RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 ZNF512BQ96KM6 892 aaPredicted RBP21.77■■□□□ 1.08
VPS52-214ENST00000463486 DCTPP1Q9H773 170 aa21.77■■□□□ 1.08
VPS52-214ENST00000463486 IL1RAPL2Q9NP60 686 aa21.77■■□□□ 1.08
VPS52-214ENST00000463486 SCAF8Q9UPN6 1271 aaKnown RBP21.77■■□□□ 1.08
VPS52-214ENST00000463486 PRDX5P30044 214 aa21.76■■□□□ 1.07
VPS52-214ENST00000463486 CRKP46108 304 aa21.76■■□□□ 1.07
VPS52-214ENST00000463486 KIF1BPQ96EK5 621 aa21.76■■□□□ 1.07
VPS52-214ENST00000463486 PCNTO95613 3336 aa21.75■■□□□ 1.07
VPS52-214ENST00000463486 GORABQ5T7V8 394 aa21.75■■□□□ 1.07
VPS52-214ENST00000463486 SPATA5Q8NB90 893 aa21.75■■□□□ 1.07
VPS52-214ENST00000463486 AKAP11Q9UKA4 1901 aa21.74■■□□□ 1.07
VPS52-214ENST00000463486 APBB1O00213 710 aa21.74■■□□□ 1.07
VPS52-214ENST00000463486 UQCRFS1P1P0C7P4 283 aa21.74■■□□□ 1.07
VPS52-214ENST00000463486 APOBEC3HQ6NTF7 200 aaKnown RBP21.74■■□□□ 1.07
VPS52-214ENST00000463486 HHIPL2Q6UWX4 724 aa21.74■■□□□ 1.07
VPS52-214ENST00000463486 SULF1Q8IWU6 871 aa21.74■■□□□ 1.07
VPS52-214ENST00000463486 ZNF384Q8TF68 577 aa21.74■■□□□ 1.07
VPS52-214ENST00000463486 ZDHHC15Q96MV8 337 aa21.74■■□□□ 1.07
VPS52-214ENST00000463486 TRPM7Q96QT4 1865 aa21.74■■□□□ 1.07
VPS52-214ENST00000463486 AACSQ86V21 672 aa21.73■■□□□ 1.07
VPS52-214ENST00000463486 CELF2O95319 508 aaKnown RBP21.72■■□□□ 1.07
VPS52-214ENST00000463486 LDHBP07195 334 aaKnown RBP21.72■■□□□ 1.07
VPS52-214ENST00000463486 DIXDC1Q155Q3 683 aa21.72■■□□□ 1.07
VPS52-214ENST00000463486 SPDYE2Q495Y8 402 aa21.72■■□□□ 1.07
VPS52-214ENST00000463486 CCDC158Q5M9N0 1113 aa21.72■■□□□ 1.07
VPS52-214ENST00000463486 TBC1D9Q6ZT07 1266 aa21.72■■□□□ 1.07
VPS52-214ENST00000463486 EXOC6Q8TAG9 804 aa21.72■■□□□ 1.07
VPS52-214ENST00000463486 TEKT1Q969V4 418 aa21.72■■□□□ 1.07
VPS52-214ENST00000463486 CDCA5Q96FF9 252 aa21.72■■□□□ 1.07
VPS52-214ENST00000463486 CLRN2A0PK11 232 aa21.71■■□□□ 1.07
VPS52-214ENST00000463486 RBM5P52756 815 aaKnown RBP eCLIP21.71■■□□□ 1.07
VPS52-214ENST00000463486 PRAMEF18Q5VWM3 479 aa21.71■■□□□ 1.07
VPS52-214ENST00000463486 TDRD3Q9H7E2 651 aaKnown RBP21.71■■□□□ 1.07
VPS52-214ENST00000463486 SNRKQ9NRH2 765 aa21.71■■□□□ 1.07
VPS52-214ENST00000463486 ZNF70Q9UC06 446 aaPredicted RBP21.71■■□□□ 1.07
VPS52-214ENST00000463486 MAST3O60307 1309 aa21.71■■□□□ 1.07
VPS52-214ENST00000463486 ECM29Q5VYK3 1845 aa21.71■■□□□ 1.07
VPS52-214ENST00000463486 CYP2E1P05181 493 aaPredicted RBP21.7■■□□□ 1.06
VPS52-214ENST00000463486 AAMPQ13685 434 aa21.7■■□□□ 1.06
VPS52-214ENST00000463486 TTC39AQ5SRH9 613 aa21.7■■□□□ 1.06
VPS52-214ENST00000463486 APOBEC3FQ8IUX4 373 aaKnown RBP21.7■■□□□ 1.06
VPS52-214ENST00000463486 CLASRPQ8N2M8 674 aaKnown RBP21.7■■□□□ 1.06
VPS52-214ENST00000463486 DAGLAQ9Y4D2 1042 aa21.7■■□□□ 1.06
VPS52-214ENST00000463486 RASSF10A6NK89 507 aa21.69■■□□□ 1.06
VPS52-214ENST00000463486 SMARCA5O60264 1052 aaPredicted RBP21.69■■□□□ 1.06
VPS52-214ENST00000463486 SAPCD2Q86UD0 394 aa21.69■■□□□ 1.06
VPS52-214ENST00000463486 ZGPATQ8N5A5 531 aaKnown RBP21.69■■□□□ 1.06
VPS52-214ENST00000463486 KLRG1Q96E93 195 aa21.69■■□□□ 1.06
VPS52-214ENST00000463486 FAM163AQ96GL9 167 aaPredicted RBP21.69■■□□□ 1.06
VPS52-214ENST00000463486 LRRCC1Q9C099 1032 aa21.69■■□□□ 1.06
VPS52-214ENST00000463486 DEFB129Q9H1M3 183 aa21.69■■□□□ 1.06
VPS52-214ENST00000463486 ABCF2Q9UG63 623 aa21.69■■□□□ 1.06
VPS52-214ENST00000463486 TLL2Q9Y6L7 1015 aa21.69■■□□□ 1.06
VPS52-214ENST00000463486 ZAP70P43403 619 aa21.68■■□□□ 1.06
VPS52-214ENST00000463486 HDAC1Q13547 482 aaPredicted RBP21.68■■□□□ 1.06
VPS52-214ENST00000463486 GAKO14976 1311 aa21.68■■□□□ 1.06
VPS52-214ENST00000463486 CNTNAP1P78357 1384 aa21.67■■□□□ 1.06
VPS52-214ENST00000463486 MYO1BO43795 1136 aa21.67■■□□□ 1.06
VPS52-214ENST00000463486 MECOMQ03112 1051 aa21.67■■□□□ 1.06
VPS52-214ENST00000463486 SPTY2D1Q68D10 685 aaPredicted RBP21.67■■□□□ 1.06
VPS52-214ENST00000463486 NSUN4Q96CB9 384 aaKnown RBP21.67■■□□□ 1.06
VPS52-214ENST00000463486 ZNF408Q9H9D4 720 aa21.67■■□□□ 1.06
VPS52-214ENST00000463486 PIH1D3Q9NQM4 214 aaKnown RBP21.66■■□□□ 1.06
VPS52-214ENST00000463486 NDUFB9Q9Y6M9 179 aa21.66■■□□□ 1.06
VPS52-214ENST00000463486 IFIT2P09913 472 aaKnown RBP21.65■■□□□ 1.06
VPS52-214ENST00000463486 RASA3Q14644 834 aa21.65■■□□□ 1.06
VPS52-214ENST00000463486 CDC42EP5Q6NZY7 148 aa21.65■■□□□ 1.06
VPS52-214ENST00000463486 ERICH6Q7L0X2 663 aa21.65■■□□□ 1.06
VPS52-214ENST00000463486 TEPSINQ96N21 525 aa21.65■■□□□ 1.06
VPS52-214ENST00000463486 VEZTQ9HBM0 779 aa21.65■■□□□ 1.06
VPS52-214ENST00000463486 GBA2Q9HCG7 927 aaPredicted RBP21.65■■□□□ 1.06
VPS52-214ENST00000463486 MKRN1Q9UHC7 482 aaKnown RBP21.65■■□□□ 1.06
VPS52-214ENST00000463486 CACNB3P54284 484 aa21.64■■□□□ 1.05
VPS52-214ENST00000463486 DEFB115Q30KQ5 88 aa21.64■■□□□ 1.05
VPS52-214ENST00000463486 FKBP1CQ5VVH2 108 aa21.64■■□□□ 1.05
VPS52-214ENST00000463486 CDAN1Q8IWY9 1227 aa21.64■■□□□ 1.05
VPS52-214ENST00000463486 JMYQ8N9B5 988 aa21.64■■□□□ 1.05
VPS52-214ENST00000463486 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.64■■□□□ 1.05
VPS52-214ENST00000463486 ANTXR1Q9H6X2 564 aa21.64■■□□□ 1.05
VPS52-214ENST00000463486 ABT1Q9ULW3 272 aaKnown RBP21.64■■□□□ 1.05
VPS52-214ENST00000463486 PPP2R3BQ9Y5P8 575 aa21.64■■□□□ 1.05
VPS52-214ENST00000463486 SSC5DA1L4H1 1573 aa21.64■■□□□ 1.05
VPS52-214ENST00000463486 VEGFBP49765 207 aa21.63■■□□□ 1.05
VPS52-214ENST00000463486 DZIP1Q86YF9 867 aaKnown RBP21.63■■□□□ 1.05
VPS52-214ENST00000463486 HHIPL1Q96JK4 782 aa21.63■■□□□ 1.05
VPS52-214ENST00000463486 MYH2Q9UKX2 1941 aa21.63■■□□□ 1.05
VPS52-214ENST00000463486 MROH7-TTC4A0A0A0MT08 1334 aa21.62■■□□□ 1.05
VPS52-214ENST00000463486 GPR75-ASB3A0A0A6YYF3 556 aa21.62■■□□□ 1.05
VPS52-214ENST00000463486 TCP10L2B9ZVM9 353 aa21.62■■□□□ 1.05
VPS52-214ENST00000463486 NBPF12Q5TAG4 269 aaPredicted RBP21.62■■□□□ 1.05
VPS52-214ENST00000463486 MOB2Q70IA6 237 aa21.62■■□□□ 1.05
VPS52-214ENST00000463486 MYO5AQ9Y4I1 1855 aaKnown RBP21.62■■□□□ 1.05
VPS52-214ENST00000463486 IGHDP01880 384 aa21.61■■□□□ 1.05
VPS52-214ENST00000463486 ATP5JP18859 108 aa21.61■■□□□ 1.05
VPS52-214ENST00000463486 FKBP1BP68106 108 aa21.61■■□□□ 1.05
VPS52-214ENST00000463486 IRX6P78412 446 aaPredicted RBP21.61■■□□□ 1.05
VPS52-214ENST00000463486 C2orf69Q8N8R5 385 aa21.61■■□□□ 1.05
VPS52-214ENST00000463486 TMEM39BQ9GZU3 492 aa21.61■■□□□ 1.05
VPS52-214ENST00000463486 RAI14Q9P0K7 980 aa21.61■■□□□ 1.05
VPS52-214ENST00000463486 LRP2BPQ9P2M1 347 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms