RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 GNL3LQ9NVN8 582 aaKnown RBP12.58□□□□□ -0.4
CD40-204ENST00000466205 DDX19BQ9UMR2 479 aa12.58□□□□□ -0.4
CD40-204ENST00000466205 EXOC6BQ9Y2D4 811 aa12.58□□□□□ -0.4
CD40-204ENST00000466205 AKAP2Q9Y2D5 859 aa12.58□□□□□ -0.4
CD40-204ENST00000466205 TCP10L2B9ZVM9 353 aa12.57□□□□□ -0.4
CD40-204ENST00000466205 PRDX5P30044 214 aa12.57□□□□□ -0.4
CD40-204ENST00000466205 ECE1P42892 770 aa12.57□□□□□ -0.4
CD40-204ENST00000466205 RASGRF1Q13972 1273 aa12.57□□□□□ -0.4
CD40-204ENST00000466205 PI16Q6UXB8 463 aa12.57□□□□□ -0.4
CD40-204ENST00000466205 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.57□□□□□ -0.4
CD40-204ENST00000466205 MTMR14Q8NCE2 650 aa12.57□□□□□ -0.4
CD40-204ENST00000466205 DEFB129Q9H1M3 183 aa12.57□□□□□ -0.4
CD40-204ENST00000466205 ZNF70Q9UC06 446 aaPredicted RBP12.57□□□□□ -0.4
CD40-204ENST00000466205 SERPINA10Q9UK55 444 aa12.57□□□□□ -0.4
CD40-204ENST00000466205 UBE2Q2LH0YL09 131 aa12.56□□□□□ -0.4
CD40-204ENST00000466205 MMP14P50281 582 aa12.56□□□□□ -0.4
CD40-204ENST00000466205 ZNF157P51786 506 aaPredicted RBP12.56□□□□□ -0.4
CD40-204ENST00000466205 DIXDC1Q155Q3 683 aa12.56□□□□□ -0.4
CD40-204ENST00000466205 TNNI3KQ59H18 835 aa12.56□□□□□ -0.4
CD40-204ENST00000466205 RGMBQ6NW40 437 aa12.56□□□□□ -0.4
CD40-204ENST00000466205 CDAN1Q8IWY9 1227 aa12.56□□□□□ -0.4
CD40-204ENST00000466205 WDR66Q8TBY9 1149 aa12.56□□□□□ -0.4
CD40-204ENST00000466205 TEKT1Q969V4 418 aa12.56□□□□□ -0.4
CD40-204ENST00000466205 ZIC5Q96T25 663 aa12.56□□□□□ -0.4
CD40-204ENST00000466205 CCDC8Q9H0W5 538 aaPredicted RBP12.56□□□□□ -0.4
CD40-204ENST00000466205 ABCF2Q9UG63 623 aa12.56□□□□□ -0.4
CD40-204ENST00000466205 DENND2AQ9ULE3 1009 aa12.56□□□□□ -0.4
CD40-204ENST00000466205 FPGT-TNNI3KV9GXZ4 949 aa12.56□□□□□ -0.4
CD40-204ENST00000466205 LDHBP07195 334 aaKnown RBP12.55□□□□□ -0.4
CD40-204ENST00000466205 NF2P35240 595 aa12.55□□□□□ -0.4
CD40-204ENST00000466205 MKRN3Q13064 507 aaKnown RBP12.55□□□□□ -0.4
CD40-204ENST00000466205 RASA3Q14644 834 aa12.55□□□□□ -0.4
CD40-204ENST00000466205 SPDYE2Q495Y8 402 aa12.55□□□□□ -0.4
CD40-204ENST00000466205 DBNDD2Q9BQY9 259 aa12.55□□□□□ -0.4
CD40-204ENST00000466205 ZBTB40Q9NUA8 1239 aa12.55□□□□□ -0.4
CD40-204ENST00000466205 TLR7Q9NYK1 1049 aaKnown RBP12.55□□□□□ -0.4
CD40-204ENST00000466205 TSKSQ9UJT2 592 aa12.55□□□□□ -0.4
CD40-204ENST00000466205 ECM29Q5VYK3 1845 aa12.55□□□□□ -0.4
CD40-204ENST00000466205 FOXN1O15353 648 aa12.54□□□□□ -0.4
CD40-204ENST00000466205 TTC39AQ5SRH9 613 aa12.54□□□□□ -0.4
CD40-204ENST00000466205 NBPF12Q5TAG4 269 aaPredicted RBP12.54□□□□□ -0.4
CD40-204ENST00000466205 TBC1D9Q6ZT07 1266 aa12.54□□□□□ -0.4
CD40-204ENST00000466205 AIDAQ96BJ3 306 aa12.54□□□□□ -0.4
CD40-204ENST00000466205 IL1RAPL2Q9NP60 686 aa12.54□□□□□ -0.4
CD40-204ENST00000466205 SNRKQ9NRH2 765 aa12.54□□□□□ -0.4
CD40-204ENST00000466205 HMG20BQ9P0W2 317 aa12.54□□□□□ -0.4
CD40-204ENST00000466205 ANGEL1Q9UNK9 670 aaKnown RBP12.54□□□□□ -0.4
CD40-204ENST00000466205 MAST3O60307 1309 aa12.54□□□□□ -0.4
CD40-204ENST00000466205 PAPPA2Q9BXP8 1791 aa12.53□□□□□ -0.4
CD40-204ENST00000466205 SSC5DA1L4H1 1573 aa12.53□□□□□ -0.4
CD40-204ENST00000466205 SEMA3EO15041 775 aa12.53□□□□□ -0.4
CD40-204ENST00000466205 MCAMP43121 646 aa12.53□□□□□ -0.4
CD40-204ENST00000466205 PDE3AQ14432 1141 aa12.53□□□□□ -0.4
CD40-204ENST00000466205 APOBEC3HQ6NTF7 200 aaKnown RBP12.53□□□□□ -0.4
CD40-204ENST00000466205 DZIP1Q86YF9 867 aaKnown RBP12.53□□□□□ -0.4
CD40-204ENST00000466205 SIRT2Q8IXJ6 389 aa12.53□□□□□ -0.4
CD40-204ENST00000466205 HHIPL1Q96JK4 782 aa12.53□□□□□ -0.4
CD40-204ENST00000466205 TMEM39BQ9GZU3 492 aa12.53□□□□□ -0.4
CD40-204ENST00000466205 NOP58Q9Y2X3 529 aaKnown RBP12.53□□□□□ -0.4
CD40-204ENST00000466205 DAGLAQ9Y4D2 1042 aa12.53□□□□□ -0.4
CD40-204ENST00000466205 THSD7BQ9C0I4 1608 aa12.52□□□□□ -0.4
CD40-204ENST00000466205 FAM155AB1AL88 458 aaPredicted RBP12.52□□□□□ -0.41
CD40-204ENST00000466205 RRP1P56182 461 aaKnown RBP12.52□□□□□ -0.41
CD40-204ENST00000466205 RASAL3Q86YV0 1011 aa12.52□□□□□ -0.41
CD40-204ENST00000466205 SPATA5Q8NB90 893 aa12.52□□□□□ -0.41
CD40-204ENST00000466205 EAF2Q96CJ1 260 aaPredicted RBP12.52□□□□□ -0.41
CD40-204ENST00000466205 ZDHHC15Q96MV8 337 aa12.52□□□□□ -0.41
CD40-204ENST00000466205 WBP1LQ9NX94 342 aa12.52□□□□□ -0.41
CD40-204ENST00000466205 DBNLQ9UJU6 430 aaKnown RBP12.52□□□□□ -0.41
CD40-204ENST00000466205 SUGT1Q9Y2Z0 365 aa12.52□□□□□ -0.41
CD40-204ENST00000466205 PCNTO95613 3336 aa12.52□□□□□ -0.41
CD40-204ENST00000466205 SLC10A3P09131 477 aa12.51□□□□□ -0.41
CD40-204ENST00000466205 ARID4AP29374 1257 aaPredicted RBP12.51□□□□□ -0.41
CD40-204ENST00000466205 TNNI2P48788 182 aa12.51□□□□□ -0.41
CD40-204ENST00000466205 FKBP1BP68106 108 aa12.51□□□□□ -0.41
CD40-204ENST00000466205 HDLBPQ00341 1268 aaKnown RBP12.51□□□□□ -0.41
CD40-204ENST00000466205 KIF23Q02241 960 aaPredicted RBP12.51□□□□□ -0.41
CD40-204ENST00000466205 MAP2K1Q02750 393 aaPredicted RBP12.51□□□□□ -0.41
CD40-204ENST00000466205 TCP10Q12799 353 aa12.51□□□□□ -0.41
CD40-204ENST00000466205 TNFAIP1Q13829 316 aa12.51□□□□□ -0.41
CD40-204ENST00000466205 CCDC158Q5M9N0 1113 aa12.51□□□□□ -0.41
CD40-204ENST00000466205 COL13A1Q5TAT6 717 aaPredicted RBP12.51□□□□□ -0.41
CD40-204ENST00000466205 HHIPL2Q6UWX4 724 aa12.51□□□□□ -0.41
CD40-204ENST00000466205 ERICH6Q7L0X2 663 aa12.51□□□□□ -0.41
CD40-204ENST00000466205 ARMC9Q7Z3E5 817 aa12.51□□□□□ -0.41
CD40-204ENST00000466205 AACSQ86V21 672 aa12.51□□□□□ -0.41
CD40-204ENST00000466205 RPAP2Q8IXW5 612 aaPredicted RBP12.51□□□□□ -0.41
CD40-204ENST00000466205 ZGPATQ8N5A5 531 aaKnown RBP12.51□□□□□ -0.41
CD40-204ENST00000466205 RHPN1Q8TCX5 695 aa12.51□□□□□ -0.41
CD40-204ENST00000466205 GPR108Q9NPR9 543 aa12.51□□□□□ -0.41
CD40-204ENST00000466205 TMOD2Q9NZR1 351 aa12.51□□□□□ -0.41
CD40-204ENST00000466205 RAI14Q9P0K7 980 aa12.51□□□□□ -0.41
CD40-204ENST00000466205 PPP2R3BQ9Y5P8 575 aa12.51□□□□□ -0.41
CD40-204ENST00000466205 NDUFB9Q9Y6M9 179 aa12.51□□□□□ -0.41
CD40-204ENST00000466205 SALL1Q9NSC2 1324 aa12.51□□□□□ -0.41
CD40-204ENST00000466205 HMMRO75330 724 aa12.5□□□□□ -0.41
CD40-204ENST00000466205 UQCRFS1P1P0C7P4 283 aa12.5□□□□□ -0.41
CD40-204ENST00000466205 MAP2K2P36507 400 aa12.5□□□□□ -0.41
CD40-204ENST00000466205 LBX1P52954 281 aa12.5□□□□□ -0.41
CD40-204ENST00000466205 MECOMQ03112 1051 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms