RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 PDE6AP16499 860 aa17.27■□□□□ 0.36
COL5A1-205ENST00000464187 UBE3CQ15386 1083 aa17.27■□□□□ 0.36
COL5A1-205ENST00000464187 LARP6Q9BRS8 491 aaKnown RBP17.27■□□□□ 0.36
COL5A1-205ENST00000464187 PDRG1Q9NUG6 133 aa17.27■□□□□ 0.36
COL5A1-205ENST00000464187 LRP2BPQ9P2M1 347 aa17.27■□□□□ 0.36
COL5A1-205ENST00000464187 ABCF2Q9UG63 623 aa17.27■□□□□ 0.36
COL5A1-205ENST00000464187 PDS5AQ29RF7 1337 aaKnown RBP17.26■□□□□ 0.35
COL5A1-205ENST00000464187 LARGE1O95461 756 aa17.26■□□□□ 0.35
COL5A1-205ENST00000464187 ZKSCAN1P17029 563 aaPredicted RBP17.26■□□□□ 0.35
COL5A1-205ENST00000464187 MRE11P49959 708 aa17.26■□□□□ 0.35
COL5A1-205ENST00000464187 GAS2L3Q86XJ1 694 aa17.26■□□□□ 0.35
COL5A1-205ENST00000464187 PUS7LQ9H0K6 701 aaKnown RBP17.26■□□□□ 0.35
COL5A1-205ENST00000464187 CYP46A1Q9Y6A2 500 aa17.26■□□□□ 0.35
COL5A1-205ENST00000464187 ZNF532Q9HCE3 1301 aa17.26■□□□□ 0.35
COL5A1-205ENST00000464187 A0A0G2JLW4 131 aa17.26■□□□□ 0.35
COL5A1-205ENST00000464187 M0R2C6 588 aa17.26■□□□□ 0.35
COL5A1-205ENST00000464187 MAGEB6Q8N7X4 407 aa17.26■□□□□ 0.35
COL5A1-205ENST00000464187 TDRD7Q8NHU6 1098 aaKnown RBP17.26■□□□□ 0.35
COL5A1-205ENST00000464187 PANK2Q9BZ23 570 aa17.26■□□□□ 0.35
COL5A1-205ENST00000464187 GRPEL1Q9HAV7 217 aa17.26■□□□□ 0.35
COL5A1-205ENST00000464187 ZNF219Q9P2Y4 722 aaPredicted RBP17.26■□□□□ 0.35
COL5A1-205ENST00000464187 LTBP1Q14766 1721 aa17.25■□□□□ 0.35
COL5A1-205ENST00000464187 TCRBV5S4A2TA0A5A2 114 aa17.25■□□□□ 0.35
COL5A1-205ENST00000464187 PRPF40AO75400 957 aaKnown RBP17.25■□□□□ 0.35
COL5A1-205ENST00000464187 DPEP1P16444 411 aa17.25■□□□□ 0.35
COL5A1-205ENST00000464187 KCNA3P22001 575 aa17.25■□□□□ 0.35
COL5A1-205ENST00000464187 CHAF1AQ13111 956 aaPredicted RBP17.25■□□□□ 0.35
COL5A1-205ENST00000464187 C7orf43Q8WVR3 580 aa17.25■□□□□ 0.35
COL5A1-205ENST00000464187 CD209Q9NNX6 404 aa17.25■□□□□ 0.35
COL5A1-205ENST00000464187 TTLL6Q8N841 843 aa17.24■□□□□ 0.35
COL5A1-205ENST00000464187 SGIP1Q9BQI5 828 aa17.24■□□□□ 0.35
COL5A1-205ENST00000464187 JAG2Q9Y219 1238 aa17.24■□□□□ 0.35
COL5A1-205ENST00000464187 MYH7P12883 1935 aa17.24■□□□□ 0.35
COL5A1-205ENST00000464187 GPT2Q8TD30 523 aa17.24■□□□□ 0.35
COL5A1-205ENST00000464187 ZC3H12CQ9C0D7 883 aaKnown RBP17.24■□□□□ 0.35
COL5A1-205ENST00000464187 RAI14Q9P0K7 980 aa17.24■□□□□ 0.35
COL5A1-205ENST00000464187 TAF6LQ9Y6J9 622 aa17.24■□□□□ 0.35
COL5A1-205ENST00000464187 DUOX1Q9NRD9 1551 aa17.23■□□□□ 0.35
COL5A1-205ENST00000464187 WDR33Q9C0J8 1336 aaKnown RBP17.23■□□□□ 0.35
COL5A1-205ENST00000464187 SLX4Q8IY92 1834 aa17.23■□□□□ 0.35
COL5A1-205ENST00000464187 RIMBP2O15034 1052 aa17.23■□□□□ 0.35
COL5A1-205ENST00000464187 IL1R1P14778 569 aa17.23■□□□□ 0.35
COL5A1-205ENST00000464187 TGFB2P61812 414 aa17.23■□□□□ 0.35
COL5A1-205ENST00000464187 COL9A3Q14050 684 aaPredicted RBP17.23■□□□□ 0.35
COL5A1-205ENST00000464187 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.23■□□□□ 0.35
COL5A1-205ENST00000464187 GPAA1O43292 621 aa17.22■□□□□ 0.35
COL5A1-205ENST00000464187 HSPD1P10809 573 aaKnown RBP17.22■□□□□ 0.35
COL5A1-205ENST00000464187 PSMA5P28066 241 aa17.22■□□□□ 0.35
COL5A1-205ENST00000464187 RNF20Q5VTR2 975 aa17.22■□□□□ 0.35
COL5A1-205ENST00000464187 CAVIN1Q6NZI2 390 aaKnown RBP17.22■□□□□ 0.35
COL5A1-205ENST00000464187 ZSCAN31Q96LW9 406 aaPredicted RBP17.22■□□□□ 0.35
COL5A1-205ENST00000464187 DSCC1Q9BVC3 393 aa17.22■□□□□ 0.35
COL5A1-205ENST00000464187 C21orf2O43822 256 aa17.21■□□□□ 0.35
COL5A1-205ENST00000464187 ST3GAL1Q11201 340 aa17.21■□□□□ 0.35
COL5A1-205ENST00000464187 CC2D2BQ6DHV5 1058 aa17.21■□□□□ 0.35
COL5A1-205ENST00000464187 ILDR2Q71H61 639 aa17.21■□□□□ 0.35
COL5A1-205ENST00000464187 CCDC83Q8IWF9 413 aa17.21■□□□□ 0.35
COL5A1-205ENST00000464187 WDR66Q8TBY9 1149 aa17.21■□□□□ 0.35
COL5A1-205ENST00000464187 EYA3Q99504 573 aa17.21■□□□□ 0.35
COL5A1-205ENST00000464187 SH2B1Q9NRF2 756 aaPredicted RBP17.21■□□□□ 0.35
COL5A1-205ENST00000464187 PPP1R1BQ9UD71 204 aaPredicted RBP17.21■□□□□ 0.35
COL5A1-205ENST00000464187 NCLP19338 710 aaKnown RBP17.21■□□□□ 0.35
COL5A1-205ENST00000464187 PRDX5P30044 214 aa17.21■□□□□ 0.35
COL5A1-205ENST00000464187 PTGER2P43116 358 aa17.21■□□□□ 0.35
COL5A1-205ENST00000464187 TSGA10IPQ3SY00 556 aa17.21■□□□□ 0.35
COL5A1-205ENST00000464187 AIDAQ96BJ3 306 aa17.21■□□□□ 0.35
COL5A1-205ENST00000464187 COA1Q9GZY4 146 aa17.21■□□□□ 0.35
COL5A1-205ENST00000464187 SMC3Q9UQE7 1217 aa17.21■□□□□ 0.35
COL5A1-205ENST00000464187 CACNA1SQ13698 1873 aa17.21■□□□□ 0.35
COL5A1-205ENST00000464187 MYO5AQ9Y4I1 1855 aaKnown RBP17.21■□□□□ 0.35
COL5A1-205ENST00000464187 DOCK2Q92608 1830 aa17.21■□□□□ 0.34
COL5A1-205ENST00000464187 SALL1Q9NSC2 1324 aa17.2■□□□□ 0.34
COL5A1-205ENST00000464187 ZNF445P59923 1031 aa17.2■□□□□ 0.34
COL5A1-205ENST00000464187 ME3Q16798 604 aa17.2■□□□□ 0.34
COL5A1-205ENST00000464187 RTFDC1Q9BY42 306 aaPredicted RBP17.2■□□□□ 0.34
COL5A1-205ENST00000464187 RTN4Q9NQC3 1192 aaKnown RBP17.2■□□□□ 0.34
COL5A1-205ENST00000464187 U3KPZ7 1027 aaPredicted RBP17.2■□□□□ 0.34
COL5A1-205ENST00000464187 CYP7A1P22680 504 aa17.19■□□□□ 0.34
COL5A1-205ENST00000464187 RPS6KB1P23443 525 aa17.19■□□□□ 0.34
COL5A1-205ENST00000464187 ZSCAN23Q3MJ62 389 aa17.19■□□□□ 0.34
COL5A1-205ENST00000464187 BLOC1S2Q6QNY1 142 aa17.19■□□□□ 0.34
COL5A1-205ENST00000464187 NSUN4Q96CB9 384 aaKnown RBP17.19■□□□□ 0.34
COL5A1-205ENST00000464187 TPCN1Q9ULQ1 816 aa17.19■□□□□ 0.34
COL5A1-205ENST00000464187 KIF13BQ9NQT8 1826 aa17.19■□□□□ 0.34
COL5A1-205ENST00000464187 SNED1Q8TER0 1413 aa17.19■□□□□ 0.34
COL5A1-205ENST00000464187 FOXP2O15409 715 aa17.19■□□□□ 0.34
COL5A1-205ENST00000464187 MECOMQ03112 1051 aa17.19■□□□□ 0.34
COL5A1-205ENST00000464187 SPTY2D1Q68D10 685 aaPredicted RBP17.19■□□□□ 0.34
COL5A1-205ENST00000464187 NAA16Q6N069 864 aaPredicted RBP17.19■□□□□ 0.34
COL5A1-205ENST00000464187 ADGRA1Q86SQ6 560 aa17.19■□□□□ 0.34
COL5A1-205ENST00000464187 KLHL34Q8N239 644 aa17.19■□□□□ 0.34
COL5A1-205ENST00000464187 ZNF384Q8TF68 577 aa17.19■□□□□ 0.34
COL5A1-205ENST00000464187 ALDH8A1Q9H2A2 487 aaPredicted RBP17.19■□□□□ 0.34
COL5A1-205ENST00000464187 PIM2Q9P1W9 311 aa17.19■□□□□ 0.34
COL5A1-205ENST00000464187 RBM27Q9P2N5 1060 aaKnown RBP17.19■□□□□ 0.34
COL5A1-205ENST00000464187 MBD4O95243 580 aa17.18■□□□□ 0.34
COL5A1-205ENST00000464187 ZSCAN22P10073 491 aaPredicted RBP17.18■□□□□ 0.34
COL5A1-205ENST00000464187 SYT1P21579 422 aa17.18■□□□□ 0.34
COL5A1-205ENST00000464187 DOK7Q18PE1 504 aa17.18■□□□□ 0.34
COL5A1-205ENST00000464187 MIGA1Q8NAN2 632 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms