RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 PA2G4Q9UQ80 394 aaKnown RBP11.02□□□□□ -0.65
DDX39B-216ENST00000462421 SPDYE2BA6NHP3 402 aa11.01□□□□□ -0.65
DDX39B-216ENST00000462421 SURF6O75683 361 aaKnown RBP11.01□□□□□ -0.65
DDX39B-216ENST00000462421 WDHD1O75717 1129 aaPredicted RBP11.01□□□□□ -0.65
DDX39B-216ENST00000462421 UQCRFS1P1P0C7P4 283 aa11.01□□□□□ -0.65
DDX39B-216ENST00000462421 SPDYE6P0CI01 402 aa11.01□□□□□ -0.65
DDX39B-216ENST00000462421 GSTO1P78417 241 aa11.01□□□□□ -0.65
DDX39B-216ENST00000462421 HDLBPQ00341 1268 aaKnown RBP11.01□□□□□ -0.65
DDX39B-216ENST00000462421 MTX1Q13505 466 aa11.01□□□□□ -0.65
DDX39B-216ENST00000462421 TTC39AQ5SRH9 613 aa11.01□□□□□ -0.65
DDX39B-216ENST00000462421 CST9Q5W186 159 aa11.01□□□□□ -0.65
DDX39B-216ENST00000462421 MTMR14Q8NCE2 650 aa11.01□□□□□ -0.65
DDX39B-216ENST00000462421 YTHDC1Q96MU7 727 aaKnown RBP11.01□□□□□ -0.65
DDX39B-216ENST00000462421 DEFB129Q9H1M3 183 aa11.01□□□□□ -0.65
DDX39B-216ENST00000462421 ZBTB47Q9UFB7 747 aaPredicted RBP11.01□□□□□ -0.65
DDX39B-216ENST00000462421 A0A1B0GUL7 405 aa11□□□□□ -0.65
DDX39B-216ENST00000462421 RFX5P48382 616 aaPredicted RBP11□□□□□ -0.65
DDX39B-216ENST00000462421 FMR1Q06787 632 aaKnown RBP eCLIP11□□□□□ -0.65
DDX39B-216ENST00000462421 SREBF2Q12772 1141 aa11□□□□□ -0.65
DDX39B-216ENST00000462421 TFCP2Q12800 502 aa11□□□□□ -0.65
DDX39B-216ENST00000462421 PRKG1Q13976 671 aa11□□□□□ -0.65
DDX39B-216ENST00000462421 TNS4Q8IZW8 715 aa11□□□□□ -0.65
DDX39B-216ENST00000462421 VGLL2Q8N8G2 317 aa11□□□□□ -0.65
DDX39B-216ENST00000462421 ABCF2Q9UG63 623 aa11□□□□□ -0.65
DDX39B-216ENST00000462421 FGFR2P21802 821 aa10.99□□□□□ -0.65
DDX39B-216ENST00000462421 ERICH6Q7L0X2 663 aa10.99□□□□□ -0.65
DDX39B-216ENST00000462421 ATG9AQ7Z3C6 839 aa10.99□□□□□ -0.65
DDX39B-216ENST00000462421 CERS5Q8N5B7 392 aa10.99□□□□□ -0.65
DDX39B-216ENST00000462421 XAGE2Q96GT9 111 aa10.99□□□□□ -0.65
DDX39B-216ENST00000462421 C1orf115Q9H7X2 142 aa10.99□□□□□ -0.65
DDX39B-216ENST00000462421 ANGEL1Q9UNK9 670 aaKnown RBP10.99□□□□□ -0.65
DDX39B-216ENST00000462421 CSADQ9Y600 493 aa10.99□□□□□ -0.65
DDX39B-216ENST00000462421 ASTN2O75129 1339 aaPredicted RBP10.99□□□□□ -0.65
DDX39B-216ENST00000462421 TCP10L2B9ZVM9 353 aa10.98□□□□□ -0.65
DDX39B-216ENST00000462421 LDHCP07864 332 aa10.98□□□□□ -0.65
DDX39B-216ENST00000462421 ATP8B2P98198 1209 aa10.98□□□□□ -0.65
DDX39B-216ENST00000462421 DCAF15Q66K64 600 aa10.98□□□□□ -0.65
DDX39B-216ENST00000462421 CCDC102BQ68D86 513 aa10.98□□□□□ -0.65
DDX39B-216ENST00000462421 OTUD7BQ6GQQ9 843 aa10.98□□□□□ -0.65
DDX39B-216ENST00000462421 PANK1Q8TE04 598 aa10.98□□□□□ -0.65
DDX39B-216ENST00000462421 SLC10A4Q96EP9 437 aa10.98□□□□□ -0.65
DDX39B-216ENST00000462421 BCL11AQ9H165 835 aa10.98□□□□□ -0.65
DDX39B-216ENST00000462421 TDRD3Q9H7E2 651 aaKnown RBP10.98□□□□□ -0.65
DDX39B-216ENST00000462421 LRP2BPQ9P2M1 347 aa10.98□□□□□ -0.65
DDX39B-216ENST00000462421 ZNF70Q9UC06 446 aaPredicted RBP10.98□□□□□ -0.65
DDX39B-216ENST00000462421 AOC2O75106 756 aa10.97□□□□□ -0.65
DDX39B-216ENST00000462421 RASA3Q14644 834 aa10.97□□□□□ -0.65
DDX39B-216ENST00000462421 SPDYE2Q495Y8 402 aa10.97□□□□□ -0.65
DDX39B-216ENST00000462421 PRAMEF18Q5VWM3 479 aa10.97□□□□□ -0.65
DDX39B-216ENST00000462421 HHIPL2Q6UWX4 724 aa10.97□□□□□ -0.65
DDX39B-216ENST00000462421 ZSCAN29Q8IWY8 852 aaPredicted RBP10.97□□□□□ -0.65
DDX39B-216ENST00000462421 WBP1LQ9NX94 342 aa10.97□□□□□ -0.65
DDX39B-216ENST00000462421 RAI14Q9P0K7 980 aa10.97□□□□□ -0.65
DDX39B-216ENST00000462421 IRS2Q9Y4H2 1338 aa10.97□□□□□ -0.65
DDX39B-216ENST00000462421 CEP350Q5VT06 3117 aa10.96□□□□□ -0.65
DDX39B-216ENST00000462421 PDS5AQ29RF7 1337 aaKnown RBP10.96□□□□□ -0.65
DDX39B-216ENST00000462421 UNCXA6NJT0 531 aa10.96□□□□□ -0.65
DDX39B-216ENST00000462421 UBE2Q2LH0YL09 131 aa10.96□□□□□ -0.65
DDX39B-216ENST00000462421 SLC10A3P09131 477 aa10.96□□□□□ -0.65
DDX39B-216ENST00000462421 PHKA1P46020 1223 aa10.96□□□□□ -0.65
DDX39B-216ENST00000462421 TIMM10P62072 90 aa10.96□□□□□ -0.65
DDX39B-216ENST00000462421 PDE3AQ14432 1141 aa10.96□□□□□ -0.65
DDX39B-216ENST00000462421 RPAP2Q8IXW5 612 aaPredicted RBP10.96□□□□□ -0.65
DDX39B-216ENST00000462421 ANKRD13AQ8IZ07 590 aa10.96□□□□□ -0.65
DDX39B-216ENST00000462421 CLASRPQ8N2M8 674 aaKnown RBP10.96□□□□□ -0.65
DDX39B-216ENST00000462421 PRMT6Q96LA8 375 aaPredicted RBP10.96□□□□□ -0.65
DDX39B-216ENST00000462421 ZDHHC15Q96MV8 337 aa10.96□□□□□ -0.65
DDX39B-216ENST00000462421 MRIQ9BWK5 157 aa10.96□□□□□ -0.65
DDX39B-216ENST00000462421 TRIM34Q9BYJ4 488 aa10.96□□□□□ -0.65
DDX39B-216ENST00000462421 PRDM10Q9NQV6 1147 aa10.96□□□□□ -0.65
DDX39B-216ENST00000462421 SCAF8Q9UPN6 1271 aaKnown RBP10.96□□□□□ -0.65
DDX39B-216ENST00000462421 TNNQ9UQP3 1299 aa10.96□□□□□ -0.65
DDX39B-216ENST00000462421 COG6Q9Y2V7 657 aa10.96□□□□□ -0.65
DDX39B-216ENST00000462421 SCN9AQ15858 1988 aa10.96□□□□□ -0.66
DDX39B-216ENST00000462421 TRPM7Q96QT4 1865 aa10.95□□□□□ -0.66
DDX39B-216ENST00000462421 PAPPA2Q9BXP8 1791 aa10.95□□□□□ -0.66
DDX39B-216ENST00000462421 SALL1Q9NSC2 1324 aa10.95□□□□□ -0.66
DDX39B-216ENST00000462421 PNMA6EA0A0J9YXQ4 647 aa10.95□□□□□ -0.66
DDX39B-216ENST00000462421 ZBTB7BO15156 539 aaPredicted RBP10.95□□□□□ -0.66
DDX39B-216ENST00000462421 FOXN1O15353 648 aa10.95□□□□□ -0.66
DDX39B-216ENST00000462421 BAG3O95817 575 aa10.95□□□□□ -0.66
DDX39B-216ENST00000462421 ALDH1A1P00352 501 aa10.95□□□□□ -0.66
DDX39B-216ENST00000462421 IFIT2P09913 472 aaKnown RBP10.95□□□□□ -0.66
DDX39B-216ENST00000462421 LBX1P52954 281 aa10.95□□□□□ -0.66
DDX39B-216ENST00000462421 KIF23Q02241 960 aaPredicted RBP10.95□□□□□ -0.66
DDX39B-216ENST00000462421 SPATA5Q8NB90 893 aa10.95□□□□□ -0.66
DDX39B-216ENST00000462421 GPATCH3Q96I76 525 aa10.95□□□□□ -0.66
DDX39B-216ENST00000462421 GPR108Q9NPR9 543 aa10.95□□□□□ -0.66
DDX39B-216ENST00000462421 PSME4Q14997 1843 aa10.95□□□□□ -0.66
DDX39B-216ENST00000462421 MANSC4A6NHS7 340 aaPredicted RBP10.94□□□□□ -0.66
DDX39B-216ENST00000462421 APBB1O00213 710 aa10.94□□□□□ -0.66
DDX39B-216ENST00000462421 PLCG2P16885 1265 aa10.94□□□□□ -0.66
DDX39B-216ENST00000462421 ADORA1P30542 326 aa10.94□□□□□ -0.66
DDX39B-216ENST00000462421 MKRN3Q13064 507 aaKnown RBP10.94□□□□□ -0.66
DDX39B-216ENST00000462421 TNNI3KQ59H18 835 aa10.94□□□□□ -0.66
DDX39B-216ENST00000462421 FKBP1CQ5VVH2 108 aa10.94□□□□□ -0.66
DDX39B-216ENST00000462421 CEP85Q6P2H3 762 aa10.94□□□□□ -0.66
DDX39B-216ENST00000462421 FAM83AQ86UY5 434 aa10.94□□□□□ -0.66
DDX39B-216ENST00000462421 AACSQ86V21 672 aa10.94□□□□□ -0.66
DDX39B-216ENST00000462421 RASAL3Q86YV0 1011 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms