RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 PRDX5P30044 214 aa15.17■□□□□ 0.02
CHPF2-202ENST00000465601 CRKP46108 304 aa15.17■□□□□ 0.02
CHPF2-202ENST00000465601 DLK2Q6UY11 383 aa15.17■□□□□ 0.02
CHPF2-202ENST00000465601 TBC1D9Q6ZT07 1266 aa15.17■□□□□ 0.02
CHPF2-202ENST00000465601 CDC37L1Q7L3B6 337 aa15.17■□□□□ 0.02
CHPF2-202ENST00000465601 KRT26Q7Z3Y9 468 aa15.17■□□□□ 0.02
CHPF2-202ENST00000465601 MTMR14Q8NCE2 650 aa15.17■□□□□ 0.02
CHPF2-202ENST00000465601 ABCF2Q9UG63 623 aa15.17■□□□□ 0.02
CHPF2-202ENST00000465601 SCAF8Q9UPN6 1271 aaKnown RBP15.17■□□□□ 0.02
CHPF2-202ENST00000465601 MYH2Q9UKX2 1941 aa15.17■□□□□ 0.02
CHPF2-202ENST00000465601 PDS5AQ29RF7 1337 aaKnown RBP15.17■□□□□ 0.02
CHPF2-202ENST00000465601 PASKQ96RG2 1323 aa15.17■□□□□ 0.02
CHPF2-202ENST00000465601 SALL1Q9NSC2 1324 aa15.17■□□□□ 0.02
CHPF2-202ENST00000465601 TRPM7Q96QT4 1865 aa15.16■□□□□ 0.02
CHPF2-202ENST00000465601 MYO5AQ9Y4I1 1855 aaKnown RBP15.16■□□□□ 0.02
CHPF2-202ENST00000465601 SPDYE2BA6NHP3 402 aa15.16■□□□□ 0.02
CHPF2-202ENST00000465601 SPDYE6P0CI01 402 aa15.16■□□□□ 0.02
CHPF2-202ENST00000465601 HDAC1Q13547 482 aaPredicted RBP15.16■□□□□ 0.02
CHPF2-202ENST00000465601 ZGPATQ8N5A5 531 aaKnown RBP15.16■□□□□ 0.02
CHPF2-202ENST00000465601 ZNF512BQ96KM6 892 aaPredicted RBP15.16■□□□□ 0.02
CHPF2-202ENST00000465601 SERPINA10Q9UK55 444 aa15.16■□□□□ 0.02
CHPF2-202ENST00000465601 AOX1Q06278 1338 aa15.16■□□□□ 0.02
CHPF2-202ENST00000465601 ADM5C9JUS6 153 aa15.15■□□□□ 0.02
CHPF2-202ENST00000465601 APLP1P51693 650 aa15.15■□□□□ 0.02
CHPF2-202ENST00000465601 HDLBPQ00341 1268 aaKnown RBP15.15■□□□□ 0.02
CHPF2-202ENST00000465601 SULF1Q8IWU6 871 aa15.15■□□□□ 0.02
CHPF2-202ENST00000465601 TEKT1Q969V4 418 aa15.15■□□□□ 0.02
CHPF2-202ENST00000465601 MRIQ9BWK5 157 aa15.15■□□□□ 0.02
CHPF2-202ENST00000465601 RWDD1Q9H446 243 aaPredicted RBP15.15■□□□□ 0.02
CHPF2-202ENST00000465601 CEP350Q5VT06 3117 aa15.15■□□□□ 0.02
CHPF2-202ENST00000465601 MAST3O60307 1309 aa15.15■□□□□ 0.02
CHPF2-202ENST00000465601 CLRN2A0PK11 232 aa15.14■□□□□ 0.01
CHPF2-202ENST00000465601 IGHDP01880 384 aa15.14■□□□□ 0.01
CHPF2-202ENST00000465601 ZAP70P43403 619 aa15.14■□□□□ 0.01
CHPF2-202ENST00000465601 HTRA3P83110 453 aa15.14■□□□□ 0.01
CHPF2-202ENST00000465601 DIXDC1Q155Q3 683 aa15.14■□□□□ 0.01
CHPF2-202ENST00000465601 SPTY2D1Q68D10 685 aaPredicted RBP15.14■□□□□ 0.01
CHPF2-202ENST00000465601 ERICH6Q7L0X2 663 aa15.14■□□□□ 0.01
CHPF2-202ENST00000465601 TDRD3Q9H7E2 651 aaKnown RBP15.14■□□□□ 0.01
CHPF2-202ENST00000465601 NDUFB9Q9Y6M9 179 aa15.14■□□□□ 0.01
CHPF2-202ENST00000465601 ECM29Q5VYK3 1845 aa15.14■□□□□ 0.01
CHPF2-202ENST00000465601 PITPNM2Q9BZ72 1349 aa15.14■□□□□ 0.01
CHPF2-202ENST00000465601 MYO1BO43795 1136 aa15.13■□□□□ 0.01
CHPF2-202ENST00000465601 CYP2E1P05181 493 aaPredicted RBP15.13■□□□□ 0.01
CHPF2-202ENST00000465601 HHIPL2Q6UWX4 724 aa15.13■□□□□ 0.01
CHPF2-202ENST00000465601 DZIP1Q86YF9 867 aaKnown RBP15.13■□□□□ 0.01
CHPF2-202ENST00000465601 ZDHHC15Q96MV8 337 aa15.13■□□□□ 0.01
CHPF2-202ENST00000465601 LRP2BPQ9P2M1 347 aa15.13■□□□□ 0.01
CHPF2-202ENST00000465601 ANKRD45Q5TZF3 282 aa15.12■□□□□ 0.01
CHPF2-202ENST00000465601 PRAMEF18Q5VWM3 479 aa15.12■□□□□ 0.01
CHPF2-202ENST00000465601 APOBEC3HQ6NTF7 200 aaKnown RBP15.12■□□□□ 0.01
CHPF2-202ENST00000465601 GCC1Q96CN9 775 aa15.12■□□□□ 0.01
CHPF2-202ENST00000465601 ZNF408Q9H9D4 720 aa15.12■□□□□ 0.01
CHPF2-202ENST00000465601 VEZTQ9HBM0 779 aa15.12■□□□□ 0.01
CHPF2-202ENST00000465601 RAI14Q9P0K7 980 aa15.12■□□□□ 0.01
CHPF2-202ENST00000465601 ZNF70Q9UC06 446 aaPredicted RBP15.12■□□□□ 0.01
CHPF2-202ENST00000465601 DAGLAQ9Y4D2 1042 aa15.12■□□□□ 0.01
CHPF2-202ENST00000465601 TMEM88BA6NKF7 163 aa15.11■□□□□ 0.01
CHPF2-202ENST00000465601 CELF2O95319 508 aaKnown RBP15.11■□□□□ 0.01
CHPF2-202ENST00000465601 MECOMQ03112 1051 aa15.11■□□□□ 0.01
CHPF2-202ENST00000465601 SPDYE2Q495Y8 402 aa15.11■□□□□ 0.01
CHPF2-202ENST00000465601 CST9Q5W186 159 aa15.11■□□□□ 0.01
CHPF2-202ENST00000465601 APOBEC3FQ8IUX4 373 aaKnown RBP15.11■□□□□ 0.01
CHPF2-202ENST00000465601 BOLA2Q9H3K6 86 aa15.11■□□□□ 0.01
CHPF2-202ENST00000465601 PIH1D3Q9NQM4 214 aaKnown RBP15.11■□□□□ 0.01
CHPF2-202ENST00000465601 ATP5JP18859 108 aa15.1■□□□□ 0.01
CHPF2-202ENST00000465601 B4GALNT3Q6L9W6 998 aa15.1■□□□□ 0.01
CHPF2-202ENST00000465601 ZNF384Q8TF68 577 aa15.1■□□□□ 0.01
CHPF2-202ENST00000465601 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.1■□□□□ 0.01
CHPF2-202ENST00000465601 NSUN4Q96CB9 384 aaKnown RBP15.1■□□□□ 0.01
CHPF2-202ENST00000465601 CDCA5Q96FF9 252 aa15.1■□□□□ 0.01
CHPF2-202ENST00000465601 DNAJC2Q99543 621 aaKnown RBP15.1■□□□□ 0.01
CHPF2-202ENST00000465601 ANTXR1Q9H6X2 564 aa15.1■□□□□ 0.01
CHPF2-202ENST00000465601 ZBTB47Q9UFB7 747 aaPredicted RBP15.1■□□□□ 0.01
CHPF2-202ENST00000465601 AK9Q5TCS8 1911 aa15.09■□□□□ 0.01
CHPF2-202ENST00000465601 TCP10L2B9ZVM9 353 aa15.09■□□□□ 0.01
CHPF2-202ENST00000465601 CACNB3P54284 484 aa15.09■□□□□ 0.01
CHPF2-202ENST00000465601 SLF2Q8IX21 1173 aa15.09■□□□□ 0.01
CHPF2-202ENST00000465601 SMC5Q8IY18 1101 aa15.09■□□□□ 0.01
CHPF2-202ENST00000465601 OTUD7AQ8TE49 926 aaPredicted RBP15.09■□□□□ 0.01
CHPF2-202ENST00000465601 DEFB129Q9H1M3 183 aa15.09■□□□□ 0.01
CHPF2-202ENST00000465601 CREBZFQ9NS37 354 aa15.09■□□□□ 0.01
CHPF2-202ENST00000465601 IDH1O75874 414 aaKnown RBP15.08■□□□□ 0
CHPF2-202ENST00000465601 CENPBP07199 599 aaPredicted RBP15.08■□□□□ 0
CHPF2-202ENST00000465601 LDHCP07864 332 aa15.08■□□□□ 0
CHPF2-202ENST00000465601 GSTO1P78417 241 aa15.08■□□□□ 0
CHPF2-202ENST00000465601 TSHZ3Q63HK5 1081 aa15.08■□□□□ 0
CHPF2-202ENST00000465601 CDC42EP5Q6NZY7 148 aa15.08■□□□□ 0
CHPF2-202ENST00000465601 EDC3Q96F86 508 aaKnown RBP15.08■□□□□ 0
CHPF2-202ENST00000465601 FAM163AQ96GL9 167 aaPredicted RBP15.08■□□□□ 0
CHPF2-202ENST00000465601 ECHDC1Q9NTX5 307 aa15.08■□□□□ 0
CHPF2-202ENST00000465601 USP40Q9NVE5 1235 aa15.08■□□□□ 0
CHPF2-202ENST00000465601 GAKO14976 1311 aa15.08■□□□□ 0
CHPF2-202ENST00000465601 GOLIM4O00461 696 aa15.07■□□□□ 0
CHPF2-202ENST00000465601 RASA3Q14644 834 aa15.07■□□□□ 0
CHPF2-202ENST00000465601 NAA16Q6N069 864 aaPredicted RBP15.07■□□□□ 0
CHPF2-202ENST00000465601 GPATCH3Q96I76 525 aa15.07■□□□□ 0
CHPF2-202ENST00000465601 HAUS7Q99871 368 aa15.07■□□□□ 0
CHPF2-202ENST00000465601 TMOD2Q9NZR1 351 aa15.07■□□□□ 0
CHPF2-202ENST00000465601 ABT1Q9ULW3 272 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms