RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 CLUAP1Q96AJ1 413 aa19.36■□□□□ 0.69
SF3A3-203ENST00000461869 DDX19BQ9UMR2 479 aa19.36■□□□□ 0.69
SF3A3-203ENST00000461869 AOX1Q06278 1338 aa19.35■□□□□ 0.69
SF3A3-203ENST00000461869 F6X3S4 739 aa19.35■□□□□ 0.69
SF3A3-203ENST00000461869 USP2O75604 605 aaPredicted RBP19.35■□□□□ 0.69
SF3A3-203ENST00000461869 RASA3Q14644 834 aa19.35■□□□□ 0.69
SF3A3-203ENST00000461869 CCDC57Q2TAC2 916 aa19.35■□□□□ 0.69
SF3A3-203ENST00000461869 TAF7LQ5H9L4 462 aa19.35■□□□□ 0.69
SF3A3-203ENST00000461869 INTS3Q68E01 1043 aaKnown RBP19.35■□□□□ 0.69
SF3A3-203ENST00000461869 LDHAL6AQ6ZMR3 332 aa19.35■□□□□ 0.69
SF3A3-203ENST00000461869 ERO1AQ96HE7 468 aa19.35■□□□□ 0.69
SF3A3-203ENST00000461869 ZNF594Q96JF6 807 aaPredicted RBP19.35■□□□□ 0.69
SF3A3-203ENST00000461869 COG6Q9Y2V7 657 aa19.35■□□□□ 0.69
SF3A3-203ENST00000461869 RLBP1P12271 317 aa19.34■□□□□ 0.69
SF3A3-203ENST00000461869 GJA5P36382 358 aa19.34■□□□□ 0.69
SF3A3-203ENST00000461869 CRHR2Q13324 411 aa19.34■□□□□ 0.69
SF3A3-203ENST00000461869 BEND3Q5T5X7 828 aa19.34■□□□□ 0.69
SF3A3-203ENST00000461869 ANKRD13AQ8IZ07 590 aa19.34■□□□□ 0.69
SF3A3-203ENST00000461869 CNNM1Q9NRU3 951 aa19.34■□□□□ 0.69
SF3A3-203ENST00000461869 POTEFA5A3E0 1075 aa19.33■□□□□ 0.68
SF3A3-203ENST00000461869 EPHA10Q5JZY3 1008 aa19.33■□□□□ 0.68
SF3A3-203ENST00000461869 ITPRIPQ8IWB1 547 aa19.33■□□□□ 0.68
SF3A3-203ENST00000461869 CD99L2Q8TCZ2 262 aa19.33■□□□□ 0.68
SF3A3-203ENST00000461869 PTPN22Q9Y2R2 807 aa19.33■□□□□ 0.68
SF3A3-203ENST00000461869 ECM29Q5VYK3 1845 aa19.32■□□□□ 0.68
SF3A3-203ENST00000461869 TNFAIP1Q13829 316 aa19.32■□□□□ 0.68
SF3A3-203ENST00000461869 GCC1Q96CN9 775 aa19.32■□□□□ 0.68
SF3A3-203ENST00000461869 CCDC136Q96JN2 1154 aa19.32■□□□□ 0.68
SF3A3-203ENST00000461869 PTPN18Q99952 460 aa19.32■□□□□ 0.68
SF3A3-203ENST00000461869 TNNQ9UQP3 1299 aa19.32■□□□□ 0.68
SF3A3-203ENST00000461869 FAM205AQ6ZU69 1335 aa19.31■□□□□ 0.68
SF3A3-203ENST00000461869 TESPA1A2RU30 521 aaPredicted RBP19.31■□□□□ 0.68
SF3A3-203ENST00000461869 GRM8O00222 908 aa19.31■□□□□ 0.68
SF3A3-203ENST00000461869 MFSD14BQ5SR56 506 aa19.31■□□□□ 0.68
SF3A3-203ENST00000461869 TMEM57Q8N5G2 664 aa19.31■□□□□ 0.68
SF3A3-203ENST00000461869 TDRD7Q8NHU6 1098 aaKnown RBP19.31■□□□□ 0.68
SF3A3-203ENST00000461869 OPTNQ96CV9 577 aa19.31■□□□□ 0.68
SF3A3-203ENST00000461869 ELP3Q9H9T3 547 aa19.31■□□□□ 0.68
SF3A3-203ENST00000461869 EFCC1Q9HA90 598 aa19.31■□□□□ 0.68
SF3A3-203ENST00000461869 ZNF70Q9UC06 446 aaPredicted RBP19.31■□□□□ 0.68
SF3A3-203ENST00000461869 TTF2Q9UNY4 1162 aaKnown RBP19.31■□□□□ 0.68
SF3A3-203ENST00000461869 A0A1B0GUL6 1792 aa19.3■□□□□ 0.68
SF3A3-203ENST00000461869 SP3Q02447 781 aa19.3■□□□□ 0.68
SF3A3-203ENST00000461869 SPDYE2Q495Y8 402 aa19.3■□□□□ 0.68
SF3A3-203ENST00000461869 TDRD3Q9H7E2 651 aaKnown RBP19.3■□□□□ 0.68
SF3A3-203ENST00000461869 SERPINA10Q9UK55 444 aa19.3■□□□□ 0.68
SF3A3-203ENST00000461869 HIBADHP31937 336 aaKnown RBP19.29■□□□□ 0.68
SF3A3-203ENST00000461869 GYG1P46976 350 aa19.29■□□□□ 0.68
SF3A3-203ENST00000461869 C9orf78Q9NZ63 289 aaPredicted RBP19.29■□□□□ 0.68
SF3A3-203ENST00000461869 LAMB1P07942 1786 aa19.29■□□□□ 0.68
SF3A3-203ENST00000461869 UBE4AQ14139 1066 aa19.28■□□□□ 0.68
SF3A3-203ENST00000461869 FAM84BQ96KN1 310 aaPredicted RBP19.28■□□□□ 0.68
SF3A3-203ENST00000461869 TCP10L2B9ZVM9 353 aa19.27■□□□□ 0.68
SF3A3-203ENST00000461869 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.27■□□□□ 0.68
SF3A3-203ENST00000461869 CDAN1Q8IWY9 1227 aa19.27■□□□□ 0.68
SF3A3-203ENST00000461869 ARMC5Q96C12 935 aa19.27■□□□□ 0.68
SF3A3-203ENST00000461869 MS4A4AQ96JQ5 239 aa19.27■□□□□ 0.68
SF3A3-203ENST00000461869 TEPSINQ96N21 525 aa19.27■□□□□ 0.68
SF3A3-203ENST00000461869 EN2P19622 333 aaPredicted RBP19.26■□□□□ 0.67
SF3A3-203ENST00000461869 CRKP46108 304 aa19.26■□□□□ 0.67
SF3A3-203ENST00000461869 TNNI2P48788 182 aa19.26■□□□□ 0.67
SF3A3-203ENST00000461869 CAP1Q01518 475 aa19.26■□□□□ 0.67
SF3A3-203ENST00000461869 SLC4A10Q6U841 1118 aa19.26■□□□□ 0.67
SF3A3-203ENST00000461869 CNKSR2Q8WXI2 1034 aa19.26■□□□□ 0.67
SF3A3-203ENST00000461869 TMEM39BQ9GZU3 492 aa19.26■□□□□ 0.67
SF3A3-203ENST00000461869 ALDH1L1O75891 902 aa19.25■□□□□ 0.67
SF3A3-203ENST00000461869 MAP3K9P80192 1104 aa19.25■□□□□ 0.67
SF3A3-203ENST00000461869 VGLL4Q14135 290 aa19.25■□□□□ 0.67
SF3A3-203ENST00000461869 B4GALNT3Q6L9W6 998 aa19.25■□□□□ 0.67
SF3A3-203ENST00000461869 BRI3BPQ8WY22 251 aa19.25■□□□□ 0.67
SF3A3-203ENST00000461869 PUS3Q9BZE2 481 aaKnown RBP19.25■□□□□ 0.67
SF3A3-203ENST00000461869 ZFYVE28Q9HCC9 887 aa19.25■□□□□ 0.67
SF3A3-203ENST00000461869 CCL15-CCL14A0A0B4J2E2 113 aa19.24■□□□□ 0.67
SF3A3-203ENST00000461869 GTF2A2P52657 109 aa19.24■□□□□ 0.67
SF3A3-203ENST00000461869 ARHGEF6Q15052 776 aa19.24■□□□□ 0.67
SF3A3-203ENST00000461869 TAF1CQ15572 869 aaPredicted RBP19.24■□□□□ 0.67
SF3A3-203ENST00000461869 CCL15Q16663 113 aa19.24■□□□□ 0.67
SF3A3-203ENST00000461869 HABP4Q5JVS0 413 aaKnown RBP19.24■□□□□ 0.67
SF3A3-203ENST00000461869 VPS37DQ86XT2 251 aa19.24■□□□□ 0.67
SF3A3-203ENST00000461869 SRCIN1Q9C0H9 1055 aa19.24■□□□□ 0.67
SF3A3-203ENST00000461869 CSADQ9Y600 493 aa19.24■□□□□ 0.67
SF3A3-203ENST00000461869 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.23■□□□□ 0.67
SF3A3-203ENST00000461869 SUCLG2Q96I99 432 aa19.23■□□□□ 0.67
SF3A3-203ENST00000461869 TMEM106CQ9BVX2 250 aa19.23■□□□□ 0.67
SF3A3-203ENST00000461869 RIPOR2Q9Y4F9 1068 aa19.23■□□□□ 0.67
SF3A3-203ENST00000461869 MROH5Q6ZUA9 1318 aa19.23■□□□□ 0.67
SF3A3-203ENST00000461869 OTOFQ9HC10 1997 aa19.23■□□□□ 0.67
SF3A3-203ENST00000461869 CHAF1AQ13111 956 aaPredicted RBP19.22■□□□□ 0.67
SF3A3-203ENST00000461869 GRIK5Q16478 980 aa19.22■□□□□ 0.67
SF3A3-203ENST00000461869 NBPF11Q86T75 865 aa19.22■□□□□ 0.67
SF3A3-203ENST00000461869 OTUD5Q96G74 571 aa19.22■□□□□ 0.67
SF3A3-203ENST00000461869 KAZALD1Q96I82 304 aa19.22■□□□□ 0.67
SF3A3-203ENST00000461869 IQSEC3Q9UPP2 1182 aaPredicted RBP19.22■□□□□ 0.67
SF3A3-203ENST00000461869 FRAT2O75474 233 aaPredicted RBP19.21■□□□□ 0.67
SF3A3-203ENST00000461869 SLC9C1Q4G0N8 1177 aa19.21■□□□□ 0.67
SF3A3-203ENST00000461869 FBXO33Q7Z6M2 555 aa19.21■□□□□ 0.67
SF3A3-203ENST00000461869 FAM43AQ8N2R8 423 aa19.21■□□□□ 0.67
SF3A3-203ENST00000461869 ZNF333Q96JL9 665 aa19.21■□□□□ 0.67
SF3A3-203ENST00000461869 ZBTB40Q9NUA8 1239 aa19.21■□□□□ 0.67
SF3A3-203ENST00000461869 PTCH2Q9Y6C5 1203 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms