RNA–Protein interactions for RNA: ENST00000463601.1

TSC2-209, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-209ENST00000463601 FRAT2O75474 233 aaPredicted RBP24.08■■□□□ 1.45
TSC2-209ENST00000463601 TRIM27P14373 513 aa24.08■■□□□ 1.45
TSC2-209ENST00000463601 PUM3Q15397 648 aaKnown RBP24.08■■□□□ 1.45
TSC2-209ENST00000463601 MAP3K11Q16584 847 aa24.08■■□□□ 1.45
TSC2-209ENST00000463601 SPRYD7Q5W111 196 aa24.08■■□□□ 1.45
TSC2-209ENST00000463601 ATF7IPQ6VMQ6 1270 aa24.08■■□□□ 1.45
TSC2-209ENST00000463601 SIL1Q9H173 461 aa24.08■■□□□ 1.45
TSC2-209ENST00000463601 OTOFQ9HC10 1997 aa24.07■■□□□ 1.44
TSC2-209ENST00000463601 PPP1R12BO60237 982 aaPredicted RBP24.07■■□□□ 1.44
TSC2-209ENST00000463601 SUPT20HL1Q3ZLR7 823 aa24.07■■□□□ 1.44
TSC2-209ENST00000463601 INTS3Q68E01 1043 aaKnown RBP24.07■■□□□ 1.44
TSC2-209ENST00000463601 FRAT1Q92837 279 aaPredicted RBP24.07■■□□□ 1.44
TSC2-209ENST00000463601 LRRFIP2Q9Y608 721 aaKnown RBP24.07■■□□□ 1.44
TSC2-209ENST00000463601 USP2O75604 605 aaPredicted RBP24.06■■□□□ 1.44
TSC2-209ENST00000463601 IFIT1P09914 478 aaKnown RBP24.06■■□□□ 1.44
TSC2-209ENST00000463601 SLC10A4Q96EP9 437 aa24.06■■□□□ 1.44
TSC2-209ENST00000463601 MEIS3Q99687 375 aa24.06■■□□□ 1.44
TSC2-209ENST00000463601 TCP10L2B9ZVM9 353 aa24.05■■□□□ 1.44
TSC2-209ENST00000463601 TBC1D22AQ8WUA7 517 aa24.05■■□□□ 1.44
TSC2-209ENST00000463601 TEPSINQ96N21 525 aa24.05■■□□□ 1.44
TSC2-209ENST00000463601 R3HDMLQ9H3Y0 253 aa24.05■■□□□ 1.44
TSC2-209ENST00000463601 TNNQ9UQP3 1299 aa24.05■■□□□ 1.44
TSC2-209ENST00000463601 WNK4Q96J92 1243 aa24.04■■□□□ 1.44
TSC2-209ENST00000463601 TMEM39BQ9GZU3 492 aa24.04■■□□□ 1.44
TSC2-209ENST00000463601 PA2G4Q9UQ80 394 aaKnown RBP24.04■■□□□ 1.44
TSC2-209ENST00000463601 LAMB1P07942 1786 aa24.03■■□□□ 1.44
TSC2-209ENST00000463601 SLC5A1P13866 664 aa24.03■■□□□ 1.44
TSC2-209ENST00000463601 CACNB3P54284 484 aa24.03■■□□□ 1.44
TSC2-209ENST00000463601 SREBF2Q12772 1141 aa24.03■■□□□ 1.44
TSC2-209ENST00000463601 TNFAIP1Q13829 316 aa24.03■■□□□ 1.44
TSC2-209ENST00000463601 ZKSCAN2Q63HK3 967 aa24.03■■□□□ 1.44
TSC2-209ENST00000463601 ZNF296Q8WUU4 475 aaPredicted RBP24.03■■□□□ 1.44
TSC2-209ENST00000463601 LPIN2Q92539 896 aa24.03■■□□□ 1.44
TSC2-209ENST00000463601 HDLBPQ00341 1268 aaKnown RBP24.02■■□□□ 1.44
TSC2-209ENST00000463601 CIAO1O76071 339 aa24.01■■□□□ 1.43
TSC2-209ENST00000463601 GJA5P36382 358 aa24.01■■□□□ 1.43
TSC2-209ENST00000463601 IREB2P48200 963 aaKnown RBP24.01■■□□□ 1.43
TSC2-209ENST00000463601 CTU1Q7Z7A3 348 aaKnown RBP24.01■■□□□ 1.43
TSC2-209ENST00000463601 TEKT1Q969V4 418 aa24.01■■□□□ 1.43
TSC2-209ENST00000463601 ATP2B3Q16720 1220 aa24■■□□□ 1.43
TSC2-209ENST00000463601 CLUAP1Q96AJ1 413 aa24■■□□□ 1.43
TSC2-209ENST00000463601 GPR25O00155 361 aa23.99■■□□□ 1.43
TSC2-209ENST00000463601 ZBTB48P10074 688 aaPredicted RBP23.99■■□□□ 1.43
TSC2-209ENST00000463601 APOBEC3HQ6NTF7 200 aaKnown RBP23.99■■□□□ 1.43
TSC2-209ENST00000463601 ZDHHC15Q96MV8 337 aa23.99■■□□□ 1.43
TSC2-209ENST00000463601 CEP126Q9P2H0 1117 aa23.99■■□□□ 1.43
TSC2-209ENST00000463601 FBXO3Q9UK99 471 aa23.99■■□□□ 1.43
TSC2-209ENST00000463601 MANSC4A6NHS7 340 aaPredicted RBP23.98■■□□□ 1.43
TSC2-209ENST00000463601 UNCXA6NJT0 531 aa23.98■■□□□ 1.43
TSC2-209ENST00000463601 IGF2BP3O00425 579 aaKnown RBP eCLIP23.98■■□□□ 1.43
TSC2-209ENST00000463601 IFNL1Q8IU54 200 aa23.98■■□□□ 1.43
TSC2-209ENST00000463601 ANKRD13AQ8IZ07 590 aa23.98■■□□□ 1.43
TSC2-209ENST00000463601 ELP3Q9H9T3 547 aa23.98■■□□□ 1.43
TSC2-209ENST00000463601 IL15P40933 162 aaPredicted RBP23.97■■□□□ 1.43
TSC2-209ENST00000463601 TNNI2P48788 182 aa23.97■■□□□ 1.43
TSC2-209ENST00000463601 RGS19P49795 217 aa23.97■■□□□ 1.43
TSC2-209ENST00000463601 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.97■■□□□ 1.43
TSC2-209ENST00000463601 CNKSR2Q8WXI2 1034 aa23.97■■□□□ 1.43
TSC2-209ENST00000463601 MRIQ9BWK5 157 aa23.97■■□□□ 1.43
TSC2-209ENST00000463601 CFHR5Q9BXR6 569 aa23.97■■□□□ 1.43
TSC2-209ENST00000463601 COPRSQ9NQ92 184 aa23.97■■□□□ 1.43
TSC2-209ENST00000463601 ADORA1P30542 326 aa23.96■■□□□ 1.43
TSC2-209ENST00000463601 PHKA1P46020 1223 aa23.96■■□□□ 1.43
TSC2-209ENST00000463601 TMEM57Q8N5G2 664 aa23.96■■□□□ 1.43
TSC2-209ENST00000463601 WDR66Q8TBY9 1149 aa23.96■■□□□ 1.43
TSC2-209ENST00000463601 HDAC5Q9UQL6 1122 aa23.96■■□□□ 1.43
TSC2-209ENST00000463601 SUGT1Q9Y2Z0 365 aa23.96■■□□□ 1.43
TSC2-209ENST00000463601 HHIPL2Q6UWX4 724 aa23.95■■□□□ 1.42
TSC2-209ENST00000463601 MAST3O60307 1309 aa23.94■■□□□ 1.42
TSC2-209ENST00000463601 GNAI3P08754 354 aa23.94■■□□□ 1.42
TSC2-209ENST00000463601 INHBEP58166 350 aa23.94■■□□□ 1.42
TSC2-209ENST00000463601 DIXDC1Q155Q3 683 aa23.94■■□□□ 1.42
TSC2-209ENST00000463601 NOM1Q5C9Z4 860 aaKnown RBP23.94■■□□□ 1.42
TSC2-209ENST00000463601 OPTNQ96CV9 577 aa23.94■■□□□ 1.42
TSC2-209ENST00000463601 SRGAP3O43295 1099 aa23.93■■□□□ 1.42
TSC2-209ENST00000463601 ALDH1A1P00352 501 aa23.93■■□□□ 1.42
TSC2-209ENST00000463601 RLBP1P12271 317 aa23.93■■□□□ 1.42
TSC2-209ENST00000463601 PRDX5P30044 214 aa23.93■■□□□ 1.42
TSC2-209ENST00000463601 MLLT1Q03111 559 aaPredicted RBP23.93■■□□□ 1.42
TSC2-209ENST00000463601 VGLL4Q14135 290 aa23.93■■□□□ 1.42
TSC2-209ENST00000463601 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.93■■□□□ 1.42
TSC2-209ENST00000463601 PTPN18Q99952 460 aa23.93■■□□□ 1.42
TSC2-209ENST00000463601 RCAN3Q9UKA8 241 aa23.93■■□□□ 1.42
TSC2-209ENST00000463601 DAGLAQ9Y4D2 1042 aa23.93■■□□□ 1.42
TSC2-209ENST00000463601 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.93■■□□□ 1.42
TSC2-209ENST00000463601 TNRC18O15417 2968 aaPredicted RBP23.92■■□□□ 1.42
TSC2-209ENST00000463601 FKTNO75072 461 aa23.92■■□□□ 1.42
TSC2-209ENST00000463601 SOX10P56693 466 aa23.92■■□□□ 1.42
TSC2-209ENST00000463601 TIMM10P62072 90 aa23.92■■□□□ 1.42
TSC2-209ENST00000463601 MAP3K9P80192 1104 aa23.92■■□□□ 1.42
TSC2-209ENST00000463601 FTSJ3Q8IY81 847 aaKnown RBP23.92■■□□□ 1.42
TSC2-209ENST00000463601 GNL3LQ9NVN8 582 aaKnown RBP23.92■■□□□ 1.42
TSC2-209ENST00000463601 TMOD2Q9NZR1 351 aa23.92■■□□□ 1.42
TSC2-209ENST00000463601 HPS5Q9UPZ3 1129 aa23.92■■□□□ 1.42
TSC2-209ENST00000463601 AK9Q5TCS8 1911 aa23.91■■□□□ 1.42
TSC2-209ENST00000463601 FAM83AQ86UY5 434 aa23.91■■□□□ 1.42
TSC2-209ENST00000463601 MYH2Q9UKX2 1941 aa23.9■■□□□ 1.42
TSC2-209ENST00000463601 TFCP2Q12800 502 aa23.9■■□□□ 1.42
TSC2-209ENST00000463601 MTX1Q13505 466 aa23.9■■□□□ 1.42
TSC2-209ENST00000463601 FKBP1CQ5VVH2 108 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms