RNA–Protein interactions for RNA: ENST00000462212.5

ITSN1-222, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-222	ENST00000462212	CAPNS2	Q96L46	248 aa		10.32	□□□□□ -0.76
ITSN1-222	ENST00000462212	DENND2A	Q9ULE3	1009 aa		10.32	□□□□□ -0.76
ITSN1-222	ENST00000462212	SCAF8	Q9UPN6	1271 aa	Known RBP	10.32	□□□□□ -0.76
ITSN1-222	ENST00000462212	MAST3	O60307	1309 aa		10.32	□□□□□ -0.76
ITSN1-222	ENST00000462212	WDR33	Q9C0J8	1336 aa	Known RBP	10.32	□□□□□ -0.76
ITSN1-222	ENST00000462212	MYO1B	O43795	1136 aa		10.31	□□□□□ -0.76
ITSN1-222	ENST00000462212	SURF6	O75683	361 aa	Known RBP	10.31	□□□□□ -0.76
ITSN1-222	ENST00000462212	HOXD11	P31277	338 aa	Predicted RBP	10.31	□□□□□ -0.76
ITSN1-222	ENST00000462212	ECE1	P42892	770 aa		10.31	□□□□□ -0.76
ITSN1-222	ENST00000462212	HUNK	P57058	714 aa		10.31	□□□□□ -0.76
ITSN1-222	ENST00000462212	RASGRF1	Q13972	1273 aa		10.31	□□□□□ -0.76
ITSN1-222	ENST00000462212	SPDYE2	Q495Y8	402 aa		10.31	□□□□□ -0.76
ITSN1-222	ENST00000462212	CYP4F22	Q6NT55	531 aa		10.31	□□□□□ -0.76
ITSN1-222	ENST00000462212	RPAP2	Q8IXW5	612 aa	Predicted RBP	10.31	□□□□□ -0.76
ITSN1-222	ENST00000462212	CNKSR2	Q8WXI2	1034 aa		10.31	□□□□□ -0.76
ITSN1-222	ENST00000462212	ZDHHC15	Q96MV8	337 aa		10.31	□□□□□ -0.76
ITSN1-222	ENST00000462212	CHMP4B	Q9H444	224 aa	Known RBP	10.31	□□□□□ -0.76
ITSN1-222	ENST00000462212	PPP2R3B	Q9Y5P8	575 aa		10.31	□□□□□ -0.76
ITSN1-222	ENST00000462212	CLRN2	A0PK11	232 aa		10.3	□□□□□ -0.76
ITSN1-222	ENST00000462212	ARID4A	P29374	1257 aa	Predicted RBP	10.3	□□□□□ -0.76
ITSN1-222	ENST00000462212	PRDX5	P30044	214 aa		10.3	□□□□□ -0.76
ITSN1-222	ENST00000462212	RBM5	P52756	815 aa	Known RBP eCLIP	10.3	□□□□□ -0.76
ITSN1-222	ENST00000462212	TNNI3K	Q59H18	835 aa		10.3	□□□□□ -0.76
ITSN1-222	ENST00000462212	PRAMEF18	Q5VWM3	479 aa		10.3	□□□□□ -0.76
ITSN1-222	ENST00000462212	APOBEC3H	Q6NTF7	200 aa	Known RBP	10.3	□□□□□ -0.76
ITSN1-222	ENST00000462212	HHIPL2	Q6UWX4	724 aa		10.3	□□□□□ -0.76
ITSN1-222	ENST00000462212	SIRT2	Q8IXJ6	389 aa		10.3	□□□□□ -0.76
ITSN1-222	ENST00000462212	TEKT1	Q969V4	418 aa		10.3	□□□□□ -0.76
ITSN1-222	ENST00000462212	NEUROD6	Q96NK8	337 aa		10.3	□□□□□ -0.76
ITSN1-222	ENST00000462212	DEFB129	Q9H1M3	183 aa		10.3	□□□□□ -0.76
ITSN1-222	ENST00000462212	FPGT-TNNI3K	V9GXZ4	949 aa		10.3	□□□□□ -0.76
ITSN1-222	ENST00000462212	FAM155A	B1AL88	458 aa	Predicted RBP	10.29	□□□□□ -0.76
ITSN1-222	ENST00000462212	HSPA1A	P0DMV8	641 aa	Known RBP	10.29	□□□□□ -0.76
ITSN1-222	ENST00000462212	HSPA1B	P0DMV9	641 aa	Known RBP	10.29	□□□□□ -0.76
ITSN1-222	ENST00000462212	MAP2K2	P36507	400 aa		10.29	□□□□□ -0.76
ITSN1-222	ENST00000462212	OS9	Q13438	667 aa	Predicted RBP	10.29	□□□□□ -0.76
ITSN1-222	ENST00000462212	RGMB	Q6NW40	437 aa		10.29	□□□□□ -0.76
ITSN1-222	ENST00000462212	ZGPAT	Q8N5A5	531 aa	Known RBP	10.29	□□□□□ -0.76
ITSN1-222	ENST00000462212	TDRD3	Q9H7E2	651 aa	Known RBP	10.29	□□□□□ -0.76
ITSN1-222	ENST00000462212	WBP1L	Q9NX94	342 aa		10.29	□□□□□ -0.76
ITSN1-222	ENST00000462212	ZNF70	Q9UC06	446 aa	Predicted RBP	10.29	□□□□□ -0.76
ITSN1-222	ENST00000462212	SSC5D	A1L4H1	1573 aa		10.29	□□□□□ -0.76
ITSN1-222	ENST00000462212	HMMR	O75330	724 aa		10.28	□□□□□ -0.76
ITSN1-222	ENST00000462212	LDHB	P07195	334 aa	Known RBP	10.28	□□□□□ -0.76
ITSN1-222	ENST00000462212	NF2	P35240	595 aa		10.28	□□□□□ -0.76
ITSN1-222	ENST00000462212	TNFAIP1	Q13829	316 aa		10.28	□□□□□ -0.76
ITSN1-222	ENST00000462212	RASA3	Q14644	834 aa		10.28	□□□□□ -0.76
ITSN1-222	ENST00000462212	MAP3K11	Q16584	847 aa		10.28	□□□□□ -0.76
ITSN1-222	ENST00000462212	FKBP1C	Q5VVH2	108 aa		10.28	□□□□□ -0.76
ITSN1-222	ENST00000462212	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.28	□□□□□ -0.76
ITSN1-222	ENST00000462212	ERC1	Q8IUD2	1116 aa		10.28	□□□□□ -0.76
ITSN1-222	ENST00000462212	ZNF512B	Q96KM6	892 aa	Predicted RBP	10.28	□□□□□ -0.76
ITSN1-222	ENST00000462212	YTHDC1	Q96MU7	727 aa	Known RBP	10.28	□□□□□ -0.76
ITSN1-222	ENST00000462212	DBNDD2	Q9BQY9	259 aa		10.28	□□□□□ -0.76
ITSN1-222	ENST00000462212	VEZT	Q9HBM0	779 aa		10.28	□□□□□ -0.76
ITSN1-222	ENST00000462212	HMG20B	Q9P0W2	317 aa		10.28	□□□□□ -0.76
ITSN1-222	ENST00000462212	EXOC6B	Q9Y2D4	811 aa		10.28	□□□□□ -0.76
ITSN1-222	ENST00000462212	AKAP11	Q9UKA4	1901 aa		10.28	□□□□□ -0.76
ITSN1-222	ENST00000462212	AOC2	O75106	756 aa		10.27	□□□□□ -0.77
ITSN1-222	ENST00000462212	SLC10A3	P09131	477 aa		10.27	□□□□□ -0.77
ITSN1-222	ENST00000462212	UQCRFS1P1	P0C7P4	283 aa		10.27	□□□□□ -0.77
ITSN1-222	ENST00000462212	MCAM	P43121	646 aa		10.27	□□□□□ -0.77
ITSN1-222	ENST00000462212	RRP1	P56182	461 aa	Known RBP	10.27	□□□□□ -0.77
ITSN1-222	ENST00000462212	MAP2K1	Q02750	393 aa	Predicted RBP	10.27	□□□□□ -0.77
ITSN1-222	ENST00000462212	NOG	Q13253	232 aa		10.27	□□□□□ -0.77
ITSN1-222	ENST00000462212	DIXDC1	Q155Q3	683 aa		10.27	□□□□□ -0.77
ITSN1-222	ENST00000462212	HSP90AB4P	Q58FF6	505 aa		10.27	□□□□□ -0.77
ITSN1-222	ENST00000462212	GORAB	Q5T7V8	394 aa		10.27	□□□□□ -0.77
ITSN1-222	ENST00000462212	PI16	Q6UXB8	463 aa		10.27	□□□□□ -0.77
ITSN1-222	ENST00000462212	MOB2	Q70IA6	237 aa		10.27	□□□□□ -0.77
ITSN1-222	ENST00000462212	SPATA5	Q8NB90	893 aa		10.27	□□□□□ -0.77
ITSN1-222	ENST00000462212	CCDC102A	Q96A19	550 aa		10.27	□□□□□ -0.77
ITSN1-222	ENST00000462212	EAF2	Q96CJ1	260 aa	Predicted RBP	10.27	□□□□□ -0.77
ITSN1-222	ENST00000462212	FAM163A	Q96GL9	167 aa	Predicted RBP	10.27	□□□□□ -0.77
ITSN1-222	ENST00000462212	TEPSIN	Q96N21	525 aa		10.27	□□□□□ -0.77
ITSN1-222	ENST00000462212	DBNL	Q9UJU6	430 aa	Known RBP	10.27	□□□□□ -0.77
ITSN1-222	ENST00000462212	DAGLA	Q9Y4D2	1042 aa		10.27	□□□□□ -0.77
ITSN1-222	ENST00000462212	GAK	O14976	1311 aa		10.27	□□□□□ -0.77
ITSN1-222	ENST00000462212	MYH2	Q9UKX2	1941 aa		10.27	□□□□□ -0.77
ITSN1-222	ENST00000462212	UBE2Q2L	H0YL09	131 aa		10.26	□□□□□ -0.77
ITSN1-222	ENST00000462212	ZNF157	P51786	506 aa	Predicted RBP	10.26	□□□□□ -0.77
ITSN1-222	ENST00000462212	GRM1	Q13255	1194 aa		10.26	□□□□□ -0.77
ITSN1-222	ENST00000462212	SUPT20HL1	Q3ZLR7	823 aa		10.26	□□□□□ -0.77
ITSN1-222	ENST00000462212	LDLRAD1	Q5T700	205 aa		10.26	□□□□□ -0.77
ITSN1-222	ENST00000462212	NBPF12	Q5TAG4	269 aa	Predicted RBP	10.26	□□□□□ -0.77
ITSN1-222	ENST00000462212	SPTY2D1	Q68D10	685 aa	Predicted RBP	10.26	□□□□□ -0.77
ITSN1-222	ENST00000462212	FAM83A	Q86UY5	434 aa		10.26	□□□□□ -0.77
ITSN1-222	ENST00000462212	RASAL3	Q86YV0	1011 aa		10.26	□□□□□ -0.77
ITSN1-222	ENST00000462212	RHPN1	Q8TCX5	695 aa		10.26	□□□□□ -0.77
ITSN1-222	ENST00000462212	ZNF384	Q8TF68	577 aa		10.26	□□□□□ -0.77
ITSN1-222	ENST00000462212	ZIC5	Q96T25	663 aa		10.26	□□□□□ -0.77
ITSN1-222	ENST00000462212	RPAP1	Q9BWH6	1393 aa	Predicted RBP	10.26	□□□□□ -0.77
ITSN1-222	ENST00000462212	UNCX	A6NJT0	531 aa		10.25	□□□□□ -0.77
ITSN1-222	ENST00000462212	TCP10L2	B9ZVM9	353 aa		10.25	□□□□□ -0.77
ITSN1-222	ENST00000462212	FOXN1	O15353	648 aa		10.25	□□□□□ -0.77
ITSN1-222	ENST00000462212	PPP1R12B	O60237	982 aa	Predicted RBP	10.25	□□□□□ -0.77
ITSN1-222	ENST00000462212	RAB11FIP3	O75154	756 aa		10.25	□□□□□ -0.77
ITSN1-222	ENST00000462212	TNNI2	P48788	182 aa		10.25	□□□□□ -0.77
ITSN1-222	ENST00000462212	CACNB3	P54284	484 aa		10.25	□□□□□ -0.77
ITSN1-222	ENST00000462212	CCDC158	Q5M9N0	1113 aa		10.25	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms