RNA–Protein interactions for RNA: ENST00000463994.4

CDKL5-203, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 2,632 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-203ENST00000463994 ARPC5LQ9BPX5 153 aa8.11□□□□□ -1.11
CDKL5-203ENST00000463994 TRIM7Q9C029 511 aa8.11□□□□□ -1.11
CDKL5-203ENST00000463994 NAT10Q9H0A0 1025 aaKnown RBP8.11□□□□□ -1.11
CDKL5-203ENST00000463994 GBP3Q9H0R5 595 aa8.11□□□□□ -1.11
CDKL5-203ENST00000463994 IMPACTQ9P2X3 320 aa8.11□□□□□ -1.11
CDKL5-203ENST00000463994 U3KPZ7 1027 aaPredicted RBP8.11□□□□□ -1.11
CDKL5-203ENST00000463994 SPATA31D1Q6ZQQ2 1576 aa8.11□□□□□ -1.11
CDKL5-203ENST00000463994 PHACTR2O75167 634 aa8.11□□□□□ -1.11
CDKL5-203ENST00000463994 RASSF9O75901 435 aa8.11□□□□□ -1.11
CDKL5-203ENST00000463994 IBSPP21815 317 aaPredicted RBP8.11□□□□□ -1.11
CDKL5-203ENST00000463994 PAPOLAP51003 745 aaKnown RBP8.11□□□□□ -1.11
CDKL5-203ENST00000463994 ROR2Q01974 943 aaKnown RBP8.11□□□□□ -1.11
CDKL5-203ENST00000463994 LRRC23Q53EV4 343 aaPredicted RBP8.11□□□□□ -1.11
CDKL5-203ENST00000463994 MICALCLQ6ZW33 695 aa8.11□□□□□ -1.11
CDKL5-203ENST00000463994 CCDC150Q8NCX0 1101 aa8.11□□□□□ -1.11
CDKL5-203ENST00000463994 FAM163AQ96GL9 167 aaPredicted RBP8.11□□□□□ -1.11
CDKL5-203ENST00000463994 RBM17Q96I25 401 aaKnown RBP8.11□□□□□ -1.11
CDKL5-203ENST00000463994 AGAP3Q96P47 875 aa8.11□□□□□ -1.11
CDKL5-203ENST00000463994 FMNL2Q96PY5 1086 aa8.11□□□□□ -1.11
CDKL5-203ENST00000463994 ALS2CR12Q96Q35 445 aa8.11□□□□□ -1.11
CDKL5-203ENST00000463994 MMADHCQ9H3L0 296 aaPredicted RBP8.11□□□□□ -1.11
CDKL5-203ENST00000463994 TMEM165Q9HC07 324 aa8.11□□□□□ -1.11
CDKL5-203ENST00000463994 PICK1Q9NRD5 415 aa8.11□□□□□ -1.11
CDKL5-203ENST00000463994 USP16Q9Y5T5 823 aa8.11□□□□□ -1.11
CDKL5-203ENST00000463994 ERICH2A1L162 156 aa8.1□□□□□ -1.11
CDKL5-203ENST00000463994 GOLGA6L10A6NI86 522 aa8.1□□□□□ -1.11
CDKL5-203ENST00000463994 ZEB2O60315 1214 aa8.1□□□□□ -1.11
CDKL5-203ENST00000463994 RNF40O75150 1001 aa8.1□□□□□ -1.11
CDKL5-203ENST00000463994 GCLCP48506 637 aaPredicted RBP8.1□□□□□ -1.11
CDKL5-203ENST00000463994 TUBB4BP68371 445 aa8.1□□□□□ -1.11
CDKL5-203ENST00000463994 CCDC15Q0P6D6 951 aa8.1□□□□□ -1.11
CDKL5-203ENST00000463994 SMARCC1Q92922 1105 aaPredicted RBP8.1□□□□□ -1.11
CDKL5-203ENST00000463994 SYTL4Q96C24 671 aaPredicted RBP8.1□□□□□ -1.11
CDKL5-203ENST00000463994 OSBPL5Q9H0X9 879 aaPredicted RBP8.1□□□□□ -1.11
CDKL5-203ENST00000463994 TNMDQ9H2S6 317 aa8.1□□□□□ -1.11
CDKL5-203ENST00000463994 PCDHGC5Q9Y5F6 944 aa8.1□□□□□ -1.11
CDKL5-203ENST00000463994 MED14O60244 1454 aa8.1□□□□□ -1.11
CDKL5-203ENST00000463994 MSH6P52701 1360 aa8.1□□□□□ -1.11
CDKL5-203ENST00000463994 TRIM27P14373 513 aa8.1□□□□□ -1.11
CDKL5-203ENST00000463994 SYT1P21579 422 aa8.1□□□□□ -1.11
CDKL5-203ENST00000463994 FOSBP53539 338 aa8.1□□□□□ -1.11
CDKL5-203ENST00000463994 G3BP1Q13283 466 aaKnown RBP eCLIP8.1□□□□□ -1.11
CDKL5-203ENST00000463994 CCDC40Q4G0X9 1142 aa8.1□□□□□ -1.11
CDKL5-203ENST00000463994 RNF25Q96BH1 459 aaPredicted RBP8.1□□□□□ -1.11
CDKL5-203ENST00000463994 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.1□□□□□ -1.11
CDKL5-203ENST00000463994 CENPHQ9H3R5 247 aa8.1□□□□□ -1.11
CDKL5-203ENST00000463994 MEFVO15553 781 aaPredicted RBP8.09□□□□□ -1.11
CDKL5-203ENST00000463994 ONECUT3O60422 494 aaPredicted RBP8.09□□□□□ -1.11
CDKL5-203ENST00000463994 GSPT1P15170 499 aaKnown RBP8.09□□□□□ -1.11
CDKL5-203ENST00000463994 FERP16591 822 aa8.09□□□□□ -1.11
CDKL5-203ENST00000463994 KIF4BQ2VIQ3 1234 aa8.09□□□□□ -1.11
CDKL5-203ENST00000463994 MIS18BP1Q6P0N0 1132 aa8.09□□□□□ -1.11
CDKL5-203ENST00000463994 ATF7IPQ6VMQ6 1270 aa8.09□□□□□ -1.11
CDKL5-203ENST00000463994 BCAS4Q8TDM0 211 aa8.09□□□□□ -1.11
CDKL5-203ENST00000463994 TRIM4Q9C037 500 aa8.09□□□□□ -1.11
CDKL5-203ENST00000463994 SLC39A2Q9NP94 309 aa8.09□□□□□ -1.11
CDKL5-203ENST00000463994 IGSF5Q9NSI5 407 aa8.09□□□□□ -1.11
CDKL5-203ENST00000463994 RAB21Q9UL25 225 aa8.09□□□□□ -1.11
CDKL5-203ENST00000463994 CORO1CQ9ULV4 474 aaPredicted RBP8.09□□□□□ -1.11
CDKL5-203ENST00000463994 GNAI3P08754 354 aa8.09□□□□□ -1.11
CDKL5-203ENST00000463994 DEUP1Q05D60 604 aa8.09□□□□□ -1.11
CDKL5-203ENST00000463994 PSME1Q06323 249 aa8.09□□□□□ -1.11
CDKL5-203ENST00000463994 CASP8Q14790 479 aa8.09□□□□□ -1.11
CDKL5-203ENST00000463994 TRIM65Q6PJ69 517 aa8.09□□□□□ -1.11
CDKL5-203ENST00000463994 YTHDF3Q7Z739 585 aaKnown RBP8.09□□□□□ -1.11
CDKL5-203ENST00000463994 PARP9Q8IXQ6 854 aa8.09□□□□□ -1.11
CDKL5-203ENST00000463994 CCDC170Q8IYT3 715 aa8.09□□□□□ -1.11
CDKL5-203ENST00000463994 TRIM58Q8NG06 486 aa8.09□□□□□ -1.11
CDKL5-203ENST00000463994 PAPOLBQ9NRJ5 636 aaKnown RBP8.09□□□□□ -1.11
CDKL5-203ENST00000463994 STK24Q9Y6E0 443 aa8.09□□□□□ -1.11
CDKL5-203ENST00000463994 TTC21BQ7Z4L5 1316 aa8.09□□□□□ -1.12
CDKL5-203ENST00000463994 LMTK2Q8IWU2 1503 aa8.09□□□□□ -1.12
CDKL5-203ENST00000463994 CLTCL1P53675 1640 aa8.08□□□□□ -1.12
CDKL5-203ENST00000463994 TUBBP07437 444 aa8.08□□□□□ -1.12
CDKL5-203ENST00000463994 RPSAP08865 295 aaKnown RBP8.08□□□□□ -1.12
CDKL5-203ENST00000463994 ZNF24P17028 368 aa8.08□□□□□ -1.12
CDKL5-203ENST00000463994 IRAK1P51617 712 aa8.08□□□□□ -1.12
CDKL5-203ENST00000463994 SLMAPQ14BN4 828 aa8.08□□□□□ -1.12
CDKL5-203ENST00000463994 CAMK4Q16566 473 aa8.08□□□□□ -1.12
CDKL5-203ENST00000463994 TAX1BP1Q86VP1 789 aa8.08□□□□□ -1.12
CDKL5-203ENST00000463994 KIAA0825Q8IV33 1275 aa8.08□□□□□ -1.12
CDKL5-203ENST00000463994 RBM41Q96IZ5 413 aaKnown RBP8.08□□□□□ -1.12
CDKL5-203ENST00000463994 UBA5Q9GZZ9 404 aa8.08□□□□□ -1.12
CDKL5-203ENST00000463994 TSPYL2Q9H2G4 693 aaPredicted RBP8.08□□□□□ -1.12
CDKL5-203ENST00000463994 VCPKMTQ9H867 229 aa8.08□□□□□ -1.12
CDKL5-203ENST00000463994 DDX19AQ9NUU7 478 aaKnown RBP8.08□□□□□ -1.12
CDKL5-203ENST00000463994 RTEL1Q9NZ71 1219 aa8.08□□□□□ -1.12
CDKL5-203ENST00000463994 CEP126Q9P2H0 1117 aa8.08□□□□□ -1.12
CDKL5-203ENST00000463994 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.08□□□□□ -1.12
CDKL5-203ENST00000463994 RTL1A6NKG5 1358 aa8.08□□□□□ -1.12
CDKL5-203ENST00000463994 TNRQ92752 1358 aa8.08□□□□□ -1.12
CDKL5-203ENST00000463994 F13A1P00488 732 aa8.08□□□□□ -1.12
CDKL5-203ENST00000463994 NBPF7P0C2Y1 421 aaPredicted RBP8.08□□□□□ -1.12
CDKL5-203ENST00000463994 SFPQP23246 707 aaKnown RBP eCLIP8.08□□□□□ -1.12
CDKL5-203ENST00000463994 AARSP49588 968 aaKnown RBP eCLIP8.08□□□□□ -1.12
CDKL5-203ENST00000463994 RBM43Q6ZSC3 357 aaKnown RBP8.08□□□□□ -1.12
CDKL5-203ENST00000463994 CKAP2LQ8IYA6 745 aa8.08□□□□□ -1.12
CDKL5-203ENST00000463994 ZCRB1Q8TBF4 217 aaKnown RBP8.08□□□□□ -1.12
CDKL5-203ENST00000463994 CCDC47Q96A33 483 aaKnown RBP8.08□□□□□ -1.12
CDKL5-203ENST00000463994 DTNBP1Q96EV8 351 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms