RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 TMEM39BQ9GZU3 492 aa25.96■■□□□ 1.75
COL6A1-203ENST00000466285 TCP10L2B9ZVM9 353 aa25.95■■□□□ 1.74
COL6A1-203ENST00000466285 SLFN5Q08AF3 891 aa25.95■■□□□ 1.74
COL6A1-203ENST00000466285 SERPINA10Q9UK55 444 aa25.95■■□□□ 1.74
COL6A1-203ENST00000466285 PTPRCP08575 1304 aa25.94■■□□□ 1.74
COL6A1-203ENST00000466285 RFX5P48382 616 aaPredicted RBP25.94■■□□□ 1.74
COL6A1-203ENST00000466285 BCAMP50895 628 aa25.94■■□□□ 1.74
COL6A1-203ENST00000466285 ELP3Q9H9T3 547 aa25.94■■□□□ 1.74
COL6A1-203ENST00000466285 PPP1R12BO60237 982 aaPredicted RBP25.93■■□□□ 1.74
COL6A1-203ENST00000466285 FKTNO75072 461 aa25.93■■□□□ 1.74
COL6A1-203ENST00000466285 ZBTB48P10074 688 aaPredicted RBP25.93■■□□□ 1.74
COL6A1-203ENST00000466285 NOM1Q5C9Z4 860 aaKnown RBP25.93■■□□□ 1.74
COL6A1-203ENST00000466285 PTPN18Q99952 460 aa25.93■■□□□ 1.74
COL6A1-203ENST00000466285 BRCA2P51587 3418 aa25.92■■□□□ 1.74
COL6A1-203ENST00000466285 MANSC4A6NHS7 340 aaPredicted RBP25.92■■□□□ 1.74
COL6A1-203ENST00000466285 E9PSI1 815 aa25.92■■□□□ 1.74
COL6A1-203ENST00000466285 SUPT20HL1Q3ZLR7 823 aa25.92■■□□□ 1.74
COL6A1-203ENST00000466285 PDE8BO95263 885 aa25.91■■□□□ 1.74
COL6A1-203ENST00000466285 FGFR2P21802 821 aa25.91■■□□□ 1.74
COL6A1-203ENST00000466285 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.91■■□□□ 1.74
COL6A1-203ENST00000466285 IREB2P48200 963 aaKnown RBP25.9■■□□□ 1.74
COL6A1-203ENST00000466285 SLC34A2O95436 690 aa25.89■■□□□ 1.74
COL6A1-203ENST00000466285 CRHR2Q13324 411 aa25.89■■□□□ 1.74
COL6A1-203ENST00000466285 ANKRD13AQ8IZ07 590 aa25.89■■□□□ 1.74
COL6A1-203ENST00000466285 OPTNQ96CV9 577 aa25.89■■□□□ 1.74
COL6A1-203ENST00000466285 MKI67P46013 3256 aaKnown RBP25.89■■□□□ 1.73
COL6A1-203ENST00000466285 VGLL4Q14135 290 aa25.88■■□□□ 1.73
COL6A1-203ENST00000466285 FBXO46Q6PJ61 603 aaPredicted RBP25.88■■□□□ 1.73
COL6A1-203ENST00000466285 VPS37DQ86XT2 251 aa25.88■■□□□ 1.73
COL6A1-203ENST00000466285 PKN2Q16513 984 aaKnown RBP25.87■■□□□ 1.73
COL6A1-203ENST00000466285 ATG9AQ7Z3C6 839 aa25.87■■□□□ 1.73
COL6A1-203ENST00000466285 MS4A4AQ96JQ5 239 aa25.87■■□□□ 1.73
COL6A1-203ENST00000466285 SMC4Q9NTJ3 1288 aa25.87■■□□□ 1.73
COL6A1-203ENST00000466285 RBBP6Q7Z6E9 1792 aaKnown RBP25.87■■□□□ 1.73
COL6A1-203ENST00000466285 TNFAIP1Q13829 316 aa25.86■■□□□ 1.73
COL6A1-203ENST00000466285 OTOP1Q7RTM1 612 aa25.86■■□□□ 1.73
COL6A1-203ENST00000466285 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.86■■□□□ 1.73
COL6A1-203ENST00000466285 CD99L2Q8TCZ2 262 aa25.86■■□□□ 1.73
COL6A1-203ENST00000466285 TESPA1A2RU30 521 aaPredicted RBP25.85■■□□□ 1.73
COL6A1-203ENST00000466285 ALDH1A1P00352 501 aa25.85■■□□□ 1.73
COL6A1-203ENST00000466285 PUM3Q15397 648 aaKnown RBP25.85■■□□□ 1.73
COL6A1-203ENST00000466285 APOBEC3HQ6NTF7 200 aaKnown RBP25.85■■□□□ 1.73
COL6A1-203ENST00000466285 BRI3BPQ8WY22 251 aa25.85■■□□□ 1.73
COL6A1-203ENST00000466285 TRIM17Q9Y577 477 aa25.85■■□□□ 1.73
COL6A1-203ENST00000466285 EYA2O00167 538 aa25.84■■□□□ 1.73
COL6A1-203ENST00000466285 CAVIN4Q5BKX8 364 aa25.84■■□□□ 1.73
COL6A1-203ENST00000466285 TRMT2AQ8IZ69 625 aaKnown RBP25.84■■□□□ 1.73
COL6A1-203ENST00000466285 SIL1Q9H173 461 aa25.84■■□□□ 1.73
COL6A1-203ENST00000466285 UNCXA6NJT0 531 aa25.83■■□□□ 1.73
COL6A1-203ENST00000466285 FRAT2O75474 233 aaPredicted RBP25.83■■□□□ 1.73
COL6A1-203ENST00000466285 TEKT1Q969V4 418 aa25.83■■□□□ 1.73
COL6A1-203ENST00000466285 SNCAIPQ9Y6H5 919 aa25.83■■□□□ 1.73
COL6A1-203ENST00000466285 INHBEP58166 350 aa25.82■■□□□ 1.72
COL6A1-203ENST00000466285 ALDH1L2Q3SY69 923 aa25.82■■□□□ 1.72
COL6A1-203ENST00000466285 TBC1D22AQ8WUA7 517 aa25.82■■□□□ 1.72
COL6A1-203ENST00000466285 ZDHHC15Q96MV8 337 aa25.82■■□□□ 1.72
COL6A1-203ENST00000466285 KIF16BQ96L93 1317 aa25.82■■□□□ 1.72
COL6A1-203ENST00000466285 HDLBPQ00341 1268 aaKnown RBP25.81■■□□□ 1.72
COL6A1-203ENST00000466285 DIXDC1Q155Q3 683 aa25.81■■□□□ 1.72
COL6A1-203ENST00000466285 FAM43AQ8N2R8 423 aa25.81■■□□□ 1.72
COL6A1-203ENST00000466285 OTUD5Q96G74 571 aa25.81■■□□□ 1.72
COL6A1-203ENST00000466285 PA2G4Q9UQ80 394 aaKnown RBP25.81■■□□□ 1.72
COL6A1-203ENST00000466285 DOCK2Q92608 1830 aa25.81■■□□□ 1.72
COL6A1-203ENST00000466285 NOB1Q9ULX3 412 aaKnown RBP25.8■■□□□ 1.72
COL6A1-203ENST00000466285 MYH2Q9UKX2 1941 aa25.79■■□□□ 1.72
COL6A1-203ENST00000466285 POTEFA5A3E0 1075 aa25.79■■□□□ 1.72
COL6A1-203ENST00000466285 IFIT1P09914 478 aaKnown RBP25.79■■□□□ 1.72
COL6A1-203ENST00000466285 ZKSCAN4Q969J2 545 aaPredicted RBP25.79■■□□□ 1.72
COL6A1-203ENST00000466285 LRRFIP2Q9Y608 721 aaKnown RBP25.79■■□□□ 1.72
COL6A1-203ENST00000466285 AK9Q5TCS8 1911 aa25.78■■□□□ 1.72
COL6A1-203ENST00000466285 CCL15-CCL14A0A0B4J2E2 113 aa25.78■■□□□ 1.72
COL6A1-203ENST00000466285 PRDX5P30044 214 aa25.78■■□□□ 1.72
COL6A1-203ENST00000466285 TNNI2P48788 182 aa25.78■■□□□ 1.72
COL6A1-203ENST00000466285 MAP3K9P80192 1104 aa25.78■■□□□ 1.72
COL6A1-203ENST00000466285 CCL15Q16663 113 aa25.78■■□□□ 1.72
COL6A1-203ENST00000466285 MEIS3Q99687 375 aa25.78■■□□□ 1.72
COL6A1-203ENST00000466285 DAGLAQ9Y4D2 1042 aa25.78■■□□□ 1.72
COL6A1-203ENST00000466285 SLC5A1P13866 664 aa25.77■■□□□ 1.72
COL6A1-203ENST00000466285 ADORA1P30542 326 aa25.77■■□□□ 1.72
COL6A1-203ENST00000466285 NFIAQ12857 509 aa25.77■■□□□ 1.72
COL6A1-203ENST00000466285 LPIN2Q92539 896 aa25.77■■□□□ 1.72
COL6A1-203ENST00000466285 WRNIP1Q96S55 665 aa25.77■■□□□ 1.72
COL6A1-203ENST00000466285 TNNQ9UQP3 1299 aa25.77■■□□□ 1.72
COL6A1-203ENST00000466285 RPAP1Q9BWH6 1393 aaPredicted RBP25.77■■□□□ 1.72
COL6A1-203ENST00000466285 SPDYE5A6NIY4 337 aa25.76■■□□□ 1.71
COL6A1-203ENST00000466285 UBTFL1P0CB47 393 aaPredicted RBP25.76■■□□□ 1.71
COL6A1-203ENST00000466285 PHKA1P46020 1223 aa25.76■■□□□ 1.71
COL6A1-203ENST00000466285 ATP2B3Q16720 1220 aa25.76■■□□□ 1.71
COL6A1-203ENST00000466285 PTPN22Q9Y2R2 807 aa25.76■■□□□ 1.71
COL6A1-203ENST00000466285 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.76■■□□□ 1.71
COL6A1-203ENST00000466285 KIAA0100Q14667 2235 aaKnown RBP25.75■■□□□ 1.71
COL6A1-203ENST00000466285 MAST3O60307 1309 aa25.74■■□□□ 1.71
COL6A1-203ENST00000466285 INPP5BP32019 993 aa25.74■■□□□ 1.71
COL6A1-203ENST00000466285 HHIPL2Q6UWX4 724 aa25.74■■□□□ 1.71
COL6A1-203ENST00000466285 MIGA2Q7L4E1 593 aa25.74■■□□□ 1.71
COL6A1-203ENST00000466285 FAM83AQ86UY5 434 aa25.74■■□□□ 1.71
COL6A1-203ENST00000466285 ERO1AQ96HE7 468 aa25.74■■□□□ 1.71
COL6A1-203ENST00000466285 CSADQ9Y600 493 aa25.74■■□□□ 1.71
COL6A1-203ENST00000466285 SP3Q02447 781 aa25.73■■□□□ 1.71
COL6A1-203ENST00000466285 TAF1CQ15572 869 aaPredicted RBP25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms