RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 DNAJC2Q99543 621 aaKnown RBP18.39■□□□□ 0.53
TMEM39A-203ENST00000461654 HAUS7Q99871 368 aa18.39■□□□□ 0.53
TMEM39A-203ENST00000461654 TSHZ2Q9NRE2 1034 aa18.39■□□□□ 0.53
TMEM39A-203ENST00000461654 GNL3LQ9NVN8 582 aaKnown RBP18.39■□□□□ 0.53
TMEM39A-203ENST00000461654 PSME4Q14997 1843 aa18.39■□□□□ 0.53
TMEM39A-203ENST00000461654 SPEF2Q9C093 1822 aa18.39■□□□□ 0.53
TMEM39A-203ENST00000461654 HIP1O00291 1037 aa18.38■□□□□ 0.53
TMEM39A-203ENST00000461654 CELF2O95319 508 aaKnown RBP18.38■□□□□ 0.53
TMEM39A-203ENST00000461654 RBM26Q5T8P6 1007 aaKnown RBP18.38■□□□□ 0.53
TMEM39A-203ENST00000461654 TBC1D9Q6ZT07 1266 aa18.38■□□□□ 0.53
TMEM39A-203ENST00000461654 SAPCD2Q86UD0 394 aa18.38■□□□□ 0.53
TMEM39A-203ENST00000461654 DCPSQ96C86 337 aaKnown RBP18.38■□□□□ 0.53
TMEM39A-203ENST00000461654 HHIPL1Q96JK4 782 aa18.38■□□□□ 0.53
TMEM39A-203ENST00000461654 ZNF512BQ96KM6 892 aaPredicted RBP18.38■□□□□ 0.53
TMEM39A-203ENST00000461654 MYO3BQ8WXR4 1341 aa18.38■□□□□ 0.53
TMEM39A-203ENST00000461654 TRPM7Q96QT4 1865 aa18.37■□□□□ 0.53
TMEM39A-203ENST00000461654 IFFO2Q5TF58 517 aa18.37■□□□□ 0.53
TMEM39A-203ENST00000461654 CCDC102BQ68D86 513 aa18.37■□□□□ 0.53
TMEM39A-203ENST00000461654 USP48Q86UV5 1035 aa18.37■□□□□ 0.53
TMEM39A-203ENST00000461654 VPS37DQ86XT2 251 aa18.37■□□□□ 0.53
TMEM39A-203ENST00000461654 WDR33Q9C0J8 1336 aaKnown RBP18.37■□□□□ 0.53
TMEM39A-203ENST00000461654 KLRK1P26718 216 aa18.36■□□□□ 0.53
TMEM39A-203ENST00000461654 ECE1P42892 770 aa18.36■□□□□ 0.53
TMEM39A-203ENST00000461654 LRRFIP1Q32MZ4 808 aaKnown RBP18.36■□□□□ 0.53
TMEM39A-203ENST00000461654 KRT26Q7Z3Y9 468 aa18.36■□□□□ 0.53
TMEM39A-203ENST00000461654 FSD1Q9BTV5 496 aa18.36■□□□□ 0.53
TMEM39A-203ENST00000461654 CD209Q9NNX6 404 aa18.36■□□□□ 0.53
TMEM39A-203ENST00000461654 MYOZ2Q9NPC6 264 aa18.36■□□□□ 0.53
TMEM39A-203ENST00000461654 DIAPH3Q9NSV4 1193 aa18.36■□□□□ 0.53
TMEM39A-203ENST00000461654 PAG1Q9NWQ8 432 aa18.36■□□□□ 0.53
TMEM39A-203ENST00000461654 TTLL5Q6EMB2 1281 aa18.35■□□□□ 0.53
TMEM39A-203ENST00000461654 RUFY2Q8WXA3 655 aa18.35■□□□□ 0.53
TMEM39A-203ENST00000461654 WBP1LQ9NX94 342 aa18.35■□□□□ 0.53
TMEM39A-203ENST00000461654 SNAP23O00161 211 aa18.34■□□□□ 0.53
TMEM39A-203ENST00000461654 GOLIM4O00461 696 aa18.34■□□□□ 0.53
TMEM39A-203ENST00000461654 IL1R1P14778 569 aa18.34■□□□□ 0.53
TMEM39A-203ENST00000461654 CHMLP26374 656 aa18.34■□□□□ 0.53
TMEM39A-203ENST00000461654 ARID4AP29374 1257 aaPredicted RBP18.34■□□□□ 0.53
TMEM39A-203ENST00000461654 PHKA1P46020 1223 aa18.34■□□□□ 0.53
TMEM39A-203ENST00000461654 SCARF1Q14162 830 aa18.34■□□□□ 0.53
TMEM39A-203ENST00000461654 TICAM2Q86XR7 235 aa18.34■□□□□ 0.53
TMEM39A-203ENST00000461654 SULF1Q8IWU6 871 aa18.34■□□□□ 0.53
TMEM39A-203ENST00000461654 OGFOD1Q8N543 542 aa18.34■□□□□ 0.53
TMEM39A-203ENST00000461654 PITPNM2Q9BZ72 1349 aa18.33■□□□□ 0.53
TMEM39A-203ENST00000461654 MFAP1P55081 439 aaKnown RBP18.33■□□□□ 0.52
TMEM39A-203ENST00000461654 MAP2K1Q02750 393 aaPredicted RBP18.33■□□□□ 0.52
TMEM39A-203ENST00000461654 TTF1Q15361 905 aaPredicted RBP18.33■□□□□ 0.52
TMEM39A-203ENST00000461654 COL13A1Q5TAT6 717 aaPredicted RBP18.33■□□□□ 0.52
TMEM39A-203ENST00000461654 CAPNS2Q96L46 248 aa18.33■□□□□ 0.52
TMEM39A-203ENST00000461654 GGA3Q9NZ52 723 aa18.33■□□□□ 0.52
TMEM39A-203ENST00000461654 ARAP2Q8WZ64 1704 aa18.32■□□□□ 0.52
TMEM39A-203ENST00000461654 REC8O95072 547 aa18.32■□□□□ 0.52
TMEM39A-203ENST00000461654 MAP2K2P36507 400 aa18.32■□□□□ 0.52
TMEM39A-203ENST00000461654 BCAMP50895 628 aa18.32■□□□□ 0.52
TMEM39A-203ENST00000461654 GTF2IP78347 998 aa18.32■□□□□ 0.52
TMEM39A-203ENST00000461654 KBTBD3Q8NAB2 608 aa18.32■□□□□ 0.52
TMEM39A-203ENST00000461654 MXD3Q9BW11 206 aa18.32■□□□□ 0.52
TMEM39A-203ENST00000461654 SNRKQ9NRH2 765 aa18.32■□□□□ 0.52
TMEM39A-203ENST00000461654 RFX7Q2KHR2 1363 aa18.31■□□□□ 0.52
TMEM39A-203ENST00000461654 ASTN2O75129 1339 aaPredicted RBP18.31■□□□□ 0.52
TMEM39A-203ENST00000461654 ZNF646O15015 1829 aaPredicted RBP18.31■□□□□ 0.52
TMEM39A-203ENST00000461654 ADM5C9JUS6 153 aa18.31■□□□□ 0.52
TMEM39A-203ENST00000461654 SEMA3EO15041 775 aa18.31■□□□□ 0.52
TMEM39A-203ENST00000461654 FRAT2O75474 233 aaPredicted RBP18.31■□□□□ 0.52
TMEM39A-203ENST00000461654 HIBADHP31937 336 aaKnown RBP18.31■□□□□ 0.52
TMEM39A-203ENST00000461654 GYG1P46976 350 aa18.31■□□□□ 0.52
TMEM39A-203ENST00000461654 FKBP1AP62942 108 aaKnown RBP18.31■□□□□ 0.52
TMEM39A-203ENST00000461654 ANGEL2Q5VTE6 544 aaKnown RBP18.31■□□□□ 0.52
TMEM39A-203ENST00000461654 CYP4F22Q6NT55 531 aa18.31■□□□□ 0.52
TMEM39A-203ENST00000461654 DLK2Q6UY11 383 aa18.31■□□□□ 0.52
TMEM39A-203ENST00000461654 ZNF804AQ7Z570 1209 aa18.31■□□□□ 0.52
TMEM39A-203ENST00000461654 SPATA5Q8NB90 893 aa18.31■□□□□ 0.52
TMEM39A-203ENST00000461654 ZNF408Q9H9D4 720 aa18.31■□□□□ 0.52
TMEM39A-203ENST00000461654 FOXN1O15353 648 aa18.3■□□□□ 0.52
TMEM39A-203ENST00000461654 SEC24BO95487 1268 aa18.3■□□□□ 0.52
TMEM39A-203ENST00000461654 MCAMP43121 646 aa18.3■□□□□ 0.52
TMEM39A-203ENST00000461654 ZAP70P43403 619 aa18.3■□□□□ 0.52
TMEM39A-203ENST00000461654 ZSCAN25Q6NSZ9 544 aa18.3■□□□□ 0.52
TMEM39A-203ENST00000461654 FAM84BQ96KN1 310 aaPredicted RBP18.3■□□□□ 0.52
TMEM39A-203ENST00000461654 ESYT1Q9BSJ8 1104 aa18.3■□□□□ 0.52
TMEM39A-203ENST00000461654 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.3■□□□□ 0.52
TMEM39A-203ENST00000461654 DENND2AQ9ULE3 1009 aa18.3■□□□□ 0.52
TMEM39A-203ENST00000461654 NDUFB9Q9Y6M9 179 aa18.3■□□□□ 0.52
TMEM39A-203ENST00000461654 PCNTO95613 3336 aa18.3■□□□□ 0.52
TMEM39A-203ENST00000461654 WNT10BO00744 389 aa18.29■□□□□ 0.52
TMEM39A-203ENST00000461654 FBXO33Q7Z6M2 555 aa18.29■□□□□ 0.52
TMEM39A-203ENST00000461654 C2orf69Q8N8R5 385 aa18.29■□□□□ 0.52
TMEM39A-203ENST00000461654 FBXW7Q969H0 707 aa18.29■□□□□ 0.52
TMEM39A-203ENST00000461654 AIDAQ96BJ3 306 aa18.29■□□□□ 0.52
TMEM39A-203ENST00000461654 EDC3Q96F86 508 aaKnown RBP18.29■□□□□ 0.52
TMEM39A-203ENST00000461654 ZBED3Q96IU2 234 aaPredicted RBP18.29■□□□□ 0.52
TMEM39A-203ENST00000461654 GBA2Q9HCG7 927 aaPredicted RBP18.29■□□□□ 0.52
TMEM39A-203ENST00000461654 PRDM10Q9NQV6 1147 aa18.29■□□□□ 0.52
TMEM39A-203ENST00000461654 HMG20BQ9P0W2 317 aa18.29■□□□□ 0.52
TMEM39A-203ENST00000461654 HDAC9Q9UKV0 1011 aa18.29■□□□□ 0.52
TMEM39A-203ENST00000461654 THSD7BQ9C0I4 1608 aa18.29■□□□□ 0.52
TMEM39A-203ENST00000461654 A0A1B0GUL6 1792 aa18.29■□□□□ 0.52
TMEM39A-203ENST00000461654 ZFYP08048 801 aaPredicted RBP18.28■□□□□ 0.52
TMEM39A-203ENST00000461654 CTCFP49711 727 aaPredicted RBP18.28■□□□□ 0.52
TMEM39A-203ENST00000461654 RASGRF1Q13972 1273 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms