RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 LRCH2Q5VUJ6 765 aa6.97□□□□□ -1.29
CLK1-207ENST00000461981 SUSD4Q5VX71 490 aa6.97□□□□□ -1.29
CLK1-207ENST00000461981 ZNF446Q9NWS9 450 aa6.97□□□□□ -1.29
CLK1-207ENST00000461981 U2SURPO15042 1029 aaKnown RBP6.97□□□□□ -1.29
CLK1-207ENST00000461981 GNRH1P01148 92 aa6.97□□□□□ -1.29
CLK1-207ENST00000461981 CYP2C19P33261 490 aa6.97□□□□□ -1.29
CLK1-207ENST00000461981 CST9Q5W186 159 aa6.97□□□□□ -1.29
CLK1-207ENST00000461981 BICDL1Q6ZP65 573 aa6.97□□□□□ -1.29
CLK1-207ENST00000461981 GBA2Q9HCG7 927 aaPredicted RBP6.97□□□□□ -1.29
CLK1-207ENST00000461981 RAI14Q9P0K7 980 aa6.97□□□□□ -1.29
CLK1-207ENST00000461981 CLEC11AQ9Y240 323 aa6.97□□□□□ -1.29
CLK1-207ENST00000461981 PCCAP05165 728 aaPredicted RBP6.96□□□□□ -1.29
CLK1-207ENST00000461981 PODNQ7Z5L7 613 aa6.96□□□□□ -1.29
CLK1-207ENST00000461981 APOBEC3FQ8IUX4 373 aaKnown RBP6.96□□□□□ -1.29
CLK1-207ENST00000461981 CCDC191Q8NCU4 936 aa6.96□□□□□ -1.29
CLK1-207ENST00000461981 PIK3R5Q8WYR1 880 aa6.96□□□□□ -1.29
CLK1-207ENST00000461981 PHACTR3Q96KR7 559 aa6.96□□□□□ -1.29
CLK1-207ENST00000461981 RPAP1Q9BWH6 1393 aaPredicted RBP6.96□□□□□ -1.29
CLK1-207ENST00000461981 ABT1Q9ULW3 272 aaKnown RBP6.96□□□□□ -1.29
CLK1-207ENST00000461981 KRBA2Q6ZNG9 492 aa6.96□□□□□ -1.3
CLK1-207ENST00000461981 GMLQ99445 158 aa6.96□□□□□ -1.3
CLK1-207ENST00000461981 MCOLN1Q9GZU1 580 aa6.96□□□□□ -1.3
CLK1-207ENST00000461981 DBF4Q9UBU7 674 aaPredicted RBP6.96□□□□□ -1.3
CLK1-207ENST00000461981 TESPA1A2RU30 521 aaPredicted RBP6.96□□□□□ -1.3
CLK1-207ENST00000461981 CTIFO43310 598 aaKnown RBP6.96□□□□□ -1.3
CLK1-207ENST00000461981 CT47B1P0C2W7 299 aaPredicted RBP6.96□□□□□ -1.3
CLK1-207ENST00000461981 U2AF1L5P0DN76 240 aaPredicted RBP6.96□□□□□ -1.3
CLK1-207ENST00000461981 DDIT3P35638 169 aa6.96□□□□□ -1.3
CLK1-207ENST00000461981 GMPSP49915 693 aaPredicted RBP6.96□□□□□ -1.3
CLK1-207ENST00000461981 U2AF1Q01081 240 aaKnown RBP eCLIP6.96□□□□□ -1.31e-7■■■□□ 17.6
CLK1-207ENST00000461981 CCDC27Q2M243 656 aa6.96□□□□□ -1.3
CLK1-207ENST00000461981 DEF6Q9H4E7 631 aa6.96□□□□□ -1.3
CLK1-207ENST00000461981 LEMD3Q9Y2U8 911 aa6.96□□□□□ -1.3
CLK1-207ENST00000461981 CCDC189A1A4V9 331 aa6.95□□□□□ -1.3
CLK1-207ENST00000461981 MPHOSPH10O00566 681 aaKnown RBP6.95□□□□□ -1.3
CLK1-207ENST00000461981 HLFQ16534 295 aa6.95□□□□□ -1.3
CLK1-207ENST00000461981 FBXO46Q6PJ61 603 aaPredicted RBP6.95□□□□□ -1.3
CLK1-207ENST00000461981 DCPSQ96C86 337 aaKnown RBP6.95□□□□□ -1.3
CLK1-207ENST00000461981 ZBED3Q96IU2 234 aaPredicted RBP6.95□□□□□ -1.3
CLK1-207ENST00000461981 BAG4O95429 457 aaKnown RBP6.95□□□□□ -1.3
CLK1-207ENST00000461981 TSGA10IPQ3SY00 556 aa6.95□□□□□ -1.3
CLK1-207ENST00000461981 NBPF11Q86T75 865 aa6.95□□□□□ -1.3
CLK1-207ENST00000461981 IFT57Q9NWB7 429 aa6.95□□□□□ -1.3
CLK1-207ENST00000461981 ZNF804BA4D1E1 1349 aa6.94□□□□□ -1.3
CLK1-207ENST00000461981 MANSC4A6NHS7 340 aaPredicted RBP6.94□□□□□ -1.3
CLK1-207ENST00000461981 ZBTB48P10074 688 aaPredicted RBP6.94□□□□□ -1.3
CLK1-207ENST00000461981 EAPPQ56P03 285 aaPredicted RBP6.94□□□□□ -1.3
CLK1-207ENST00000461981 GOLGA6L1Q8N7Z2 621 aa6.94□□□□□ -1.3
CLK1-207ENST00000461981 PRPF38AQ8NAV1 312 aaKnown RBP6.94□□□□□ -1.3
CLK1-207ENST00000461981 GTF3C6Q969F1 213 aa6.94□□□□□ -1.3
CLK1-207ENST00000461981 BORCS6Q96GS4 357 aa6.94□□□□□ -1.3
CLK1-207ENST00000461981 ANKRD2Q9GZV1 360 aa6.94□□□□□ -1.3
CLK1-207ENST00000461981 XDHP47989 1333 aa6.94□□□□□ -1.3
CLK1-207ENST00000461981 KCNQ3O43525 872 aa6.94□□□□□ -1.3
CLK1-207ENST00000461981 SSR1P43307 286 aaKnown RBP6.94□□□□□ -1.3
CLK1-207ENST00000461981 ANAPC15P60006 121 aa6.94□□□□□ -1.3
CLK1-207ENST00000461981 NBPF9Q3BBW0 867 aa6.94□□□□□ -1.3
CLK1-207ENST00000461981 RSBN1LQ6PCB5 846 aaPredicted RBP6.94□□□□□ -1.3
CLK1-207ENST00000461981 RPAINQ86UA6 219 aa6.94□□□□□ -1.3
CLK1-207ENST00000461981 RASAL3Q86YV0 1011 aa6.94□□□□□ -1.3
CLK1-207ENST00000461981 ZBTB38Q8NAP3 1195 aaPredicted RBP6.94□□□□□ -1.3
CLK1-207ENST00000461981 RUNDC1Q96C34 613 aa6.94□□□□□ -1.3
CLK1-207ENST00000461981 HOOK2Q96ED9 719 aa6.94□□□□□ -1.3
CLK1-207ENST00000461981 MRIQ9BWK5 157 aa6.94□□□□□ -1.3
CLK1-207ENST00000461981 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.94□□□□□ -1.3
CLK1-207ENST00000461981 V9GYY5 206 aaPredicted RBP6.94□□□□□ -1.3
CLK1-207ENST00000461981 MYBBP1AQ9BQG0 1328 aaKnown RBP6.94□□□□□ -1.3
CLK1-207ENST00000461981 KIF1CO43896 1103 aaKnown RBP6.94□□□□□ -1.3
CLK1-207ENST00000461981 CELF2O95319 508 aaKnown RBP6.94□□□□□ -1.3
CLK1-207ENST00000461981 DDX58O95786 925 aaKnown RBP6.94□□□□□ -1.3
CLK1-207ENST00000461981 NF2P35240 595 aa6.94□□□□□ -1.3
CLK1-207ENST00000461981 EPS15P42566 896 aa6.94□□□□□ -1.3
CLK1-207ENST00000461981 CCDC91Q7Z6B0 441 aa6.94□□□□□ -1.3
CLK1-207ENST00000461981 BCL2L13Q9BXK5 485 aa6.94□□□□□ -1.3
CLK1-207ENST00000461981 COA1Q9GZY4 146 aa6.94□□□□□ -1.3
CLK1-207ENST00000461981 MED4Q9NPJ6 270 aa6.94□□□□□ -1.3
CLK1-207ENST00000461981 CNOT7Q9UIV1 285 aaKnown RBP6.94□□□□□ -1.3
CLK1-207ENST00000461981 A0A1W2PPC1 479 aa6.93□□□□□ -1.3
CLK1-207ENST00000461981 PDE8AO60658 829 aa6.93□□□□□ -1.3
CLK1-207ENST00000461981 ATP2B1P20020 1258 aa6.93□□□□□ -1.3
CLK1-207ENST00000461981 TTC31Q49AM3 519 aaPredicted RBP6.93□□□□□ -1.3
CLK1-207ENST00000461981 CCDC152Q4G0S7 254 aa6.93□□□□□ -1.3
CLK1-207ENST00000461981 PACS2Q86VP3 889 aa6.93□□□□□ -1.3
CLK1-207ENST00000461981 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.93□□□□□ -1.3
CLK1-207ENST00000461981 CIZ1Q9ULV3 898 aaPredicted RBP6.93□□□□□ -1.3
CLK1-207ENST00000461981 TTC36A6NLP5 189 aa6.93□□□□□ -1.3
CLK1-207ENST00000461981 PLCB2Q00722 1185 aa6.93□□□□□ -1.3
CLK1-207ENST00000461981 MAP1SQ66K74 1059 aaPredicted RBP6.93□□□□□ -1.3
CLK1-207ENST00000461981 SMC5Q8IY18 1101 aa6.93□□□□□ -1.3
CLK1-207ENST00000461981 MNS1Q8NEH6 495 aa6.93□□□□□ -1.3
CLK1-207ENST00000461981 CDC5LQ99459 802 aaKnown RBP6.93□□□□□ -1.3
CLK1-207ENST00000461981 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.93□□□□□ -1.3
CLK1-207ENST00000461981 TSPYL4Q9UJ04 414 aa6.93□□□□□ -1.3
CLK1-207ENST00000461981 A0A1B0GUL7 405 aa6.92□□□□□ -1.3
CLK1-207ENST00000461981 PRPF40AO75400 957 aaKnown RBP6.92□□□□□ -1.3
CLK1-207ENST00000461981 REC8O95072 547 aa6.92□□□□□ -1.3
CLK1-207ENST00000461981 POTEIP0CG38 1075 aa6.92□□□□□ -1.3
CLK1-207ENST00000461981 POTEJP0CG39 1038 aa6.92□□□□□ -1.3
CLK1-207ENST00000461981 HDLBPQ00341 1268 aaKnown RBP6.92□□□□□ -1.3
CLK1-207ENST00000461981 FMR1Q06787 632 aaKnown RBP eCLIP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms