RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 SRPK2P78362 688 aaKnown RBP8.18□□□□□ -1.1
LRCH3-211ENST00000466054 BCL7CQ8WUZ0 217 aaPredicted RBP8.18□□□□□ -1.1
LRCH3-211ENST00000466054 FAM168AQ92567 244 aa8.18□□□□□ -1.1
LRCH3-211ENST00000466054 SOX17Q9H6I2 414 aaPredicted RBP8.18□□□□□ -1.1
LRCH3-211ENST00000466054 DLGAP3O95886 979 aa8.17□□□□□ -1.1
LRCH3-211ENST00000466054 C8orf34Q49A92 452 aa8.17□□□□□ -1.1
LRCH3-211ENST00000466054 ZNF574Q6ZN55 896 aaPredicted RBP8.17□□□□□ -1.1
LRCH3-211ENST00000466054 CAPN12Q6ZSI9 719 aa8.17□□□□□ -1.1
LRCH3-211ENST00000466054 VN1R5Q7Z5H4 357 aa8.17□□□□□ -1.1
LRCH3-211ENST00000466054 RC3H2Q9HBD1 1191 aaKnown RBP8.17□□□□□ -1.1
LRCH3-211ENST00000466054 CXXC1Q9P0U4 656 aaPredicted RBP8.17□□□□□ -1.1
LRCH3-211ENST00000466054 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.17□□□□□ -1.1
LRCH3-211ENST00000466054 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.17□□□□□ -1.1
LRCH3-211ENST00000466054 ADH5P11766 374 aa8.16□□□□□ -1.1
LRCH3-211ENST00000466054 HP1BP3Q5SSJ5 553 aaPredicted RBP8.16□□□□□ -1.1
LRCH3-211ENST00000466054 DYMQ7RTS9 669 aa8.16□□□□□ -1.1
LRCH3-211ENST00000466054 ATG4DQ86TL0 474 aaPredicted RBP8.16□□□□□ -1.1
LRCH3-211ENST00000466054 NXPE3Q969Y0 559 aa8.16□□□□□ -1.1
LRCH3-211ENST00000466054 RAD18Q9NS91 495 aa8.16□□□□□ -1.1
LRCH3-211ENST00000466054 CARMIL2Q6F5E8 1435 aa8.15□□□□□ -1.1
LRCH3-211ENST00000466054 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.15□□□□□ -1.1
LRCH3-211ENST00000466054 DNM1Q05193 864 aaKnown RBP8.15□□□□□ -1.1
LRCH3-211ENST00000466054 ZKSCAN3Q9BRR0 538 aa8.15□□□□□ -1.1
LRCH3-211ENST00000466054 ACTL7BQ9Y614 415 aa8.15□□□□□ -1.1
LRCH3-211ENST00000466054 ATG7O95352 703 aa8.14□□□□□ -1.11
LRCH3-211ENST00000466054 EDN3P14138 238 aa8.14□□□□□ -1.11
LRCH3-211ENST00000466054 ATCAYQ86WG3 371 aa8.14□□□□□ -1.11
LRCH3-211ENST00000466054 TMEM40Q8WWA1 233 aa8.14□□□□□ -1.11
LRCH3-211ENST00000466054 EDEM1Q92611 657 aa8.14□□□□□ -1.11
LRCH3-211ENST00000466054 GATA6Q92908 595 aa8.14□□□□□ -1.11
LRCH3-211ENST00000466054 MISP3Q96FF7 219 aa8.14□□□□□ -1.11
LRCH3-211ENST00000466054 ESRRAP11474 423 aaPredicted RBP8.13□□□□□ -1.11
LRCH3-211ENST00000466054 AKAP4Q5JQC9 854 aa8.13□□□□□ -1.11
LRCH3-211ENST00000466054 XKR5Q6UX68 686 aa8.13□□□□□ -1.11
LRCH3-211ENST00000466054 KRTAP4-11Q9BYQ6 195 aa8.13□□□□□ -1.11
LRCH3-211ENST00000466054 SEMA6CQ9H3T2 930 aa8.13□□□□□ -1.11
LRCH3-211ENST00000466054 AP4E1Q9UPM8 1137 aa8.13□□□□□ -1.11
LRCH3-211ENST00000466054 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.12□□□□□ -1.11
LRCH3-211ENST00000466054 ELOAQ14241 798 aaKnown RBP8.12□□□□□ -1.11
LRCH3-211ENST00000466054 CYP27C1Q4G0S4 372 aa8.12□□□□□ -1.11
LRCH3-211ENST00000466054 SPRED2Q7Z698 418 aa8.12□□□□□ -1.11
LRCH3-211ENST00000466054 HOMEZQ8IX15 550 aa8.12□□□□□ -1.11
LRCH3-211ENST00000466054 ZFYVE1Q9HBF4 777 aa8.12□□□□□ -1.11
LRCH3-211ENST00000466054 DAGLAQ9Y4D2 1042 aa8.12□□□□□ -1.11
LRCH3-211ENST00000466054 ASPAP45381 313 aa8.11□□□□□ -1.11
LRCH3-211ENST00000466054 BNIP3Q12983 259 aa8.11□□□□□ -1.11
LRCH3-211ENST00000466054 KRTAP19-4Q3LI73 84 aa8.11□□□□□ -1.11
LRCH3-211ENST00000466054 PI4K2BQ8TCG2 481 aa8.11□□□□□ -1.11
LRCH3-211ENST00000466054 STK32AQ8WU08 396 aa8.11□□□□□ -1.11
LRCH3-211ENST00000466054 PHACTR2O75167 634 aa8.1□□□□□ -1.11
LRCH3-211ENST00000466054 CYP11A1P05108 521 aa8.1□□□□□ -1.11
LRCH3-211ENST00000466054 OGFOD3Q6PK18 319 aa8.1□□□□□ -1.11
LRCH3-211ENST00000466054 LGR6Q9HBX8 967 aa8.1□□□□□ -1.11
LRCH3-211ENST00000466054 ZMIZ1Q9ULJ6 1067 aa8.1□□□□□ -1.11
LRCH3-211ENST00000466054 A6NHS1 94 aa8.09□□□□□ -1.11
LRCH3-211ENST00000466054 FUT4P22083 530 aa8.09□□□□□ -1.11
LRCH3-211ENST00000466054 MAOBP27338 520 aa8.09□□□□□ -1.11
LRCH3-211ENST00000466054 PDE4CQ08493 712 aa8.09□□□□□ -1.11
LRCH3-211ENST00000466054 ARHGAP27Q6ZUM4 889 aa8.09□□□□□ -1.11
LRCH3-211ENST00000466054 FAM84AQ96KN4 292 aa8.09□□□□□ -1.11
LRCH3-211ENST00000466054 TOX2Q96NM4 488 aa8.09□□□□□ -1.11
LRCH3-211ENST00000466054 CHRDQ9H2X0 955 aa8.09□□□□□ -1.11
LRCH3-211ENST00000466054 FAM105AQ9NUU6 356 aa8.09□□□□□ -1.11
LRCH3-211ENST00000466054 LRRC10BA6NIK2 292 aa8.08□□□□□ -1.12
LRCH3-211ENST00000466054 POU4F3Q15319 338 aa8.08□□□□□ -1.12
LRCH3-211ENST00000466054 GLIS3Q8NEA6 775 aa8.08□□□□□ -1.12
LRCH3-211ENST00000466054 BHLHE41Q9C0J9 482 aaPredicted RBP8.08□□□□□ -1.12
LRCH3-211ENST00000466054 GGNBP2Q9H3C7 697 aa8.08□□□□□ -1.12
LRCH3-211ENST00000466054 ACSS3Q9H6R3 686 aa8.08□□□□□ -1.12
LRCH3-211ENST00000466054 EREGO14944 169 aa8.07□□□□□ -1.12
LRCH3-211ENST00000466054 PDGFAP04085 211 aa8.07□□□□□ -1.12
LRCH3-211ENST00000466054 RNASE1P07998 156 aaKnown RBP8.07□□□□□ -1.12
LRCH3-211ENST00000466054 FAM69CQ0P6D2 419 aa8.07□□□□□ -1.12
LRCH3-211ENST00000466054 ZSCAN18Q8TBC5 510 aaPredicted RBP8.07□□□□□ -1.12
LRCH3-211ENST00000466054 CCER1Q8TC90 406 aaPredicted RBP8.07□□□□□ -1.12
LRCH3-211ENST00000466054 DDX54Q8TDD1 881 aaKnown RBP8.07□□□□□ -1.12
LRCH3-211ENST00000466054 NETO1Q8TDF5 533 aa8.07□□□□□ -1.12
LRCH3-211ENST00000466054 CORO1BQ9BR76 489 aa8.07□□□□□ -1.12
LRCH3-211ENST00000466054 USTQ9Y2C2 406 aa8.07□□□□□ -1.12
LRCH3-211ENST00000466054 ZNF865P0CJ78 1059 aaPredicted RBP8.06□□□□□ -1.12
LRCH3-211ENST00000466054 CD8BP10966 210 aa8.06□□□□□ -1.12
LRCH3-211ENST00000466054 RAP1GAPP47736 663 aa8.06□□□□□ -1.12
LRCH3-211ENST00000466054 NOM1Q5C9Z4 860 aaKnown RBP8.06□□□□□ -1.12
LRCH3-211ENST00000466054 MBNL3Q9NUK0 354 aaKnown RBP8.06□□□□□ -1.12
LRCH3-211ENST00000466054 MZF1P28698 734 aaPredicted RBP8.05□□□□□ -1.12
LRCH3-211ENST00000466054 AAMPQ13685 434 aa8.05□□□□□ -1.12
LRCH3-211ENST00000466054 PLD6Q8N2A8 252 aaKnown RBP8.05□□□□□ -1.12
LRCH3-211ENST00000466054 LRRN4CLQ8ND94 238 aa8.05□□□□□ -1.12
LRCH3-211ENST00000466054 SNX29Q8TEQ0 813 aa8.05□□□□□ -1.12
LRCH3-211ENST00000466054 KRTAP4-5Q9BYR2 181 aa8.05□□□□□ -1.12
LRCH3-211ENST00000466054 C1GALT1Q9NS00 363 aa8.05□□□□□ -1.12
LRCH3-211ENST00000466054 PCDH1Q08174 1060 aa8.04□□□□□ -1.12
LRCH3-211ENST00000466054 FAM181AQ8N9Y4 354 aa8.04□□□□□ -1.12
LRCH3-211ENST00000466054 RETREG2Q8NC44 543 aa8.04□□□□□ -1.12
LRCH3-211ENST00000466054 BHLHE22Q8NFJ8 381 aaPredicted RBP8.04□□□□□ -1.12
LRCH3-211ENST00000466054 FAM53CQ9NYF3 392 aa8.04□□□□□ -1.12
LRCH3-211ENST00000466054 SEPT3Q9UH03 358 aa8.04□□□□□ -1.12
LRCH3-211ENST00000466054 VAV3Q9UKW4 847 aa8.04□□□□□ -1.12
LRCH3-211ENST00000466054 METTL12A8MUP2 240 aa8.03□□□□□ -1.12
LRCH3-211ENST00000466054 DYNC1LI2O43237 492 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms