RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 A0A1B0GUL6 1792 aa19.29■□□□□ 0.68
CMSS1-202ENST00000463526 FBXO33Q7Z6M2 555 aa19.28■□□□□ 0.68
CMSS1-202ENST00000463526 MRPL50Q8N5N7 158 aaKnown RBP19.28■□□□□ 0.68
CMSS1-202ENST00000463526 KLHDC4Q8TBB5 520 aa19.28■□□□□ 0.68
CMSS1-202ENST00000463526 CD99L2Q8TCZ2 262 aa19.28■□□□□ 0.68
CMSS1-202ENST00000463526 CNKSR2Q8WXI2 1034 aa19.28■□□□□ 0.68
CMSS1-202ENST00000463526 OPTNQ96CV9 577 aa19.28■□□□□ 0.68
CMSS1-202ENST00000463526 PTPN18Q99952 460 aa19.28■□□□□ 0.68
CMSS1-202ENST00000463526 CACNB3P54284 484 aa19.27■□□□□ 0.68
CMSS1-202ENST00000463526 CAVIN4Q5BKX8 364 aa19.27■□□□□ 0.68
CMSS1-202ENST00000463526 ANKRD44Q8N8A2 993 aa19.27■□□□□ 0.68
CMSS1-202ENST00000463526 TEPSINQ96N21 525 aa19.27■□□□□ 0.68
CMSS1-202ENST00000463526 TNNI2P48788 182 aa19.26■□□□□ 0.67
CMSS1-202ENST00000463526 BCAMP50895 628 aa19.26■□□□□ 0.67
CMSS1-202ENST00000463526 PRPF38BQ5VTL8 546 aaKnown RBP19.26■□□□□ 0.67
CMSS1-202ENST00000463526 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.26■□□□□ 0.67
CMSS1-202ENST00000463526 ERO1AQ96HE7 468 aa19.26■□□□□ 0.67
CMSS1-202ENST00000463526 UTYO14607 1347 aa19.25■□□□□ 0.67
CMSS1-202ENST00000463526 MAP3K9P80192 1104 aa19.25■□□□□ 0.67
CMSS1-202ENST00000463526 RABL6Q3YEC7 729 aaPredicted RBP19.25■□□□□ 0.67
CMSS1-202ENST00000463526 ECM29Q5VYK3 1845 aa19.24■□□□□ 0.67
CMSS1-202ENST00000463526 PDE8BO95263 885 aa19.24■□□□□ 0.67
CMSS1-202ENST00000463526 ZEB1P37275 1124 aaPredicted RBP19.24■□□□□ 0.67
CMSS1-202ENST00000463526 SP3Q02447 781 aa19.24■□□□□ 0.67
CMSS1-202ENST00000463526 VGLL4Q14135 290 aa19.24■□□□□ 0.67
CMSS1-202ENST00000463526 EFCC1Q9HA90 598 aa19.24■□□□□ 0.67
CMSS1-202ENST00000463526 CCL15-CCL14A0A0B4J2E2 113 aa19.23■□□□□ 0.67
CMSS1-202ENST00000463526 TESPA1A2RU30 521 aaPredicted RBP19.23■□□□□ 0.67
CMSS1-202ENST00000463526 CCL15Q16663 113 aa19.23■□□□□ 0.67
CMSS1-202ENST00000463526 TBC1D22AQ8WUA7 517 aa19.23■□□□□ 0.67
CMSS1-202ENST00000463526 BRI3BPQ8WY22 251 aa19.23■□□□□ 0.67
CMSS1-202ENST00000463526 TEKT1Q969V4 418 aa19.23■□□□□ 0.67
CMSS1-202ENST00000463526 OTUD5Q96G74 571 aa19.23■□□□□ 0.67
CMSS1-202ENST00000463526 MS4A4AQ96JQ5 239 aa19.23■□□□□ 0.67
CMSS1-202ENST00000463526 PTPN22Q9Y2R2 807 aa19.23■□□□□ 0.67
CMSS1-202ENST00000463526 CSADQ9Y600 493 aa19.23■□□□□ 0.67
CMSS1-202ENST00000463526 ZNF521Q96K83 1311 aa19.23■□□□□ 0.67
CMSS1-202ENST00000463526 POTEFA5A3E0 1075 aa19.22■□□□□ 0.67
CMSS1-202ENST00000463526 CAP1Q01518 475 aa19.22■□□□□ 0.67
CMSS1-202ENST00000463526 TAF1CQ15572 869 aaPredicted RBP19.22■□□□□ 0.67
CMSS1-202ENST00000463526 VGLL2Q8N8G2 317 aa19.22■□□□□ 0.67
CMSS1-202ENST00000463526 SSH1Q8WYL5 1049 aa19.22■□□□□ 0.67
CMSS1-202ENST00000463526 GTF2A2P52657 109 aa19.21■□□□□ 0.67
CMSS1-202ENST00000463526 HDLBPQ00341 1268 aaKnown RBP19.21■□□□□ 0.67
CMSS1-202ENST00000463526 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.21■□□□□ 0.67
CMSS1-202ENST00000463526 USP44Q9H0E7 712 aa19.21■□□□□ 0.67
CMSS1-202ENST00000463526 TMOD2Q9NZR1 351 aa19.21■□□□□ 0.67
CMSS1-202ENST00000463526 PTPRCP08575 1304 aa19.21■□□□□ 0.67
CMSS1-202ENST00000463526 IFIT1P09914 478 aaKnown RBP19.2■□□□□ 0.66
CMSS1-202ENST00000463526 INTS3Q68E01 1043 aaKnown RBP19.2■□□□□ 0.66
CMSS1-202ENST00000463526 ZFYVE28Q9HCC9 887 aa19.2■□□□□ 0.66
CMSS1-202ENST00000463526 PUM3Q15397 648 aaKnown RBP19.19■□□□□ 0.66
CMSS1-202ENST00000463526 APOBEC3HQ6NTF7 200 aaKnown RBP19.19■□□□□ 0.66
CMSS1-202ENST00000463526 FAM43AQ8N2R8 423 aa19.19■□□□□ 0.66
CMSS1-202ENST00000463526 ZKSCAN4Q969J2 545 aaPredicted RBP19.19■□□□□ 0.66
CMSS1-202ENST00000463526 WRNIP1Q96S55 665 aa19.19■□□□□ 0.66
CMSS1-202ENST00000463526 E9PSI1 815 aa19.18■□□□□ 0.66
CMSS1-202ENST00000463526 ZDHHC15Q96MV8 337 aa19.18■□□□□ 0.66
CMSS1-202ENST00000463526 EYA2O00167 538 aa19.17■□□□□ 0.66
CMSS1-202ENST00000463526 ECM2O94769 699 aaPredicted RBP19.17■□□□□ 0.66
CMSS1-202ENST00000463526 SLC5A1P13866 664 aa19.17■□□□□ 0.66
CMSS1-202ENST00000463526 FGFR2P21802 821 aa19.17■□□□□ 0.66
CMSS1-202ENST00000463526 MIGA2Q7L4E1 593 aa19.17■□□□□ 0.66
CMSS1-202ENST00000463526 SNCAIPQ9Y6H5 919 aa19.17■□□□□ 0.66
CMSS1-202ENST00000463526 OTOFQ9HC10 1997 aa19.16■□□□□ 0.66
CMSS1-202ENST00000463526 SPDYE5A6NIY4 337 aa19.16■□□□□ 0.66
CMSS1-202ENST00000463526 EN2P19622 333 aaPredicted RBP19.16■□□□□ 0.66
CMSS1-202ENST00000463526 RFX5P48382 616 aaPredicted RBP19.16■□□□□ 0.66
CMSS1-202ENST00000463526 MRIQ9BWK5 157 aa19.16■□□□□ 0.66
CMSS1-202ENST00000463526 SIL1Q9H173 461 aa19.16■□□□□ 0.66
CMSS1-202ENST00000463526 MAST3O60307 1309 aa19.16■□□□□ 0.66
CMSS1-202ENST00000463526 MYCP01106 439 aaPredicted RBP19.15■□□□□ 0.66
CMSS1-202ENST00000463526 CETPP11597 493 aa19.15■□□□□ 0.66
CMSS1-202ENST00000463526 SLFN5Q08AF3 891 aa19.15■□□□□ 0.66
CMSS1-202ENST00000463526 HHIPL2Q6UWX4 724 aa19.15■□□□□ 0.66
CMSS1-202ENST00000463526 FAM83AQ86UY5 434 aa19.15■□□□□ 0.66
CMSS1-202ENST00000463526 ERO1BQ86YB8 467 aa19.15■□□□□ 0.66
CMSS1-202ENST00000463526 LPIN2Q92539 896 aa19.15■□□□□ 0.66
CMSS1-202ENST00000463526 ARMC5Q96C12 935 aa19.15■□□□□ 0.66
CMSS1-202ENST00000463526 CDCA7LQ96GN5 454 aa19.15■□□□□ 0.66
CMSS1-202ENST00000463526 SMC4Q9NTJ3 1288 aa19.15■□□□□ 0.66
CMSS1-202ENST00000463526 SUGT1Q9Y2Z0 365 aa19.15■□□□□ 0.66
CMSS1-202ENST00000463526 PTCH2Q9Y6C5 1203 aa19.15■□□□□ 0.66
CMSS1-202ENST00000463526 BTBD19C9JJ37 291 aa19.14■□□□□ 0.65
CMSS1-202ENST00000463526 IRF6O14896 467 aa19.14■□□□□ 0.65
CMSS1-202ENST00000463526 WDHD1O75717 1129 aaPredicted RBP19.14■□□□□ 0.65
CMSS1-202ENST00000463526 TCP10Q12799 353 aa19.14■□□□□ 0.65
CMSS1-202ENST00000463526 ARHGEF6Q15052 776 aa19.14■□□□□ 0.65
CMSS1-202ENST00000463526 DCAF15Q66K64 600 aa19.14■□□□□ 0.65
CMSS1-202ENST00000463526 WDR66Q8TBY9 1149 aa19.14■□□□□ 0.65
CMSS1-202ENST00000463526 HOOK2Q96ED9 719 aa19.14■□□□□ 0.65
CMSS1-202ENST00000463526 TMEM106CQ9BVX2 250 aa19.14■□□□□ 0.65
CMSS1-202ENST00000463526 KIAA0100Q14667 2235 aaKnown RBP19.14■□□□□ 0.65
CMSS1-202ENST00000463526 INPP5BP32019 993 aa19.13■□□□□ 0.65
CMSS1-202ENST00000463526 SNAPC2Q13487 334 aa19.13■□□□□ 0.65
CMSS1-202ENST00000463526 DIXDC1Q155Q3 683 aa19.13■□□□□ 0.65
CMSS1-202ENST00000463526 FKBP1CQ5VVH2 108 aa19.13■□□□□ 0.65
CMSS1-202ENST00000463526 ATG9AQ7Z3C6 839 aa19.13■□□□□ 0.65
CMSS1-202ENST00000463526 ZNF341Q9BYN7 854 aa19.13■□□□□ 0.65
CMSS1-202ENST00000463526 ARHGAP39Q9C0H5 1083 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms