RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 ZGPATQ8N5A5 531 aaKnown RBP13.74□□□□□ -0.21
SSBP1-202ENST00000461433 DNAJC2Q99543 621 aaKnown RBP13.74□□□□□ -0.21
SSBP1-202ENST00000461433 AOX1Q06278 1338 aa13.73□□□□□ -0.21
SSBP1-202ENST00000461433 MYH2Q9UKX2 1941 aa13.73□□□□□ -0.21
SSBP1-202ENST00000461433 IQCA1LA6NCM1 817 aa13.73□□□□□ -0.21
SSBP1-202ENST00000461433 GOLIM4O00461 696 aa13.73□□□□□ -0.21
SSBP1-202ENST00000461433 GLRX3O76003 335 aaKnown RBP13.73□□□□□ -0.21
SSBP1-202ENST00000461433 LDHBP07195 334 aaKnown RBP13.73□□□□□ -0.21
SSBP1-202ENST00000461433 LMOD1P29536 600 aaPredicted RBP13.73□□□□□ -0.21
SSBP1-202ENST00000461433 EPHX2P34913 555 aa13.73□□□□□ -0.21
SSBP1-202ENST00000461433 HIRAP54198 1017 aaPredicted RBP13.73□□□□□ -0.21
SSBP1-202ENST00000461433 MRIQ9BWK5 157 aa13.73□□□□□ -0.21
SSBP1-202ENST00000461433 GPBP1L1Q9HC44 474 aaPredicted RBP13.73□□□□□ -0.21
SSBP1-202ENST00000461433 MYOZ2Q9NPC6 264 aa13.73□□□□□ -0.21
SSBP1-202ENST00000461433 PAG1Q9NWQ8 432 aa13.73□□□□□ -0.21
SSBP1-202ENST00000461433 PCDHAC2Q9Y5I4 1007 aa13.73□□□□□ -0.21
SSBP1-202ENST00000461433 H7C1D1 291 aa13.72□□□□□ -0.21
SSBP1-202ENST00000461433 ERC2O15083 957 aa13.72□□□□□ -0.21
SSBP1-202ENST00000461433 MMP14P50281 582 aa13.72□□□□□ -0.21
SSBP1-202ENST00000461433 MECOMQ03112 1051 aa13.72□□□□□ -0.21
SSBP1-202ENST00000461433 SPTY2D1Q68D10 685 aaPredicted RBP13.72□□□□□ -0.21
SSBP1-202ENST00000461433 ERICH6Q7L0X2 663 aa13.72□□□□□ -0.21
SSBP1-202ENST00000461433 OGFOD1Q8N543 542 aa13.72□□□□□ -0.21
SSBP1-202ENST00000461433 TRPM4Q8TD43 1214 aa13.72□□□□□ -0.21
SSBP1-202ENST00000461433 NSUN4Q96CB9 384 aaKnown RBP13.72□□□□□ -0.21
SSBP1-202ENST00000461433 ZBED3Q96IU2 234 aaPredicted RBP13.72□□□□□ -0.21
SSBP1-202ENST00000461433 ADARB2Q9NS39 739 aaKnown RBP13.72□□□□□ -0.21
SSBP1-202ENST00000461433 MAST2Q6P0Q8 1798 aa13.72□□□□□ -0.21
SSBP1-202ENST00000461433 KIF3CO14782 793 aa13.72□□□□□ -0.21
SSBP1-202ENST00000461433 MAP4K4O95819 1239 aaPredicted RBP13.72□□□□□ -0.21
SSBP1-202ENST00000461433 HDLBPQ00341 1268 aaKnown RBP13.72□□□□□ -0.21
SSBP1-202ENST00000461433 DIXDC1Q155Q3 683 aa13.72□□□□□ -0.21
SSBP1-202ENST00000461433 TBC1D10BQ4KMP7 808 aaPredicted RBP13.72□□□□□ -0.21
SSBP1-202ENST00000461433 MTMR14Q8NCE2 650 aa13.72□□□□□ -0.21
SSBP1-202ENST00000461433 LRP2BPQ9P2M1 347 aa13.72□□□□□ -0.21
SSBP1-202ENST00000461433 SERPINA10Q9UK55 444 aa13.72□□□□□ -0.21
SSBP1-202ENST00000461433 HDAC9Q9UKV0 1011 aa13.72□□□□□ -0.21
SSBP1-202ENST00000461433 MYH7P12883 1935 aa13.71□□□□□ -0.21
SSBP1-202ENST00000461433 ECM29Q5VYK3 1845 aa13.71□□□□□ -0.21
SSBP1-202ENST00000461433 POTEIP0CG38 1075 aa13.71□□□□□ -0.21
SSBP1-202ENST00000461433 POTEJP0CG39 1038 aa13.71□□□□□ -0.21
SSBP1-202ENST00000461433 CRKP46108 304 aa13.71□□□□□ -0.21
SSBP1-202ENST00000461433 TTF1Q15361 905 aaPredicted RBP13.71□□□□□ -0.21
SSBP1-202ENST00000461433 RBM26Q5T8P6 1007 aaKnown RBP13.71□□□□□ -0.21
SSBP1-202ENST00000461433 MAST3O60307 1309 aa13.7□□□□□ -0.22
SSBP1-202ENST00000461433 WNT10BO00744 389 aa13.7□□□□□ -0.22
SSBP1-202ENST00000461433 KIF4BQ2VIQ3 1234 aa13.7□□□□□ -0.22
SSBP1-202ENST00000461433 CFAP100Q494V2 611 aa13.7□□□□□ -0.22
SSBP1-202ENST00000461433 HHIPL2Q6UWX4 724 aa13.7□□□□□ -0.22
SSBP1-202ENST00000461433 USP50Q70EL3 339 aaPredicted RBP13.7□□□□□ -0.22
SSBP1-202ENST00000461433 FAM163AQ96GL9 167 aaPredicted RBP13.7□□□□□ -0.22
SSBP1-202ENST00000461433 PRMT6Q96LA8 375 aaPredicted RBP13.7□□□□□ -0.22
SSBP1-202ENST00000461433 RAI14Q9P0K7 980 aa13.7□□□□□ -0.22
SSBP1-202ENST00000461433 POLR2AP24928 1970 aaKnown RBP13.7□□□□□ -0.22
SSBP1-202ENST00000461433 IGSF3O75054 1194 aa13.69□□□□□ -0.22
SSBP1-202ENST00000461433 IDH1O75874 414 aaKnown RBP13.69□□□□□ -0.22
SSBP1-202ENST00000461433 NBPF9Q3BBW0 867 aa13.69□□□□□ -0.22
SSBP1-202ENST00000461433 ADGRA1Q86SQ6 560 aa13.69□□□□□ -0.22
SSBP1-202ENST00000461433 DZIP1Q86YF9 867 aaKnown RBP13.69□□□□□ -0.22
SSBP1-202ENST00000461433 TEKT1Q969V4 418 aa13.69□□□□□ -0.22
SSBP1-202ENST00000461433 ZDHHC15Q96MV8 337 aa13.69□□□□□ -0.22
SSBP1-202ENST00000461433 DAGLAQ9Y4D2 1042 aa13.69□□□□□ -0.22
SSBP1-202ENST00000461433 GAKO14976 1311 aa13.69□□□□□ -0.22
SSBP1-202ENST00000461433 ASTN2O75129 1339 aaPredicted RBP13.69□□□□□ -0.22
SSBP1-202ENST00000461433 SPDYE2BA6NHP3 402 aa13.69□□□□□ -0.22
SSBP1-202ENST00000461433 CHGBP05060 677 aa13.69□□□□□ -0.22
SSBP1-202ENST00000461433 SPDYE6P0CI01 402 aa13.69□□□□□ -0.22
SSBP1-202ENST00000461433 MAP3K12Q12852 859 aa13.69□□□□□ -0.22
SSBP1-202ENST00000461433 DLGAP5Q15398 846 aa13.69□□□□□ -0.22
SSBP1-202ENST00000461433 APOBEC3HQ6NTF7 200 aaKnown RBP13.69□□□□□ -0.22
SSBP1-202ENST00000461433 PNMA8AQ86V59 439 aaPredicted RBP13.69□□□□□ -0.22
SSBP1-202ENST00000461433 KBTBD3Q8NAB2 608 aa13.69□□□□□ -0.22
SSBP1-202ENST00000461433 PGAP2Q9UHJ9 254 aa13.69□□□□□ -0.22
SSBP1-202ENST00000461433 GTF3C3Q9Y5Q9 886 aa13.69□□□□□ -0.22
SSBP1-202ENST00000461433 TCRBV5S4A2TA0A5A2 114 aa13.68□□□□□ -0.22
SSBP1-202ENST00000461433 GSPT1P15170 499 aaKnown RBP13.68□□□□□ -0.22
SSBP1-202ENST00000461433 SLFNL1Q499Z3 407 aa13.68□□□□□ -0.22
SSBP1-202ENST00000461433 EAPPQ56P03 285 aaPredicted RBP13.68□□□□□ -0.22
SSBP1-202ENST00000461433 TTC22Q5TAA0 569 aa13.68□□□□□ -0.22
SSBP1-202ENST00000461433 NAA16Q6N069 864 aaPredicted RBP13.68□□□□□ -0.22
SSBP1-202ENST00000461433 MAGEB6Q8N7X4 407 aa13.68□□□□□ -0.22
SSBP1-202ENST00000461433 AK9Q5TCS8 1911 aa13.68□□□□□ -0.22
SSBP1-202ENST00000461433 MROH7-TTC4A0A0A0MT08 1334 aa13.68□□□□□ -0.22
SSBP1-202ENST00000461433 PDE6AP16499 860 aa13.67□□□□□ -0.22
SSBP1-202ENST00000461433 RBM5P52756 815 aaKnown RBP eCLIP13.67□□□□□ -0.22
SSBP1-202ENST00000461433 SLC9C2Q5TAH2 1124 aa13.67□□□□□ -0.22
SSBP1-202ENST00000461433 GPR75-ASB3A0A0A6YYF3 556 aa13.66□□□□□ -0.22
SSBP1-202ENST00000461433 CYP7A1P22680 504 aa13.66□□□□□ -0.22
SSBP1-202ENST00000461433 ADD2P35612 726 aa13.66□□□□□ -0.22
SSBP1-202ENST00000461433 GSTO1P78417 241 aa13.66□□□□□ -0.22
SSBP1-202ENST00000461433 SLF2Q8IX21 1173 aa13.66□□□□□ -0.22
SSBP1-202ENST00000461433 ZC3H15Q8WU90 426 aaKnown RBP13.66□□□□□ -0.22
SSBP1-202ENST00000461433 EVI5LQ96CN4 794 aa13.66□□□□□ -0.22
SSBP1-202ENST00000461433 TDRD3Q9H7E2 651 aaKnown RBP13.66□□□□□ -0.22
SSBP1-202ENST00000461433 ZNF532Q9HCE3 1301 aa13.66□□□□□ -0.22
SSBP1-202ENST00000461433 LDHCP07864 332 aa13.66□□□□□ -0.22
SSBP1-202ENST00000461433 RGS3P49796 1198 aa13.66□□□□□ -0.22
SSBP1-202ENST00000461433 TMED8Q6PL24 325 aaPredicted RBP13.66□□□□□ -0.22
SSBP1-202ENST00000461433 LDHDQ86WU2 507 aa13.66□□□□□ -0.22
SSBP1-202ENST00000461433 CDK5RAP2Q96SN8 1893 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 278.7 ms