RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 TDRD3Q9H7E2 651 aaKnown RBP21.86■■□□□ 1.09
HMGN1-210ENST00000464078 ELP3Q9H9T3 547 aa21.86■■□□□ 1.09
HMGN1-210ENST00000464078 EFCC1Q9HA90 598 aa21.86■■□□□ 1.09
HMGN1-210ENST00000464078 SPINK5Q9NQ38 1064 aaPredicted RBP21.86■■□□□ 1.09
HMGN1-210ENST00000464078 BRCA2P51587 3418 aa21.86■■□□□ 1.09
HMGN1-210ENST00000464078 UTYO14607 1347 aa21.85■■□□□ 1.09
HMGN1-210ENST00000464078 MROH5Q6ZUA9 1318 aa21.85■■□□□ 1.09
HMGN1-210ENST00000464078 POTEFA5A3E0 1075 aa21.85■■□□□ 1.09
HMGN1-210ENST00000464078 CDAN1Q8IWY9 1227 aa21.85■■□□□ 1.09
HMGN1-210ENST00000464078 RIPOR2Q9Y4F9 1068 aa21.85■■□□□ 1.09
HMGN1-210ENST00000464078 CRKP46108 304 aa21.84■■□□□ 1.09
HMGN1-210ENST00000464078 TNNI2P48788 182 aa21.84■■□□□ 1.09
HMGN1-210ENST00000464078 HDLBPQ00341 1268 aaKnown RBP21.84■■□□□ 1.09
HMGN1-210ENST00000464078 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.84■■□□□ 1.09
HMGN1-210ENST00000464078 PUS3Q9BZE2 481 aaKnown RBP21.84■■□□□ 1.09
HMGN1-210ENST00000464078 VGLL4Q14135 290 aa21.83■■□□□ 1.09
HMGN1-210ENST00000464078 RABL6Q3YEC7 729 aaPredicted RBP21.83■■□□□ 1.09
HMGN1-210ENST00000464078 FBXO33Q7Z6M2 555 aa21.83■■□□□ 1.09
HMGN1-210ENST00000464078 BRI3BPQ8WY22 251 aa21.83■■□□□ 1.09
HMGN1-210ENST00000464078 SUCLG2Q96I99 432 aa21.83■■□□□ 1.09
HMGN1-210ENST00000464078 TMEM39BQ9GZU3 492 aa21.83■■□□□ 1.09
HMGN1-210ENST00000464078 GTF2A2P52657 109 aa21.82■■□□□ 1.08
HMGN1-210ENST00000464078 CAP1Q01518 475 aa21.82■■□□□ 1.08
HMGN1-210ENST00000464078 TBC1D22AQ8WUA7 517 aa21.82■■□□□ 1.08
HMGN1-210ENST00000464078 SALL2Q9Y467 1007 aaPredicted RBP21.82■■□□□ 1.08
HMGN1-210ENST00000464078 CEP290O15078 2479 aa21.82■■□□□ 1.08
HMGN1-210ENST00000464078 CCL15-CCL14A0A0B4J2E2 113 aa21.81■■□□□ 1.08
HMGN1-210ENST00000464078 TCP10L2B9ZVM9 353 aa21.81■■□□□ 1.08
HMGN1-210ENST00000464078 NBPF7P0C2Y1 421 aaPredicted RBP21.81■■□□□ 1.08
HMGN1-210ENST00000464078 MAP3K9P80192 1104 aa21.81■■□□□ 1.08
HMGN1-210ENST00000464078 CCL15Q16663 113 aa21.81■■□□□ 1.08
HMGN1-210ENST00000464078 SLC4A10Q6U841 1118 aa21.81■■□□□ 1.08
HMGN1-210ENST00000464078 RPAP1Q9BWH6 1393 aaPredicted RBP21.8■■□□□ 1.08
HMGN1-210ENST00000464078 SPDYE5A6NIY4 337 aa21.8■■□□□ 1.08
HMGN1-210ENST00000464078 ARHGEF6Q15052 776 aa21.8■■□□□ 1.08
HMGN1-210ENST00000464078 GRIK5Q16478 980 aa21.8■■□□□ 1.08
HMGN1-210ENST00000464078 VGLL2Q8N8G2 317 aa21.8■■□□□ 1.08
HMGN1-210ENST00000464078 CNKSR2Q8WXI2 1034 aa21.8■■□□□ 1.08
HMGN1-210ENST00000464078 CSADQ9Y600 493 aa21.8■■□□□ 1.08
HMGN1-210ENST00000464078 TAF1CQ15572 869 aaPredicted RBP21.79■■□□□ 1.08
HMGN1-210ENST00000464078 FKBP1CQ5VVH2 108 aa21.79■■□□□ 1.08
HMGN1-210ENST00000464078 VPS37DQ86XT2 251 aa21.79■■□□□ 1.08
HMGN1-210ENST00000464078 TEKT1Q969V4 418 aa21.79■■□□□ 1.08
HMGN1-210ENST00000464078 ZNF333Q96JL9 665 aa21.79■■□□□ 1.08
HMGN1-210ENST00000464078 MRIQ9BWK5 157 aa21.79■■□□□ 1.08
HMGN1-210ENST00000464078 BICC1Q9H694 974 aaKnown RBP21.79■■□□□ 1.08
HMGN1-210ENST00000464078 ZFYVE28Q9HCC9 887 aa21.79■■□□□ 1.08
HMGN1-210ENST00000464078 ZCCHC17Q9NP64 241 aaKnown RBP21.79■■□□□ 1.08
HMGN1-210ENST00000464078 KIF16BQ96L93 1317 aa21.79■■□□□ 1.08
HMGN1-210ENST00000464078 FAM83AQ86UY5 434 aa21.78■■□□□ 1.08
HMGN1-210ENST00000464078 FAM43AQ8N2R8 423 aa21.78■■□□□ 1.08
HMGN1-210ENST00000464078 OTUD5Q96G74 571 aa21.78■■□□□ 1.08
HMGN1-210ENST00000464078 PDE8BO95263 885 aa21.77■■□□□ 1.08
HMGN1-210ENST00000464078 CAVIN4Q5BKX8 364 aa21.77■■□□□ 1.08
HMGN1-210ENST00000464078 ANKRD44Q8N8A2 993 aa21.77■■□□□ 1.08
HMGN1-210ENST00000464078 ZDHHC15Q96MV8 337 aa21.77■■□□□ 1.08
HMGN1-210ENST00000464078 IQSEC3Q9UPP2 1182 aaPredicted RBP21.77■■□□□ 1.08
HMGN1-210ENST00000464078 SUGT1Q9Y2Z0 365 aa21.77■■□□□ 1.08
HMGN1-210ENST00000464078 SNCAIPQ9Y6H5 919 aa21.77■■□□□ 1.08
HMGN1-210ENST00000464078 MAST3O60307 1309 aa21.77■■□□□ 1.07
HMGN1-210ENST00000464078 LRRC24Q50LG9 513 aa21.76■■□□□ 1.07
HMGN1-210ENST00000464078 HABP4Q5JVS0 413 aaKnown RBP21.76■■□□□ 1.07
HMGN1-210ENST00000464078 METTL24Q5JXM2 366 aa21.76■■□□□ 1.07
HMGN1-210ENST00000464078 ERO1BQ86YB8 467 aa21.76■■□□□ 1.07
HMGN1-210ENST00000464078 HOOK2Q96ED9 719 aa21.76■■□□□ 1.07
HMGN1-210ENST00000464078 MYH13Q9UKX3 1938 aa21.76■■□□□ 1.07
HMGN1-210ENST00000464078 ANP32CO43423 234 aa21.75■■□□□ 1.07
HMGN1-210ENST00000464078 CETPP11597 493 aa21.75■■□□□ 1.07
HMGN1-210ENST00000464078 EN2P19622 333 aaPredicted RBP21.75■■□□□ 1.07
HMGN1-210ENST00000464078 CHAF1AQ13111 956 aaPredicted RBP21.75■■□□□ 1.07
HMGN1-210ENST00000464078 SLC9C1Q4G0N8 1177 aa21.75■■□□□ 1.07
HMGN1-210ENST00000464078 TMOD2Q9NZR1 351 aa21.75■■□□□ 1.07
HMGN1-210ENST00000464078 TLR2O60603 784 aa21.74■■□□□ 1.07
HMGN1-210ENST00000464078 WDHD1O75717 1129 aaPredicted RBP21.74■■□□□ 1.07
HMGN1-210ENST00000464078 CACNB3P54284 484 aa21.74■■□□□ 1.07
HMGN1-210ENST00000464078 APOBEC3HQ6NTF7 200 aaKnown RBP21.74■■□□□ 1.07
HMGN1-210ENST00000464078 NBPF11Q86T75 865 aa21.74■■□□□ 1.07
HMGN1-210ENST00000464078 WRNIP1Q96S55 665 aa21.74■■□□□ 1.07
HMGN1-210ENST00000464078 TMEM106CQ9BVX2 250 aa21.74■■□□□ 1.07
HMGN1-210ENST00000464078 PTCH2Q9Y6C5 1203 aa21.74■■□□□ 1.07
HMGN1-210ENST00000464078 ZNF521Q96K83 1311 aa21.74■■□□□ 1.07
HMGN1-210ENST00000464078 ZSWIM8A7E2V4 1837 aa21.73■■□□□ 1.07
HMGN1-210ENST00000464078 FRAT2O75474 233 aaPredicted RBP21.73■■□□□ 1.07
HMGN1-210ENST00000464078 PPIL2Q13356 520 aa21.73■■□□□ 1.07
HMGN1-210ENST00000464078 HHIPL2Q6UWX4 724 aa21.73■■□□□ 1.07
HMGN1-210ENST00000464078 PTPRCP08575 1304 aa21.73■■□□□ 1.07
HMGN1-210ENST00000464078 GNRH1P01148 92 aa21.72■■□□□ 1.07
HMGN1-210ENST00000464078 SNAPC2Q13487 334 aa21.72■■□□□ 1.07
HMGN1-210ENST00000464078 PUM3Q15397 648 aaKnown RBP21.72■■□□□ 1.07
HMGN1-210ENST00000464078 IRF6O14896 467 aa21.71■■□□□ 1.07
HMGN1-210ENST00000464078 FGFR2P21802 821 aa21.71■■□□□ 1.07
HMGN1-210ENST00000464078 BCAMP50895 628 aa21.71■■□□□ 1.07
HMGN1-210ENST00000464078 LACTBP83111 547 aaPredicted RBP21.71■■□□□ 1.07
HMGN1-210ENST00000464078 DCAF15Q66K64 600 aa21.71■■□□□ 1.07
HMGN1-210ENST00000464078 BTBD19C9JJ37 291 aa21.7■■□□□ 1.06
HMGN1-210ENST00000464078 IFIT1P09914 478 aaKnown RBP21.7■■□□□ 1.06
HMGN1-210ENST00000464078 MRPL50Q8N5N7 158 aaKnown RBP21.7■■□□□ 1.06
HMGN1-210ENST00000464078 ZKSCAN4Q969J2 545 aaPredicted RBP21.7■■□□□ 1.06
HMGN1-210ENST00000464078 PRMT2P55345 433 aa21.69■■□□□ 1.06
HMGN1-210ENST00000464078 KIF22Q14807 665 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms