RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 POTEJP0CG39 1038 aa24.14■■□□□ 1.45
COL9A3-204ENST00000463487 SCARF1Q14162 830 aa24.14■■□□□ 1.45
COL9A3-204ENST00000463487 CFAP100Q494V2 611 aa24.14■■□□□ 1.45
COL9A3-204ENST00000463487 LRP2BPQ9P2M1 347 aa24.14■■□□□ 1.45
COL9A3-204ENST00000463487 PRDX5P30044 214 aa24.13■■□□□ 1.45
COL9A3-204ENST00000463487 CRKP46108 304 aa24.13■■□□□ 1.45
COL9A3-204ENST00000463487 HIRAP54198 1017 aaPredicted RBP24.13■■□□□ 1.45
COL9A3-204ENST00000463487 TTF1Q15361 905 aaPredicted RBP24.13■■□□□ 1.45
COL9A3-204ENST00000463487 PI16Q6UXB8 463 aa24.13■■□□□ 1.45
COL9A3-204ENST00000463487 SNRKQ9NRH2 765 aa24.13■■□□□ 1.45
COL9A3-204ENST00000463487 ECHDC1Q9NTX5 307 aa24.13■■□□□ 1.45
COL9A3-204ENST00000463487 WNT10BO00744 389 aa24.12■■□□□ 1.45
COL9A3-204ENST00000463487 EGFRP00533 1210 aa24.12■■□□□ 1.45
COL9A3-204ENST00000463487 ATP5JP18859 108 aa24.12■■□□□ 1.45
COL9A3-204ENST00000463487 GSTO1P78417 241 aa24.12■■□□□ 1.45
COL9A3-204ENST00000463487 GGA3Q9NZ52 723 aa24.12■■□□□ 1.45
COL9A3-204ENST00000463487 PGAP2Q9UHJ9 254 aa24.12■■□□□ 1.45
COL9A3-204ENST00000463487 PITPNM2Q9BZ72 1349 aa24.11■■□□□ 1.45
COL9A3-204ENST00000463487 SPDYE2BA6NHP3 402 aa24.11■■□□□ 1.45
COL9A3-204ENST00000463487 ERC2O15083 957 aa24.11■■□□□ 1.45
COL9A3-204ENST00000463487 SPDYE6P0CI01 402 aa24.11■■□□□ 1.45
COL9A3-204ENST00000463487 ZAP70P43403 619 aa24.11■■□□□ 1.45
COL9A3-204ENST00000463487 MAP1SQ66K74 1059 aaPredicted RBP24.11■■□□□ 1.45
COL9A3-204ENST00000463487 HHIPL2Q6UWX4 724 aa24.11■■□□□ 1.45
COL9A3-204ENST00000463487 SULF1Q8IWU6 871 aa24.11■■□□□ 1.45
COL9A3-204ENST00000463487 CNTROBQ8N137 903 aa24.11■■□□□ 1.45
COL9A3-204ENST00000463487 RAI14Q9P0K7 980 aa24.11■■□□□ 1.45
COL9A3-204ENST00000463487 TTC41PQ6P2S7 1318 aa24.1■■□□□ 1.45
COL9A3-204ENST00000463487 C1QTNF8P60827 252 aa24.1■■□□□ 1.45
COL9A3-204ENST00000463487 GRIK5Q16478 980 aa24.1■■□□□ 1.45
COL9A3-204ENST00000463487 CDC37L1Q7L3B6 337 aa24.1■■□□□ 1.45
COL9A3-204ENST00000463487 ZDHHC15Q96MV8 337 aa24.1■■□□□ 1.45
COL9A3-204ENST00000463487 AKAP11Q9UKA4 1901 aa24.1■■□□□ 1.45
COL9A3-204ENST00000463487 LDHCP07864 332 aa24.09■■□□□ 1.45
COL9A3-204ENST00000463487 NBPF9Q3BBW0 867 aa24.09■■□□□ 1.45
COL9A3-204ENST00000463487 ANGEL2Q5VTE6 544 aaKnown RBP24.09■■□□□ 1.45
COL9A3-204ENST00000463487 B4GALNT3Q6L9W6 998 aa24.09■■□□□ 1.45
COL9A3-204ENST00000463487 TMED8Q6PL24 325 aaPredicted RBP24.09■■□□□ 1.45
COL9A3-204ENST00000463487 APOBEC3FQ8IUX4 373 aaKnown RBP24.09■■□□□ 1.45
COL9A3-204ENST00000463487 DNAJC2Q99543 621 aaKnown RBP24.09■■□□□ 1.45
COL9A3-204ENST00000463487 CYP2E1P05181 493 aaPredicted RBP24.08■■□□□ 1.45
COL9A3-204ENST00000463487 TBC1D9Q6ZT07 1266 aa24.08■■□□□ 1.45
COL9A3-204ENST00000463487 KRT26Q7Z3Y9 468 aa24.08■■□□□ 1.45
COL9A3-204ENST00000463487 CHD1LQ86WJ1 897 aa24.08■■□□□ 1.45
COL9A3-204ENST00000463487 BOLA2Q9H3K6 86 aa24.08■■□□□ 1.45
COL9A3-204ENST00000463487 TMOD2Q9NZR1 351 aa24.08■■□□□ 1.45
COL9A3-204ENST00000463487 MX1P20591 662 aa24.07■■□□□ 1.44
COL9A3-204ENST00000463487 NUCB1Q02818 461 aa24.07■■□□□ 1.44
COL9A3-204ENST00000463487 MECOMQ03112 1051 aa24.07■■□□□ 1.44
COL9A3-204ENST00000463487 MAP3K12Q12852 859 aa24.07■■□□□ 1.44
COL9A3-204ENST00000463487 ZBED3Q96IU2 234 aaPredicted RBP24.07■■□□□ 1.44
COL9A3-204ENST00000463487 NOL10Q9BSC4 688 aaKnown RBP24.07■■□□□ 1.44
COL9A3-204ENST00000463487 LNPKQ9C0E8 428 aa24.07■■□□□ 1.44
COL9A3-204ENST00000463487 IDH1O75874 414 aaKnown RBP24.06■■□□□ 1.44
COL9A3-204ENST00000463487 TNFAIP1Q13829 316 aa24.06■■□□□ 1.44
COL9A3-204ENST00000463487 PRMT6Q96LA8 375 aaPredicted RBP24.06■■□□□ 1.44
COL9A3-204ENST00000463487 HAUS7Q99871 368 aa24.06■■□□□ 1.44
COL9A3-204ENST00000463487 ECM29Q5VYK3 1845 aa24.05■■□□□ 1.44
COL9A3-204ENST00000463487 GLRX3O76003 335 aaKnown RBP24.05■■□□□ 1.44
COL9A3-204ENST00000463487 DIXDC1Q155Q3 683 aa24.05■■□□□ 1.44
COL9A3-204ENST00000463487 ERICH6BQ5W0A0 696 aa24.05■■□□□ 1.44
COL9A3-204ENST00000463487 NAA16Q6N069 864 aaPredicted RBP24.05■■□□□ 1.44
COL9A3-204ENST00000463487 PAG1Q9NWQ8 432 aa24.05■■□□□ 1.44
COL9A3-204ENST00000463487 MAST2Q6P0Q8 1798 aa24.04■■□□□ 1.44
COL9A3-204ENST00000463487 GOLIM4O00461 696 aa24.04■■□□□ 1.44
COL9A3-204ENST00000463487 NSUN4Q96CB9 384 aaKnown RBP24.04■■□□□ 1.44
COL9A3-204ENST00000463487 FAM163AQ96GL9 167 aaPredicted RBP24.04■■□□□ 1.44
COL9A3-204ENST00000463487 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.04■■□□□ 1.44
COL9A3-204ENST00000463487 VEZTQ9HBM0 779 aa24.04■■□□□ 1.44
COL9A3-204ENST00000463487 DAGLAQ9Y4D2 1042 aa24.04■■□□□ 1.44
COL9A3-204ENST00000463487 MROH7-TTC4A0A0A0MT08 1334 aa24.04■■□□□ 1.44
COL9A3-204ENST00000463487 TNNI2P48788 182 aa24.03■■□□□ 1.44
COL9A3-204ENST00000463487 SPDYE2Q495Y8 402 aa24.03■■□□□ 1.44
COL9A3-204ENST00000463487 GLIS2Q9BZE0 524 aaPredicted RBP24.03■■□□□ 1.44
COL9A3-204ENST00000463487 PIH1D3Q9NQM4 214 aaKnown RBP24.03■■□□□ 1.44
COL9A3-204ENST00000463487 PPP2R3BQ9Y5P8 575 aa24.03■■□□□ 1.44
COL9A3-204ENST00000463487 MYH2Q9UKX2 1941 aa24.03■■□□□ 1.44
COL9A3-204ENST00000463487 GAKO14976 1311 aa24.03■■□□□ 1.44
COL9A3-204ENST00000463487 CLRN2A0PK11 232 aa24.02■■□□□ 1.44
COL9A3-204ENST00000463487 ITGBL1O95965 494 aaPredicted RBP24.02■■□□□ 1.44
COL9A3-204ENST00000463487 CENPQQ7L2Z9 268 aaPredicted RBP24.02■■□□□ 1.44
COL9A3-204ENST00000463487 USP48Q86UV5 1035 aa24.02■■□□□ 1.44
COL9A3-204ENST00000463487 CCDC136Q96JN2 1154 aa24.02■■□□□ 1.44
COL9A3-204ENST00000463487 TDRD3Q9H7E2 651 aaKnown RBP24.02■■□□□ 1.44
COL9A3-204ENST00000463487 PCDHAC2Q9Y5I4 1007 aa24.02■■□□□ 1.44
COL9A3-204ENST00000463487 NDUFB9Q9Y6M9 179 aa24.02■■□□□ 1.44
COL9A3-204ENST00000463487 ASTN2O75129 1339 aaPredicted RBP24.02■■□□□ 1.44
COL9A3-204ENST00000463487 BAG3O95817 575 aa24.01■■□□□ 1.43
COL9A3-204ENST00000463487 LRRFIP1Q32MZ4 808 aaKnown RBP24.01■■□□□ 1.43
COL9A3-204ENST00000463487 APOBEC3HQ6NTF7 200 aaKnown RBP24.01■■□□□ 1.43
COL9A3-204ENST00000463487 CERS3Q8IU89 383 aa24.01■■□□□ 1.43
COL9A3-204ENST00000463487 ANTXR1Q9H6X2 564 aa24.01■■□□□ 1.43
COL9A3-204ENST00000463487 ZNF70Q9UC06 446 aaPredicted RBP24.01■■□□□ 1.43
COL9A3-204ENST00000463487 MAP4K4O95819 1239 aaPredicted RBP24■■□□□ 1.43
COL9A3-204ENST00000463487 ZSCAN25Q6NSZ9 544 aa24■■□□□ 1.43
COL9A3-204ENST00000463487 OTUD7AQ8TE49 926 aaPredicted RBP24■■□□□ 1.43
COL9A3-204ENST00000463487 STAP2Q9UGK3 403 aa24■■□□□ 1.43
COL9A3-204ENST00000463487 AOX1Q06278 1338 aa24■■□□□ 1.43
COL9A3-204ENST00000463487 PASKQ96RG2 1323 aa24■■□□□ 1.43
COL9A3-204ENST00000463487 SALL3Q9BXA9 1300 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms