11.27□□□□□ -0.61
PTPDC1-203ENST00000467049 HTTP42858 3142 aa11.26□□□□□ -0.61
PTPDC1-203ENST00000467049 PDE8BO95263 885 aa11.26□□□□□ -0.61
PTPDC1-203ENST00000467049 NBPF7P0C2Y1 421 aaPredicted RBP11.26□□□□□ -0.61
PTPDC1-203ENST00000467049 APOBEC3HQ6NTF7 200 aaKnown RBP11.26□□□□□ -0.61
PTPDC1-203ENST00000467049 HHIPL2Q6UWX4 724 aa11.26□□□□□ -0.61
PTPDC1-203ENST00000467049 ANKRD44Q8N8A2 993 aa11.26□□□□□ -0.61
PTPDC1-203ENST00000467049 ZNF341Q9BYN7 854 aa11.26□□□□□ -0.61
PTPDC1-203ENST00000467049 BICC1Q9H694 974 aaKnown RBP11.26□□□□□ -0.61
PTPDC1-203ENST00000467049 SPINK5Q9NQ38 1064 aaPredicted RBP11.26□□□□□ -0.61
PTPDC1-203ENST00000467049 IQSEC3Q9UPP2 1182 aaPredicted RBP11.26□□□□□ -0.61
PTPDC1-203ENST00000467049 IRF6O14896 467 aa11.25□□□□□ -0.61
PTPDC1-203ENST00000467049 FRAT2O75474 233 aaPredicted RBP11.25□□□□□ -0.61
PTPDC1-203ENST00000467049 CACNB3P54284 484 aa11.25□□□□□ -0.61
PTPDC1-203ENST00000467049 PPATQ06203 517 aa11.25□□□□□ -0.61
PTPDC1-203ENST00000467049 LRRC24Q50LG9 513 aa11.25□□□□□ -0.61
PTPDC1-203ENST00000467049 SALL2Q9Y467 1007 aaPredicted RBP11.25□□□□□ -0.61
PTPDC1-203ENST00000467049 ADGRA2Q96PE1 1338 aa11.25□□□□□ -0.61
PTPDC1-203ENST00000467049 C17orf99Q6UX52 265 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms