RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 AP3B2Q13367 1082 aa5.85□□□□□ -1.47
HMGXB4-205ENST00000464480 PCNX4Q63HM2 1172 aa5.85□□□□□ -1.47
HMGXB4-205ENST00000464480 C8orf86Q6ZUL3 223 aa5.85□□□□□ -1.47
HMGXB4-205ENST00000464480 MAP4K3Q8IVH8 894 aa5.85□□□□□ -1.47
HMGXB4-205ENST00000464480 WHAMMQ8TF30 809 aa5.85□□□□□ -1.47
HMGXB4-205ENST00000464480 SLC7A3Q8WY07 619 aa5.85□□□□□ -1.47
HMGXB4-205ENST00000464480 EMILIN2Q9BXX0 1053 aa5.85□□□□□ -1.47
HMGXB4-205ENST00000464480 ACBD3Q9H3P7 528 aa5.85□□□□□ -1.47
HMGXB4-205ENST00000464480 RRAGCQ9HB90 399 aa5.85□□□□□ -1.47
HMGXB4-205ENST00000464480 CAPN10Q9HC96 672 aa5.85□□□□□ -1.47
HMGXB4-205ENST00000464480 OSGEPQ9NPF4 335 aa5.85□□□□□ -1.47
HMGXB4-205ENST00000464480 SOX1O00570 391 aaPredicted RBP5.84□□□□□ -1.47
HMGXB4-205ENST00000464480 PAGE1O75459 146 aa5.84□□□□□ -1.47
HMGXB4-205ENST00000464480 NID1P14543 1247 aa5.84□□□□□ -1.47
HMGXB4-205ENST00000464480 BAG6P46379 1132 aa5.84□□□□□ -1.47
HMGXB4-205ENST00000464480 KCNMA1Q12791 1236 aa5.84□□□□□ -1.47
HMGXB4-205ENST00000464480 LRRC14Q15048 493 aa5.84□□□□□ -1.47
HMGXB4-205ENST00000464480 DIEXFQ68CQ4 756 aaKnown RBP5.84□□□□□ -1.47
HMGXB4-205ENST00000464480 LLGL2Q6P1M3 1020 aa5.84□□□□□ -1.47
HMGXB4-205ENST00000464480 TXNDC11Q6PKC3 985 aa5.84□□□□□ -1.47
HMGXB4-205ENST00000464480 AGMOQ6ZNB7 445 aa5.84□□□□□ -1.47
HMGXB4-205ENST00000464480 KIAA0825Q8IV33 1275 aa5.84□□□□□ -1.47
HMGXB4-205ENST00000464480 SULF2Q8IWU5 870 aa5.84□□□□□ -1.47
HMGXB4-205ENST00000464480 BEND7Q8N7W2 519 aaPredicted RBP5.84□□□□□ -1.47
HMGXB4-205ENST00000464480 KLHL23Q8NBE8 558 aa5.84□□□□□ -1.47
HMGXB4-205ENST00000464480 PHC3Q8NDX5 983 aa5.84□□□□□ -1.47
HMGXB4-205ENST00000464480 RHOVQ96L33 236 aa5.84□□□□□ -1.47
HMGXB4-205ENST00000464480 TINF2Q9BSI4 451 aa5.84□□□□□ -1.47
HMGXB4-205ENST00000464480 SPON2Q9BUD6 331 aa5.84□□□□□ -1.47
HMGXB4-205ENST00000464480 CYP8B1Q9UNU6 501 aa5.84□□□□□ -1.47
HMGXB4-205ENST00000464480 INPP5FQ9Y2H2 1132 aa5.84□□□□□ -1.47
HMGXB4-205ENST00000464480 MINDY4BA8MYZ0 360 aa5.83□□□□□ -1.48
HMGXB4-205ENST00000464480 F6X3S4 739 aa5.83□□□□□ -1.48
HMGXB4-205ENST00000464480 FSCN2O14926 492 aa5.83□□□□□ -1.48
HMGXB4-205ENST00000464480 CYP11A1P05108 521 aa5.83□□□□□ -1.48
HMGXB4-205ENST00000464480 EIF4A3P38919 411 aaKnown RBP5.83□□□□□ -1.48
HMGXB4-205ENST00000464480 GSTM4Q03013 218 aa5.83□□□□□ -1.48
HMGXB4-205ENST00000464480 LMNB2Q03252 620 aa5.83□□□□□ -1.48
HMGXB4-205ENST00000464480 SF3A1Q15459 793 aaKnown RBP5.83□□□□□ -1.48
HMGXB4-205ENST00000464480 SNAP47Q5SQN1 464 aa5.83□□□□□ -1.48
HMGXB4-205ENST00000464480 DTWD1Q8N5C7 304 aa5.83□□□□□ -1.48
HMGXB4-205ENST00000464480 CARD10Q9BWT7 1032 aa5.83□□□□□ -1.48
HMGXB4-205ENST00000464480 CBX8Q9HC52 389 aa5.83□□□□□ -1.48
HMGXB4-205ENST00000464480 SUPT16HQ9Y5B9 1047 aaKnown RBP5.83□□□□□ -1.48
HMGXB4-205ENST00000464480 ARNTP27540 789 aa5.82□□□□□ -1.48
HMGXB4-205ENST00000464480 HP1BP3Q5SSJ5 553 aaPredicted RBP5.82□□□□□ -1.48
HMGXB4-205ENST00000464480 TRAPPC3LQ5T215 181 aa5.82□□□□□ -1.48
HMGXB4-205ENST00000464480 DMRTC2Q8IXT2 367 aaPredicted RBP5.82□□□□□ -1.48
HMGXB4-205ENST00000464480 TMEM151AQ8N4L1 468 aa5.82□□□□□ -1.48
HMGXB4-205ENST00000464480 SREK1Q8WXA9 508 aaKnown RBP5.82□□□□□ -1.48
HMGXB4-205ENST00000464480 CORO1BQ9BR76 489 aa5.82□□□□□ -1.48
HMGXB4-205ENST00000464480 TLR6Q9Y2C9 796 aa5.82□□□□□ -1.48
HMGXB4-205ENST00000464480 SPDYE3A6NKU9 549 aa5.81□□□□□ -1.48
HMGXB4-205ENST00000464480 PF4P02776 101 aa5.81□□□□□ -1.48
HMGXB4-205ENST00000464480 GSTP1P09211 210 aaKnown RBP5.81□□□□□ -1.48
HMGXB4-205ENST00000464480 BMP6P22004 513 aa5.81□□□□□ -1.48
HMGXB4-205ENST00000464480 TNNI2P48788 182 aa5.81□□□□□ -1.48
HMGXB4-205ENST00000464480 RAC1P63000 192 aa5.81□□□□□ -1.48
HMGXB4-205ENST00000464480 FAM160A1Q05DH4 1040 aa5.81□□□□□ -1.48
HMGXB4-205ENST00000464480 PAK2Q13177 524 aa5.81□□□□□ -1.48
HMGXB4-205ENST00000464480 CAMK2GQ13555 558 aaPredicted RBP5.81□□□□□ -1.48
HMGXB4-205ENST00000464480 SUZ12Q15022 739 aaKnown RBP5.81□□□□□ -1.48
HMGXB4-205ENST00000464480 POU4F3Q15319 338 aa5.81□□□□□ -1.48
HMGXB4-205ENST00000464480 SCARA3Q6AZY7 606 aa5.81□□□□□ -1.48
HMGXB4-205ENST00000464480 VPS37DQ86XT2 251 aa5.81□□□□□ -1.48
HMGXB4-205ENST00000464480 TRIM42Q8IWZ5 723 aa5.81□□□□□ -1.48
HMGXB4-205ENST00000464480 SLC43A3Q8NBI5 491 aa5.81□□□□□ -1.48
HMGXB4-205ENST00000464480 GPRASP2Q96D09 838 aa5.81□□□□□ -1.48
HMGXB4-205ENST00000464480 SPATA32Q96LK8 384 aa5.81□□□□□ -1.48
HMGXB4-205ENST00000464480 MIR1-1HGQ9H1L0 117 aa5.81□□□□□ -1.48
HMGXB4-205ENST00000464480 KCNQ5Q9NR82 932 aa5.81□□□□□ -1.48
HMGXB4-205ENST00000464480 ADAMTS1Q9UHI8 967 aa5.81□□□□□ -1.48
HMGXB4-205ENST00000464480 GNB5O14775 395 aa5.8□□□□□ -1.48
HMGXB4-205ENST00000464480 TRIM37O94972 964 aa5.8□□□□□ -1.48
HMGXB4-205ENST00000464480 GDF11O95390 407 aa5.8□□□□□ -1.48
HMGXB4-205ENST00000464480 TFE3P19532 575 aaPredicted RBP5.8□□□□□ -1.48
HMGXB4-205ENST00000464480 GJA8P48165 433 aa5.8□□□□□ -1.48
HMGXB4-205ENST00000464480 RASSF7Q02833 373 aa5.8□□□□□ -1.48
HMGXB4-205ENST00000464480 ZNF252P-AS1Q0IIN9 211 aa5.8□□□□□ -1.48
HMGXB4-205ENST00000464480 COL9A3Q14050 684 aaPredicted RBP5.8□□□□□ -1.48
HMGXB4-205ENST00000464480 SETDB1Q15047 1291 aa5.8□□□□□ -1.48
HMGXB4-205ENST00000464480 HGSNATQ68CP4 663 aa5.8□□□□□ -1.48
HMGXB4-205ENST00000464480 CCDC84Q86UT8 332 aaPredicted RBP5.8□□□□□ -1.48
HMGXB4-205ENST00000464480 GOLM1Q8NBJ4 401 aa5.8□□□□□ -1.48
HMGXB4-205ENST00000464480 ZNF296Q8WUU4 475 aaPredicted RBP5.8□□□□□ -1.48
HMGXB4-205ENST00000464480 USP35Q9P2H5 1018 aa5.8□□□□□ -1.48
HMGXB4-205ENST00000464480 MKL2Q9ULH7 1088 aa5.8□□□□□ -1.48
HMGXB4-205ENST00000464480 CD68P34810 354 aaPredicted RBP5.79□□□□□ -1.48
HMGXB4-205ENST00000464480 NLRP12P59046 1061 aa5.79□□□□□ -1.48
HMGXB4-205ENST00000464480 PDE3AQ14432 1141 aa5.79□□□□□ -1.48
HMGXB4-205ENST00000464480 MAP1SQ66K74 1059 aaPredicted RBP5.79□□□□□ -1.48
HMGXB4-205ENST00000464480 FBXL19Q6PCT2 694 aa5.79□□□□□ -1.48
HMGXB4-205ENST00000464480 PDZD3Q86UT5 571 aa5.79□□□□□ -1.48
HMGXB4-205ENST00000464480 RASGRP4Q8TDF6 673 aa5.79□□□□□ -1.48
HMGXB4-205ENST00000464480 STK35Q8TDR2 534 aa5.79□□□□□ -1.48
HMGXB4-205ENST00000464480 KCNB2Q92953 911 aa5.79□□□□□ -1.48
HMGXB4-205ENST00000464480 KLHDC7BQ96G42 594 aa5.79□□□□□ -1.48
HMGXB4-205ENST00000464480 ACSBG1Q96GR2 724 aa5.79□□□□□ -1.48
HMGXB4-205ENST00000464480 NT5C1AQ9BXI3 368 aa5.79□□□□□ -1.48
HMGXB4-205ENST00000464480 USP26Q9BXU7 913 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms