RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 TNFAIP1Q13829 316 aa17.58■□□□□ 0.4
C9orf3-211ENST00000463372 ANKRD18AQ8IVF6 992 aa17.58■□□□□ 0.4
C9orf3-211ENST00000463372 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.58■□□□□ 0.42e-7■■■■■ 35.1
C9orf3-211ENST00000463372 SPEF2Q9C093 1822 aa17.57■□□□□ 0.4
C9orf3-211ENST00000463372 SPDYE2BA6NHP3 402 aa17.57■□□□□ 0.4
C9orf3-211ENST00000463372 SPDYE6P0CI01 402 aa17.57■□□□□ 0.4
C9orf3-211ENST00000463372 HSP90B1P14625 803 aaKnown RBP17.57■□□□□ 0.4
C9orf3-211ENST00000463372 FLT3LGP49771 235 aa17.57■□□□□ 0.4
C9orf3-211ENST00000463372 EIF4G2P78344 907 aaKnown RBP eCLIP17.57■□□□□ 0.4
C9orf3-211ENST00000463372 CFAP100Q494V2 611 aa17.57■□□□□ 0.4
C9orf3-211ENST00000463372 CCDC152Q4G0S7 254 aa17.57■□□□□ 0.4
C9orf3-211ENST00000463372 ALYREFQ86V81 257 aaKnown RBP17.57■□□□□ 0.4
C9orf3-211ENST00000463372 ERO1BQ86YB8 467 aa17.57■□□□□ 0.4
C9orf3-211ENST00000463372 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.57■□□□□ 0.4
C9orf3-211ENST00000463372 ADAMTS19Q8TE59 1207 aa17.57■□□□□ 0.4
C9orf3-211ENST00000463372 LBHD1Q9BQE6 289 aaPredicted RBP17.57■□□□□ 0.4
C9orf3-211ENST00000463372 PCDHAC2Q9Y5I4 1007 aa17.57■□□□□ 0.4
C9orf3-211ENST00000463372 PDHXO00330 501 aa17.56■□□□□ 0.4
C9orf3-211ENST00000463372 IRF6O14896 467 aa17.56■□□□□ 0.4
C9orf3-211ENST00000463372 PRMT6Q96LA8 375 aaPredicted RBP17.56■□□□□ 0.4
C9orf3-211ENST00000463372 UHRF1Q96T88 793 aaPredicted RBP17.56■□□□□ 0.4
C9orf3-211ENST00000463372 TAOK2Q9UL54 1235 aa17.56■□□□□ 0.4
C9orf3-211ENST00000463372 ATP5J2-PTCD1G3V325 749 aa17.55■□□□□ 0.4
C9orf3-211ENST00000463372 ANKRD23Q86SG2 305 aa17.55■□□□□ 0.4
C9orf3-211ENST00000463372 ATXN2LQ8WWM7 1075 aaKnown RBP17.55■□□□□ 0.4
C9orf3-211ENST00000463372 RBM5P52756 815 aaKnown RBP eCLIP17.54■□□□□ 0.42e-7■■■■□ 26.1
C9orf3-211ENST00000463372 IRF5Q13568 498 aa17.54■□□□□ 0.4
C9orf3-211ENST00000463372 CC2D1BQ5T0F9 858 aaKnown RBP17.54■□□□□ 0.4
C9orf3-211ENST00000463372 IL27Q8NEV9 243 aa17.54■□□□□ 0.4
C9orf3-211ENST00000463372 ISCA1Q9BUE6 129 aa17.54■□□□□ 0.4
C9orf3-211ENST00000463372 TTYH1Q9H313 450 aaPredicted RBP17.54■□□□□ 0.4
C9orf3-211ENST00000463372 DNAH12Q6ZR08 3092 aa17.54■□□□□ 0.4
C9orf3-211ENST00000463372 ARAP2Q8WZ64 1704 aa17.53■□□□□ 0.4
C9orf3-211ENST00000463372 F8W031 263 aaPredicted RBP17.53■□□□□ 0.4
C9orf3-211ENST00000463372 CCT4P50991 539 aaKnown RBP17.53■□□□□ 0.4
C9orf3-211ENST00000463372 PPIL2Q13356 520 aa17.53■□□□□ 0.4
C9orf3-211ENST00000463372 USP38Q8NB14 1042 aa17.53■□□□□ 0.4
C9orf3-211ENST00000463372 NUDCQ9Y266 331 aa17.53■□□□□ 0.4
C9orf3-211ENST00000463372 MYO9BQ13459 2157 aa17.52■□□□□ 0.4
C9orf3-211ENST00000463372 CCDC85AQ96PX6 553 aaPredicted RBP17.52■□□□□ 0.4
C9orf3-211ENST00000463372 ASB2Q96Q27 587 aa17.52■□□□□ 0.4
C9orf3-211ENST00000463372 PARK7Q99497 189 aaKnown RBP17.52■□□□□ 0.4
C9orf3-211ENST00000463372 SNCAIPQ9Y6H5 919 aa17.52■□□□□ 0.4
C9orf3-211ENST00000463372 TNPO2O14787 897 aaKnown RBP17.51■□□□□ 0.39
C9orf3-211ENST00000463372 U2AF1L5P0DN76 240 aaPredicted RBP17.51■□□□□ 0.39
C9orf3-211ENST00000463372 U2AF1Q01081 240 aaKnown RBP eCLIP17.51■□□□□ 0.391e-6■■■■□ 22.3
C9orf3-211ENST00000463372 TXNRD3Q86VQ6 643 aa17.51■□□□□ 0.39
C9orf3-211ENST00000463372 PLBD2Q8NHP8 589 aa17.51■□□□□ 0.39
C9orf3-211ENST00000463372 TCF20Q9UGU0 1960 aaKnown RBP17.51■□□□□ 0.39
C9orf3-211ENST00000463372 AOX1Q06278 1338 aa17.5■□□□□ 0.39
C9orf3-211ENST00000463372 BCRP11274 1271 aa17.5■□□□□ 0.39
C9orf3-211ENST00000463372 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.5■□□□□ 0.39
C9orf3-211ENST00000463372 CFAP53Q96M91 514 aa17.5■□□□□ 0.39
C9orf3-211ENST00000463372 TEPSINQ96N21 525 aa17.5■□□□□ 0.39
C9orf3-211ENST00000463372 PFASO15067 1338 aa17.49■□□□□ 0.39
C9orf3-211ENST00000463372 SMAD3P84022 425 aaKnown RBP17.49■□□□□ 0.39
C9orf3-211ENST00000463372 CDAN1Q8IWY9 1227 aa17.49■□□□□ 0.39
C9orf3-211ENST00000463372 CERS5Q8N5B7 392 aa17.49■□□□□ 0.39
C9orf3-211ENST00000463372 CDC5LQ99459 802 aaKnown RBP17.49■□□□□ 0.39
C9orf3-211ENST00000463372 HMX1Q9NP08 348 aaPredicted RBP17.49■□□□□ 0.39
C9orf3-211ENST00000463372 MINPP1Q9UNW1 487 aa17.49■□□□□ 0.39
C9orf3-211ENST00000463372 TNNI2P48788 182 aa17.48■□□□□ 0.39
C9orf3-211ENST00000463372 ZBTB38Q8NAP3 1195 aaPredicted RBP17.48■□□□□ 0.39
C9orf3-211ENST00000463372 ZKSCAN4Q969J2 545 aaPredicted RBP17.48■□□□□ 0.39
C9orf3-211ENST00000463372 WRNIP1Q96S55 665 aa17.48■□□□□ 0.39
C9orf3-211ENST00000463372 P2RX7Q99572 595 aaKnown RBP17.48■□□□□ 0.39
C9orf3-211ENST00000463372 LRFN3Q9BTN0 628 aa17.48■□□□□ 0.39
C9orf3-211ENST00000463372 THEGQ9P2T0 379 aa17.48■□□□□ 0.39
C9orf3-211ENST00000463372 ZNF70Q9UC06 446 aaPredicted RBP17.48■□□□□ 0.39
C9orf3-211ENST00000463372 LEMD3Q9Y2U8 911 aa17.48■□□□□ 0.39
C9orf3-211ENST00000463372 PDE8AO60658 829 aa17.47■□□□□ 0.39
C9orf3-211ENST00000463372 MRPS5P82675 430 aaKnown RBP17.47■□□□□ 0.39
C9orf3-211ENST00000463372 PPATQ06203 517 aa17.47■□□□□ 0.39
C9orf3-211ENST00000463372 SPDYE2Q495Y8 402 aa17.47■□□□□ 0.39
C9orf3-211ENST00000463372 TMEM39BQ9GZU3 492 aa17.47■□□□□ 0.39
C9orf3-211ENST00000463372 BSDC1Q9NW68 430 aaPredicted RBP17.47■□□□□ 0.39
C9orf3-211ENST00000463372 TSPYL4Q9UJ04 414 aa17.47■□□□□ 0.39
C9orf3-211ENST00000463372 OGDHLQ9ULD0 1010 aa17.47■□□□□ 0.39
C9orf3-211ENST00000463372 TCP10L2B9ZVM9 353 aa17.46■□□□□ 0.39
C9orf3-211ENST00000463372 HMGCRP04035 888 aa17.46■□□□□ 0.39
C9orf3-211ENST00000463372 LRRC26Q2I0M4 334 aa17.46■□□□□ 0.39
C9orf3-211ENST00000463372 COA7Q96BR5 231 aa17.46■□□□□ 0.39
C9orf3-211ENST00000463372 PRKAG2Q9UGJ0 569 aa17.46■□□□□ 0.39
C9orf3-211ENST00000463372 MYH3P11055 1940 aa17.45■□□□□ 0.38
C9orf3-211ENST00000463372 NEFMP07197 916 aa17.45■□□□□ 0.38
C9orf3-211ENST00000463372 CYP2C8P10632 490 aa17.45■□□□□ 0.38
C9orf3-211ENST00000463372 TRIM28Q13263 835 aaKnown RBP17.45■□□□□ 0.38
C9orf3-211ENST00000463372 SHHQ15465 462 aa17.45■□□□□ 0.38
C9orf3-211ENST00000463372 PPM1EQ8WY54 764 aa17.45■□□□□ 0.38
C9orf3-211ENST00000463372 TDRD3Q9H7E2 651 aaKnown RBP17.44■□□□□ 0.38
C9orf3-211ENST00000463372 CD209Q9NNX6 404 aa17.44■□□□□ 0.38
C9orf3-211ENST00000463372 LTBP2Q14767 1821 aa17.44■□□□□ 0.38
C9orf3-211ENST00000463372 AK9Q5TCS8 1911 aa17.43■□□□□ 0.38
C9orf3-211ENST00000463372 KLRK1P26718 216 aa17.43■□□□□ 0.38
C9orf3-211ENST00000463372 CNGB1Q14028 1251 aaPredicted RBP17.43■□□□□ 0.38
C9orf3-211ENST00000463372 COL6A1P12109 1028 aa17.42■□□□□ 0.38
C9orf3-211ENST00000463372 KCNJ4P48050 445 aa17.42■□□□□ 0.38
C9orf3-211ENST00000463372 MRE11P49959 708 aa17.42■□□□□ 0.38
C9orf3-211ENST00000463372 TMEM31Q5JXX7 168 aa17.42■□□□□ 0.38
C9orf3-211ENST00000463372 HOOK2Q96ED9 719 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms