RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 NEUROD6Q96NK8 337 aa16.05■□□□□ 0.16
XRN1-203ENST00000463916 FZD1Q9UP38 647 aa16.05■□□□□ 0.16
XRN1-203ENST00000463916 MYH13Q9UKX3 1938 aa16.05■□□□□ 0.16
XRN1-203ENST00000463916 THSD7BQ9C0I4 1608 aa16.04■□□□□ 0.16
XRN1-203ENST00000463916 UBE2Q2LH0YL09 131 aa16.04■□□□□ 0.16
XRN1-203ENST00000463916 SURF6O75683 361 aaKnown RBP16.04■□□□□ 0.16
XRN1-203ENST00000463916 RASGRF1Q13972 1273 aa16.04■□□□□ 0.16
XRN1-203ENST00000463916 SPDYE2Q495Y8 402 aa16.04■□□□□ 0.16
XRN1-203ENST00000463916 GNL3LQ9NVN8 582 aaKnown RBP16.04■□□□□ 0.16
XRN1-203ENST00000463916 ZNF70Q9UC06 446 aaPredicted RBP16.04■□□□□ 0.16
XRN1-203ENST00000463916 MS4A1P11836 297 aa16.04■□□□□ 0.16
XRN1-203ENST00000463916 PRDX5P30044 214 aa16.04■□□□□ 0.16
XRN1-203ENST00000463916 HDLBPQ00341 1268 aaKnown RBP16.04■□□□□ 0.16
XRN1-203ENST00000463916 MAP2K2P36507 400 aa16.03■□□□□ 0.16
XRN1-203ENST00000463916 ZNF157P51786 506 aaPredicted RBP16.03■□□□□ 0.16
XRN1-203ENST00000463916 PRKG1Q13976 671 aa16.03■□□□□ 0.16
XRN1-203ENST00000463916 COL13A1Q5TAT6 717 aaPredicted RBP16.03■□□□□ 0.16
XRN1-203ENST00000463916 APOBEC3HQ6NTF7 200 aaKnown RBP16.03■□□□□ 0.16
XRN1-203ENST00000463916 TEKT1Q969V4 418 aa16.03■□□□□ 0.16
XRN1-203ENST00000463916 YTHDC1Q96MU7 727 aaKnown RBP16.03■□□□□ 0.16
XRN1-203ENST00000463916 ZBTB40Q9NUA8 1239 aa16.03■□□□□ 0.16
XRN1-203ENST00000463916 DENND2AQ9ULE3 1009 aa16.03■□□□□ 0.16
XRN1-203ENST00000463916 NOP58Q9Y2X3 529 aaKnown RBP16.03■□□□□ 0.16
XRN1-203ENST00000463916 SUGT1Q9Y2Z0 365 aa16.03■□□□□ 0.16
XRN1-203ENST00000463916 PAPPA2Q9BXP8 1791 aa16.03■□□□□ 0.16
XRN1-203ENST00000463916 FKBP1BP68106 108 aa16.03■□□□□ 0.16
XRN1-203ENST00000463916 RASA3Q14644 834 aa16.03■□□□□ 0.16
XRN1-203ENST00000463916 CDAN1Q8IWY9 1227 aa16.03■□□□□ 0.16
XRN1-203ENST00000463916 ZDHHC15Q96MV8 337 aa16.03■□□□□ 0.16
XRN1-203ENST00000463916 MRIQ9BWK5 157 aa16.03■□□□□ 0.16
XRN1-203ENST00000463916 SSC5DA1L4H1 1573 aa16.02■□□□□ 0.16
XRN1-203ENST00000463916 SEMA3EO15041 775 aa16.02■□□□□ 0.15
XRN1-203ENST00000463916 CACNB3P54284 484 aa16.02■□□□□ 0.15
XRN1-203ENST00000463916 MAP2K1Q02750 393 aaPredicted RBP16.02■□□□□ 0.15
XRN1-203ENST00000463916 DIXDC1Q155Q3 683 aa16.02■□□□□ 0.15
XRN1-203ENST00000463916 NBPF12Q5TAG4 269 aaPredicted RBP16.02■□□□□ 0.15
XRN1-203ENST00000463916 ZBTB22O15209 634 aa16.01■□□□□ 0.15
XRN1-203ENST00000463916 TTLL12Q14166 644 aaPredicted RBP16.01■□□□□ 0.15
XRN1-203ENST00000463916 PI16Q6UXB8 463 aa16.01■□□□□ 0.15
XRN1-203ENST00000463916 SIRT2Q8IXJ6 389 aa16.01■□□□□ 0.15
XRN1-203ENST00000463916 DDX19BQ9UMR2 479 aa16.01■□□□□ 0.15
XRN1-203ENST00000463916 SALL1Q9NSC2 1324 aa16.01■□□□□ 0.15
XRN1-203ENST00000463916 TCP10L2B9ZVM9 353 aa16.01■□□□□ 0.15
XRN1-203ENST00000463916 NOGQ13253 232 aa16.01■□□□□ 0.15
XRN1-203ENST00000463916 OS9Q13438 667 aaPredicted RBP16.01■□□□□ 0.15
XRN1-203ENST00000463916 HHIPL2Q6UWX4 724 aa16.01■□□□□ 0.15
XRN1-203ENST00000463916 NF2P35240 595 aa16■□□□□ 0.15
XRN1-203ENST00000463916 TNNI3KQ59H18 835 aa16■□□□□ 0.15
XRN1-203ENST00000463916 CCDC102AQ96A19 550 aa16■□□□□ 0.15
XRN1-203ENST00000463916 TEPSINQ96N21 525 aa16■□□□□ 0.15
XRN1-203ENST00000463916 HMG20BQ9P0W2 317 aa16■□□□□ 0.15
XRN1-203ENST00000463916 EXOC6BQ9Y2D4 811 aa16■□□□□ 0.15
XRN1-203ENST00000463916 PPP2R3BQ9Y5P8 575 aa16■□□□□ 0.15
XRN1-203ENST00000463916 FPGT-TNNI3KV9GXZ4 949 aa16■□□□□ 0.15
XRN1-203ENST00000463916 LDHBP07195 334 aaKnown RBP15.99■□□□□ 0.15
XRN1-203ENST00000463916 SLC10A3P09131 477 aa15.99■□□□□ 0.15
XRN1-203ENST00000463916 PDE3AQ14432 1141 aa15.99■□□□□ 0.15
XRN1-203ENST00000463916 RASAL3Q86YV0 1011 aa15.99■□□□□ 0.15
XRN1-203ENST00000463916 DBNDD2Q9BQY9 259 aa15.99■□□□□ 0.15
XRN1-203ENST00000463916 TMEM39BQ9GZU3 492 aa15.99■□□□□ 0.15
XRN1-203ENST00000463916 GPR108Q9NPR9 543 aa15.99■□□□□ 0.15
XRN1-203ENST00000463916 DAGLAQ9Y4D2 1042 aa15.99■□□□□ 0.15
XRN1-203ENST00000463916 MAST3O60307 1309 aa15.99■□□□□ 0.15
XRN1-203ENST00000463916 KIF23Q02241 960 aaPredicted RBP15.99■□□□□ 0.15
XRN1-203ENST00000463916 GORABQ5T7V8 394 aa15.99■□□□□ 0.15
XRN1-203ENST00000463916 AIDAQ96BJ3 306 aa15.99■□□□□ 0.15
XRN1-203ENST00000463916 ANGEL1Q9UNK9 670 aaKnown RBP15.99■□□□□ 0.15
XRN1-203ENST00000463916 MCAMP43121 646 aa15.98■□□□□ 0.15
XRN1-203ENST00000463916 PDS5AQ29RF7 1337 aaKnown RBP15.98■□□□□ 0.15
XRN1-203ENST00000463916 LDLRAD1Q5T700 205 aa15.98■□□□□ 0.15
XRN1-203ENST00000463916 TBC1D9Q6ZT07 1266 aa15.98■□□□□ 0.15
XRN1-203ENST00000463916 ABCF2Q9UG63 623 aa15.98■□□□□ 0.15
XRN1-203ENST00000463916 ARID4AP29374 1257 aaPredicted RBP15.98■□□□□ 0.15
XRN1-203ENST00000463916 LBX1P52954 281 aa15.98■□□□□ 0.15
XRN1-203ENST00000463916 TNFAIP1Q13829 316 aa15.98■□□□□ 0.15
XRN1-203ENST00000463916 SPATA5Q8NB90 893 aa15.98■□□□□ 0.15
XRN1-203ENST00000463916 ZNF384Q8TF68 577 aa15.98■□□□□ 0.15
XRN1-203ENST00000463916 EAF2Q96CJ1 260 aaPredicted RBP15.98■□□□□ 0.15
XRN1-203ENST00000463916 TLR7Q9NYK1 1049 aaKnown RBP15.98■□□□□ 0.15
XRN1-203ENST00000463916 TSKSQ9UJT2 592 aa15.98■□□□□ 0.15
XRN1-203ENST00000463916 HSPA8P11142 646 aaKnown RBP15.97■□□□□ 0.15
XRN1-203ENST00000463916 CTCFP49711 727 aaPredicted RBP15.97■□□□□ 0.15
XRN1-203ENST00000463916 SUPT20HL1Q3ZLR7 823 aa15.97■□□□□ 0.15
XRN1-203ENST00000463916 ARMC9Q7Z3E5 817 aa15.97■□□□□ 0.15
XRN1-203ENST00000463916 DBNLQ9UJU6 430 aaKnown RBP15.97■□□□□ 0.15
XRN1-203ENST00000463916 USP2O75604 605 aaPredicted RBP15.96■□□□□ 0.15
XRN1-203ENST00000463916 CDC42EP5Q6NZY7 148 aa15.96■□□□□ 0.15
XRN1-203ENST00000463916 RPAP2Q8IXW5 612 aaPredicted RBP15.96■□□□□ 0.15
XRN1-203ENST00000463916 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.96■□□□□ 0.15
XRN1-203ENST00000463916 CSRNP1Q96S65 589 aa15.96■□□□□ 0.15
XRN1-203ENST00000463916 CCDC8Q9H0W5 538 aaPredicted RBP15.96■□□□□ 0.15
XRN1-203ENST00000463916 MAP3K11Q16584 847 aa15.96■□□□□ 0.15
XRN1-203ENST00000463916 ZGPATQ8N5A5 531 aaKnown RBP15.96■□□□□ 0.15
XRN1-203ENST00000463916 CLMNQ96JQ2 1002 aa15.96■□□□□ 0.15
XRN1-203ENST00000463916 SNRKQ9NRH2 765 aa15.96■□□□□ 0.15
XRN1-203ENST00000463916 PPP1R12BO60237 982 aaPredicted RBP15.95■□□□□ 0.14
XRN1-203ENST00000463916 MKRN3Q13064 507 aaKnown RBP15.95■□□□□ 0.14
XRN1-203ENST00000463916 BEGAINQ9BUH8 593 aa15.95■□□□□ 0.14
XRN1-203ENST00000463916 TNNI2P48788 182 aa15.95■□□□□ 0.14
XRN1-203ENST00000463916 MECOMQ03112 1051 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms