RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 IFT57Q9NWB7 429 aa19.57■□□□□ 0.72
APP-211ENST00000462267 BTBD19C9JJ37 291 aa19.56■□□□□ 0.72
APP-211ENST00000462267 SNAP23O00161 211 aa19.56■□□□□ 0.72
APP-211ENST00000462267 GRK4P32298 578 aa19.56■□□□□ 0.72
APP-211ENST00000462267 GNAI1P63096 354 aa19.56■□□□□ 0.72
APP-211ENST00000462267 SNAPC2Q13487 334 aa19.56■□□□□ 0.72
APP-211ENST00000462267 TDRD3Q9H7E2 651 aaKnown RBP19.56■□□□□ 0.72
APP-211ENST00000462267 SERPINA10Q9UK55 444 aa19.56■□□□□ 0.72
APP-211ENST00000462267 TAF5LO75529 589 aa19.55■□□□□ 0.72
APP-211ENST00000462267 CCL5P13501 91 aa19.55■□□□□ 0.72
APP-211ENST00000462267 PSMC4P43686 418 aa19.55■□□□□ 0.72
APP-211ENST00000462267 TNNI2P48788 182 aa19.55■□□□□ 0.72
APP-211ENST00000462267 C17orf99Q6UX52 265 aa19.55■□□□□ 0.72
APP-211ENST00000462267 ERO1BQ86YB8 467 aa19.55■□□□□ 0.72
APP-211ENST00000462267 CDAN1Q8IWY9 1227 aa19.55■□□□□ 0.72
APP-211ENST00000462267 RAET1EQ8TD07 263 aa19.55■□□□□ 0.72
APP-211ENST00000462267 TRIM47Q96LD4 638 aa19.55■□□□□ 0.72
APP-211ENST00000462267 RIPOR2Q9Y4F9 1068 aa19.55■□□□□ 0.72
APP-211ENST00000462267 ZSWIM8A7E2V4 1837 aa19.54■□□□□ 0.72
APP-211ENST00000462267 SOX1O00570 391 aaPredicted RBP19.54■□□□□ 0.72
APP-211ENST00000462267 CALD1Q05682 793 aaKnown RBP19.54■□□□□ 0.72
APP-211ENST00000462267 C8orf58Q8NAV2 365 aa19.54■□□□□ 0.72
APP-211ENST00000462267 TMEM39BQ9GZU3 492 aa19.54■□□□□ 0.72
APP-211ENST00000462267 RNF208Q9H0X6 261 aa19.54■□□□□ 0.72
APP-211ENST00000462267 JAG2Q9Y219 1238 aa19.54■□□□□ 0.72
APP-211ENST00000462267 FAM205AQ6ZU69 1335 aa19.53■□□□□ 0.72
APP-211ENST00000462267 ANKRD18BA2A2Z9 1011 aa19.53■□□□□ 0.72
APP-211ENST00000462267 TCP10L2B9ZVM9 353 aa19.53■□□□□ 0.72
APP-211ENST00000462267 FARP2O94887 1054 aaPredicted RBP19.53■□□□□ 0.72
APP-211ENST00000462267 OSBPP22059 807 aa19.53■□□□□ 0.72
APP-211ENST00000462267 UBXN2AP68543 259 aa19.53■□□□□ 0.72
APP-211ENST00000462267 DZIP1LQ8IYY4 767 aaKnown RBP19.53■□□□□ 0.72
APP-211ENST00000462267 LRCH3Q96II8 777 aa19.53■□□□□ 0.72
APP-211ENST00000462267 TTF2Q9UNY4 1162 aaKnown RBP19.53■□□□□ 0.72
APP-211ENST00000462267 LAMA3Q16787 3333 aa19.52■□□□□ 0.72
APP-211ENST00000462267 IRF6O14896 467 aa19.52■□□□□ 0.72
APP-211ENST00000462267 FMNL1O95466 1100 aaPredicted RBP19.52■□□□□ 0.72
APP-211ENST00000462267 CAPN2P17655 700 aa19.52■□□□□ 0.72
APP-211ENST00000462267 CTGFP29279 349 aa19.52■□□□□ 0.72
APP-211ENST00000462267 GCKRQ14397 625 aa19.52■□□□□ 0.72
APP-211ENST00000462267 WDR43Q15061 677 aaKnown RBP eCLIP19.52■□□□□ 0.72
APP-211ENST00000462267 BIN2Q9UBW5 565 aaPredicted RBP19.52■□□□□ 0.72
APP-211ENST00000462267 SNCAIPQ9Y6H5 919 aa19.52■□□□□ 0.72
APP-211ENST00000462267 EVI5O60447 810 aa19.51■□□□□ 0.71
APP-211ENST00000462267 CASP7P55210 303 aa19.51■□□□□ 0.71
APP-211ENST00000462267 PPIL2Q13356 520 aa19.51■□□□□ 0.71
APP-211ENST00000462267 MFSD14BQ5SR56 506 aa19.51■□□□□ 0.71
APP-211ENST00000462267 GPR153Q6NV75 609 aa19.51■□□□□ 0.71
APP-211ENST00000462267 U2AF1L4Q8WU68 220 aaKnown RBP19.51■□□□□ 0.71
APP-211ENST00000462267 CPA4Q9UI42 421 aa19.51■□□□□ 0.71
APP-211ENST00000462267 MYPNQ86TC9 1320 aa19.51■□□□□ 0.71
APP-211ENST00000462267 ECM2O94769 699 aaPredicted RBP19.5■□□□□ 0.71
APP-211ENST00000462267 IFIT5Q13325 482 aaKnown RBP19.49■□□□□ 0.71
APP-211ENST00000462267 ANKRD23Q86SG2 305 aa19.49■□□□□ 0.71
APP-211ENST00000462267 HOOK2Q96ED9 719 aa19.49■□□□□ 0.71
APP-211ENST00000462267 WRNIP1Q96S55 665 aa19.49■□□□□ 0.71
APP-211ENST00000462267 STK31Q9BXU1 1019 aa19.49■□□□□ 0.71
APP-211ENST00000462267 MYH16Q9H6N6 1097 aa19.49■□□□□ 0.71
APP-211ENST00000462267 STAP2Q9UGK3 403 aa19.49■□□□□ 0.71
APP-211ENST00000462267 ADAMTS8Q9UP79 889 aa19.49■□□□□ 0.71
APP-211ENST00000462267 SGPL1O95470 568 aa19.48■□□□□ 0.71
APP-211ENST00000462267 CRKP46108 304 aa19.48■□□□□ 0.71
APP-211ENST00000462267 SLAIN1Q8ND83 568 aa19.48■□□□□ 0.71
APP-211ENST00000462267 TDRD7Q8NHU6 1098 aaKnown RBP19.48■□□□□ 0.71
APP-211ENST00000462267 ZKSCAN4Q969J2 545 aaPredicted RBP19.48■□□□□ 0.71
APP-211ENST00000462267 ARAP2Q8WZ64 1704 aa19.48■□□□□ 0.71
APP-211ENST00000462267 PPATQ06203 517 aa19.47■□□□□ 0.71
APP-211ENST00000462267 ADGRA2Q96PE1 1338 aa19.47■□□□□ 0.71
APP-211ENST00000462267 PDHXO00330 501 aa19.46■□□□□ 0.71
APP-211ENST00000462267 TSPYL6Q8N831 410 aa19.46■□□□□ 0.71
APP-211ENST00000462267 UNC93B1Q9H1C4 597 aa19.46■□□□□ 0.71
APP-211ENST00000462267 STXBP5LQ9Y2K9 1186 aa19.46■□□□□ 0.71
APP-211ENST00000462267 MYBBP1AQ9BQG0 1328 aaKnown RBP19.46■□□□□ 0.71
APP-211ENST00000462267 BMP8BP34820 402 aa19.45■□□□□ 0.7
APP-211ENST00000462267 FCGRTP55899 365 aa19.45■□□□□ 0.7
APP-211ENST00000462267 HDLBPQ00341 1268 aaKnown RBP19.45■□□□□ 0.7
APP-211ENST00000462267 PRKCZQ05513 592 aa19.45■□□□□ 0.7
APP-211ENST00000462267 DEFB123Q8N688 67 aa19.45■□□□□ 0.7
APP-211ENST00000462267 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.45■□□□□ 0.7
APP-211ENST00000462267 HIBADHP31937 336 aaKnown RBP19.44■□□□□ 0.7
APP-211ENST00000462267 DCAF15Q66K64 600 aa19.44■□□□□ 0.7
APP-211ENST00000462267 FAM83AQ86UY5 434 aa19.44■□□□□ 0.7
APP-211ENST00000462267 LINS1Q8NG48 757 aa19.44■□□□□ 0.7
APP-211ENST00000462267 PLIN1O60240 522 aa19.43■□□□□ 0.7
APP-211ENST00000462267 TFRCP02786 760 aaKnown RBP19.43■□□□□ 0.7
APP-211ENST00000462267 FKBP1CQ5VVH2 108 aa19.43■□□□□ 0.7
APP-211ENST00000462267 LDHAL6AQ6ZMR3 332 aa19.43■□□□□ 0.7
APP-211ENST00000462267 G2E3Q7L622 706 aa19.43■□□□□ 0.7
APP-211ENST00000462267 GDF15Q99988 308 aa19.43■□□□□ 0.7
APP-211ENST00000462267 TMOD2Q9NZR1 351 aa19.43■□□□□ 0.7
APP-211ENST00000462267 KCNH4Q9UQ05 1017 aa19.43■□□□□ 0.7
APP-211ENST00000462267 SLC4A2P04920 1241 aa19.42■□□□□ 0.7
APP-211ENST00000462267 FOXO4P98177 505 aa19.42■□□□□ 0.7
APP-211ENST00000462267 UBE4AQ14139 1066 aa19.42■□□□□ 0.7
APP-211ENST00000462267 PARK7Q99497 189 aaKnown RBP19.42■□□□□ 0.7
APP-211ENST00000462267 ZNF341Q9BYN7 854 aa19.42■□□□□ 0.7
APP-211ENST00000462267 CNNM1Q9NRU3 951 aa19.42■□□□□ 0.7
APP-211ENST00000462267 CHMP3Q9Y3E7 222 aa19.42■□□□□ 0.7
APP-211ENST00000462267 A0A1B0GUL6 1792 aa19.42■□□□□ 0.7
APP-211ENST00000462267 APAF1O14727 1248 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms