RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 CCZ1P86791 482 aaPredicted RBP14.45□□□□□ -0.1
HDAC4-208ENST00000463007 GNL2Q13823 731 aaKnown RBP14.45□□□□□ -0.1
HDAC4-208ENST00000463007 MCMDC2Q4G0Z9 681 aa14.45□□□□□ -0.1
HDAC4-208ENST00000463007 ANO10Q9NW15 660 aa14.45□□□□□ -0.1
HDAC4-208ENST00000463007 TMOD3Q9NYL9 352 aa14.45□□□□□ -0.1
HDAC4-208ENST00000463007 PCCAP05165 728 aaPredicted RBP14.45□□□□□ -0.1
HDAC4-208ENST00000463007 ZMYM1Q5SVZ6 1142 aa14.45□□□□□ -0.1
HDAC4-208ENST00000463007 NSUN7Q8NE18 718 aaKnown RBP14.45□□□□□ -0.1
HDAC4-208ENST00000463007 ZNF594Q96JF6 807 aaPredicted RBP14.45□□□□□ -0.1
HDAC4-208ENST00000463007 PCDHA7Q9UN72 937 aa14.45□□□□□ -0.1
HDAC4-208ENST00000463007 CLIC4Q9Y696 253 aa14.45□□□□□ -0.1
HDAC4-208ENST00000463007 LAMB2P55268 1798 aa14.45□□□□□ -0.1
HDAC4-208ENST00000463007 ATP1A3P13637 1013 aa14.44□□□□□ -0.1
HDAC4-208ENST00000463007 WASHC4Q2M389 1173 aa14.44□□□□□ -0.1
HDAC4-208ENST00000463007 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.44□□□□□ -0.1
HDAC4-208ENST00000463007 KLHL34Q8N239 644 aa14.44□□□□□ -0.1
HDAC4-208ENST00000463007 PUS3Q9BZE2 481 aaKnown RBP14.44□□□□□ -0.1
HDAC4-208ENST00000463007 ZSWIM4Q9H7M6 989 aa14.44□□□□□ -0.1
HDAC4-208ENST00000463007 CDHR2Q9BYE9 1310 aa14.44□□□□□ -0.1
HDAC4-208ENST00000463007 FOXP2O15409 715 aa14.44□□□□□ -0.1
HDAC4-208ENST00000463007 SLU7O95391 586 aaKnown RBP14.44□□□□□ -0.1
HDAC4-208ENST00000463007 CTDNEP1O95476 244 aa14.44□□□□□ -0.1
HDAC4-208ENST00000463007 SLFN14P0C7P3 912 aa14.44□□□□□ -0.1
HDAC4-208ENST00000463007 SFPQP23246 707 aaKnown RBP eCLIP14.44□□□□□ -0.14e-6■■■■□ 23.6
HDAC4-208ENST00000463007 ARHGAP29Q52LW3 1261 aa14.44□□□□□ -0.1
HDAC4-208ENST00000463007 DNAJC10Q8IXB1 793 aa14.44□□□□□ -0.1
HDAC4-208ENST00000463007 ZNF397Q8NF99 534 aaPredicted RBP14.44□□□□□ -0.1
HDAC4-208ENST00000463007 AGXT2Q9BYV1 514 aa14.44□□□□□ -0.1
HDAC4-208ENST00000463007 PAG1Q9NWQ8 432 aa14.44□□□□□ -0.1
HDAC4-208ENST00000463007 URI1O94763 535 aaPredicted RBP14.44□□□□□ -0.1
HDAC4-208ENST00000463007 HELLSQ9NRZ9 838 aa14.44□□□□□ -0.1
HDAC4-208ENST00000463007 U3KPZ7 1027 aaPredicted RBP14.44□□□□□ -0.1
HDAC4-208ENST00000463007 RBM6P78332 1123 aaKnown RBP14.43□□□□□ -0.1
HDAC4-208ENST00000463007 FAM160A1Q05DH4 1040 aa14.43□□□□□ -0.1
HDAC4-208ENST00000463007 KRT32Q14532 448 aa14.43□□□□□ -0.1
HDAC4-208ENST00000463007 PDILTQ8N807 584 aa14.43□□□□□ -0.1
HDAC4-208ENST00000463007 TEX13AQ9BXU3 409 aaPredicted RBP14.43□□□□□ -0.1
HDAC4-208ENST00000463007 ZSCAN16Q9H4T2 348 aaPredicted RBP14.43□□□□□ -0.1
HDAC4-208ENST00000463007 MAP3K15Q6ZN16 1313 aa14.43□□□□□ -0.1
HDAC4-208ENST00000463007 CDK11BP21127 795 aaKnown RBP14.43□□□□□ -0.1
HDAC4-208ENST00000463007 DSCC1Q9BVC3 393 aa14.43□□□□□ -0.1
HDAC4-208ENST00000463007 DOCK2Q92608 1830 aa14.43□□□□□ -0.1
HDAC4-208ENST00000463007 ABCC12Q96J65 1359 aa14.43□□□□□ -0.1
HDAC4-208ENST00000463007 A0A1B0GUL7 405 aa14.42□□□□□ -0.1
HDAC4-208ENST00000463007 ADD1P35611 737 aaKnown RBP14.42□□□□□ -0.1
HDAC4-208ENST00000463007 BTG4Q9NY30 223 aa14.42□□□□□ -0.1
HDAC4-208ENST00000463007 MYO5AQ9Y4I1 1855 aaKnown RBP14.42□□□□□ -0.1
HDAC4-208ENST00000463007 SEC31AO94979 1220 aaKnown RBP14.42□□□□□ -0.1
HDAC4-208ENST00000463007 CYP19A1P11511 503 aaPredicted RBP14.42□□□□□ -0.1
HDAC4-208ENST00000463007 PDIA4P13667 645 aaKnown RBP14.42□□□□□ -0.1
HDAC4-208ENST00000463007 TERF2Q15554 542 aa14.42□□□□□ -0.1
HDAC4-208ENST00000463007 SPECC1Q5M775 1068 aa14.42□□□□□ -0.1
HDAC4-208ENST00000463007 GIGYF2Q6Y7W6 1299 aaKnown RBP14.42□□□□□ -0.1
HDAC4-208ENST00000463007 ZBTB38Q8NAP3 1195 aaPredicted RBP14.42□□□□□ -0.1
HDAC4-208ENST00000463007 AIFM3Q96NN9 605 aa14.42□□□□□ -0.1
HDAC4-208ENST00000463007 CPLX1O14810 134 aa14.42□□□□□ -0.1
HDAC4-208ENST00000463007 SERPINC1P01008 464 aa14.42□□□□□ -0.1
HDAC4-208ENST00000463007 ATP2B1P20020 1258 aa14.42□□□□□ -0.1
HDAC4-208ENST00000463007 E4F1Q66K89 784 aaPredicted RBP14.42□□□□□ -0.1
HDAC4-208ENST00000463007 DHX32Q7L7V1 743 aaKnown RBP14.42□□□□□ -0.1
HDAC4-208ENST00000463007 MRFAP1L1Q96HT8 127 aa14.42□□□□□ -0.1
HDAC4-208ENST00000463007 ZNF396Q96N95 335 aaPredicted RBP14.42□□□□□ -0.1
HDAC4-208ENST00000463007 NAT10Q9H0A0 1025 aaKnown RBP14.42□□□□□ -0.1
HDAC4-208ENST00000463007 ZNF831Q5JPB2 1677 aa14.42□□□□□ -0.1
HDAC4-208ENST00000463007 MAST3O60307 1309 aa14.41□□□□□ -0.1
HDAC4-208ENST00000463007 CFAP100Q494V2 611 aa14.41□□□□□ -0.1
HDAC4-208ENST00000463007 ARMCX5Q6P1M9 558 aa14.41□□□□□ -0.1
HDAC4-208ENST00000463007 RBM43Q6ZSC3 357 aaKnown RBP14.41□□□□□ -0.1
HDAC4-208ENST00000463007 MRPS27Q92552 414 aaKnown RBP14.41□□□□□ -0.1
HDAC4-208ENST00000463007 CCDC34Q96HJ3 373 aa14.41□□□□□ -0.1
HDAC4-208ENST00000463007 UTP14AQ9BVJ6 771 aaKnown RBP14.41□□□□□ -0.1
HDAC4-208ENST00000463007 ZCCHC17Q9NP64 241 aaKnown RBP14.41□□□□□ -0.1
HDAC4-208ENST00000463007 COL5A3P25940 1745 aaPredicted RBP14.41□□□□□ -0.1
HDAC4-208ENST00000463007 EVA1CP58658 441 aa14.41□□□□□ -0.1
HDAC4-208ENST00000463007 EXOSC10Q01780 885 aaKnown RBP14.41□□□□□ -0.1
HDAC4-208ENST00000463007 SYNE3Q6ZMZ3 975 aa14.41□□□□□ -0.1
HDAC4-208ENST00000463007 NBPF11Q86T75 865 aa14.41□□□□□ -0.1
HDAC4-208ENST00000463007 MNS1Q8NEH6 495 aa14.41□□□□□ -0.1
HDAC4-208ENST00000463007 ZNF446Q9NWS9 450 aa14.41□□□□□ -0.1
HDAC4-208ENST00000463007 SLC3A2P08195 630 aaKnown RBP14.4□□□□□ -0.1
HDAC4-208ENST00000463007 CCDC82Q8N4S0 544 aa14.4□□□□□ -0.1
HDAC4-208ENST00000463007 VGLL2Q8N8G2 317 aa14.4□□□□□ -0.1
HDAC4-208ENST00000463007 PPP1R13BQ96KQ4 1090 aa14.4□□□□□ -0.1
HDAC4-208ENST00000463007 RCOR1Q9UKL0 485 aa14.4□□□□□ -0.1
HDAC4-208ENST00000463007 E7EWF7 191 aa14.4□□□□□ -0.1
HDAC4-208ENST00000463007 HLFQ16534 295 aa14.4□□□□□ -0.1
HDAC4-208ENST00000463007 NYAP1Q6ZVC0 841 aa14.4□□□□□ -0.1
HDAC4-208ENST00000463007 FBXL16Q8N461 479 aa14.4□□□□□ -0.1
HDAC4-208ENST00000463007 C8orf76Q96K31 380 aa14.4□□□□□ -0.1
HDAC4-208ENST00000463007 BCORQ6W2J9 1755 aa14.4□□□□□ -0.1
HDAC4-208ENST00000463007 CASZ1Q86V15 1759 aa14.4□□□□□ -0.1
HDAC4-208ENST00000463007 ATRNO75882 1429 aa14.4□□□□□ -0.1
HDAC4-208ENST00000463007 A0A1B0GUL6 1792 aa14.4□□□□□ -0.1
HDAC4-208ENST00000463007 ILDR1Q86SU0 546 aaPredicted RBP14.4□□□□□ -0.1
HDAC4-208ENST00000463007 NLRP10Q86W26 655 aa14.4□□□□□ -0.1
HDAC4-208ENST00000463007 ERO1AQ96HE7 468 aa14.4□□□□□ -0.1
HDAC4-208ENST00000463007 LTBP4Q8N2S1 1624 aa14.4□□□□□ -0.1
HDAC4-208ENST00000463007 GYS2P54840 703 aa14.39□□□□□ -0.11
HDAC4-208ENST00000463007 SMARCC2Q8TAQ2 1214 aa14.39□□□□□ -0.11
HDAC4-208ENST00000463007 RIPOR2Q9Y4F9 1068 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms