RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 KIF23Q02241 960 aaPredicted RBP19.07■□□□□ 0.64
VARS-219ENST00000461328 TSKSQ9UJT2 592 aa19.07■□□□□ 0.64
VARS-219ENST00000461328 PPP2R3BQ9Y5P8 575 aa19.07■□□□□ 0.64
VARS-219ENST00000461328 AOX1Q06278 1338 aa19.06■□□□□ 0.64
VARS-219ENST00000461328 CRKP46108 304 aa19.06■□□□□ 0.64
VARS-219ENST00000461328 PRKG1Q13976 671 aa19.06■□□□□ 0.64
VARS-219ENST00000461328 GRIK5Q16478 980 aa19.06■□□□□ 0.64
VARS-219ENST00000461328 ARMC9Q7Z3E5 817 aa19.06■□□□□ 0.64
VARS-219ENST00000461328 RASAL3Q86YV0 1011 aa19.06■□□□□ 0.64
VARS-219ENST00000461328 PNMA6EA0A0J9YXQ4 647 aa19.05■□□□□ 0.64
VARS-219ENST00000461328 TDRD3Q9H7E2 651 aaKnown RBP19.05■□□□□ 0.64
VARS-219ENST00000461328 GNL3LQ9NVN8 582 aaKnown RBP19.05■□□□□ 0.64
VARS-219ENST00000461328 ZNF70Q9UC06 446 aaPredicted RBP19.05■□□□□ 0.64
VARS-219ENST00000461328 G3BP1Q13283 466 aaKnown RBP eCLIP19.04■□□□□ 0.643e-7■■■■□ 22
VARS-219ENST00000461328 OS9Q13438 667 aaPredicted RBP19.04■□□□□ 0.64
VARS-219ENST00000461328 TNFAIP1Q13829 316 aa19.04■□□□□ 0.64
VARS-219ENST00000461328 SPDYE2Q495Y8 402 aa19.04■□□□□ 0.64
VARS-219ENST00000461328 WDR66Q8TBY9 1149 aa19.04■□□□□ 0.64
VARS-219ENST00000461328 TEKT1Q969V4 418 aa19.04■□□□□ 0.64
VARS-219ENST00000461328 ANGEL1Q9UNK9 670 aaKnown RBP19.04■□□□□ 0.64
VARS-219ENST00000461328 SUGT1Q9Y2Z0 365 aa19.04■□□□□ 0.64
VARS-219ENST00000461328 MAST3O60307 1309 aa19.03■□□□□ 0.64
VARS-219ENST00000461328 ZBTB7BO15156 539 aaPredicted RBP19.03■□□□□ 0.64
VARS-219ENST00000461328 HDLBPQ00341 1268 aaKnown RBP19.03■□□□□ 0.64
VARS-219ENST00000461328 RASA3Q14644 834 aa19.03■□□□□ 0.64
VARS-219ENST00000461328 SUPT20HL1Q3ZLR7 823 aa19.03■□□□□ 0.64
VARS-219ENST00000461328 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.03■□□□□ 0.64
VARS-219ENST00000461328 PPP1R12BO60237 982 aaPredicted RBP19.02■□□□□ 0.64
VARS-219ENST00000461328 CAPN15O75808 1086 aa19.02■□□□□ 0.64
VARS-219ENST00000461328 TFCP2Q12800 502 aa19.02■□□□□ 0.64
VARS-219ENST00000461328 AKAP2Q9Y2D5 859 aa19.02■□□□□ 0.64
VARS-219ENST00000461328 MYH13Q9UKX3 1938 aa19.02■□□□□ 0.63
VARS-219ENST00000461328 ADORA1P30542 326 aa19.01■□□□□ 0.63
VARS-219ENST00000461328 PHKA1P46020 1223 aa19.01■□□□□ 0.63
VARS-219ENST00000461328 TNNI2P48788 182 aa19.01■□□□□ 0.63
VARS-219ENST00000461328 MVPQ14764 893 aaKnown RBP19.01■□□□□ 0.63
VARS-219ENST00000461328 REM2Q8IYK8 340 aaPredicted RBP19.01■□□□□ 0.63
VARS-219ENST00000461328 FZD1Q9UP38 647 aa19.01■□□□□ 0.63
VARS-219ENST00000461328 COG6Q9Y2V7 657 aa19.01■□□□□ 0.63
VARS-219ENST00000461328 SSC5DA1L4H1 1573 aa19.01■□□□□ 0.63
VARS-219ENST00000461328 A0A1B0GUL7 405 aa19■□□□□ 0.63
VARS-219ENST00000461328 TCP10L2B9ZVM9 353 aa19■□□□□ 0.63
VARS-219ENST00000461328 SEMA3EO15041 775 aa19■□□□□ 0.63
VARS-219ENST00000461328 TIMM10P62072 90 aa19■□□□□ 0.63
VARS-219ENST00000461328 ATP8B2P98198 1209 aa19■□□□□ 0.63
VARS-219ENST00000461328 LDLRAD1Q5T700 205 aa19■□□□□ 0.63
VARS-219ENST00000461328 NBPF12Q5TAG4 269 aaPredicted RBP19■□□□□ 0.63
VARS-219ENST00000461328 ZDHHC15Q96MV8 337 aa19■□□□□ 0.63
VARS-219ENST00000461328 CSRNP1Q96S65 589 aa19■□□□□ 0.63
VARS-219ENST00000461328 DENND2AQ9ULE3 1009 aa19■□□□□ 0.63
VARS-219ENST00000461328 MKRN3Q13064 507 aaKnown RBP18.99■□□□□ 0.63
VARS-219ENST00000461328 POLA2Q14181 598 aa18.99■□□□□ 0.63
VARS-219ENST00000461328 CCDC102BQ68D86 513 aa18.99■□□□□ 0.63
VARS-219ENST00000461328 NEUROD6Q96NK8 337 aa18.99■□□□□ 0.63
VARS-219ENST00000461328 MRIQ9BWK5 157 aa18.99■□□□□ 0.63
VARS-219ENST00000461328 SAGE1Q9NXZ1 904 aa18.99■□□□□ 0.63
VARS-219ENST00000461328 TMOD2Q9NZR1 351 aa18.99■□□□□ 0.63
VARS-219ENST00000461328 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.99■□□□□ 0.63
VARS-219ENST00000461328 DDX19BQ9UMR2 479 aa18.99■□□□□ 0.63
VARS-219ENST00000461328 SURF6O75683 361 aaKnown RBP18.98■□□□□ 0.63
VARS-219ENST00000461328 MAP3K11Q16584 847 aa18.98■□□□□ 0.63
VARS-219ENST00000461328 GORABQ5T7V8 394 aa18.98■□□□□ 0.63
VARS-219ENST00000461328 SSH3Q8TE77 659 aa18.98■□□□□ 0.63
VARS-219ENST00000461328 RNF186Q9NXI6 227 aa18.98■□□□□ 0.63
VARS-219ENST00000461328 TRPA1O75762 1119 aa18.97■□□□□ 0.63
VARS-219ENST00000461328 LDHBP07195 334 aaKnown RBP18.97■□□□□ 0.63
VARS-219ENST00000461328 IREB2P48200 963 aaKnown RBP18.97■□□□□ 0.63
VARS-219ENST00000461328 CACNB3P54284 484 aa18.97■□□□□ 0.63
VARS-219ENST00000461328 CEP85Q6P2H3 762 aa18.97■□□□□ 0.63
VARS-219ENST00000461328 HHIPL2Q6UWX4 724 aa18.97■□□□□ 0.63
VARS-219ENST00000461328 SLC10A4Q96EP9 437 aa18.97■□□□□ 0.63
VARS-219ENST00000461328 XAGE2Q96GT9 111 aa18.97■□□□□ 0.63
VARS-219ENST00000461328 CHMP4BQ9H444 224 aaKnown RBP18.97■□□□□ 0.63
VARS-219ENST00000461328 PRDX5P30044 214 aa18.96■□□□□ 0.63
VARS-219ENST00000461328 APOBEC3HQ6NTF7 200 aaKnown RBP18.96■□□□□ 0.63
VARS-219ENST00000461328 TMEM39BQ9GZU3 492 aa18.96■□□□□ 0.63
VARS-219ENST00000461328 SALL1Q9NSC2 1324 aa18.96■□□□□ 0.63
VARS-219ENST00000461328 SREBF2Q12772 1141 aa18.95■□□□□ 0.62
VARS-219ENST00000461328 RASGRF1Q13972 1273 aa18.95■□□□□ 0.62
VARS-219ENST00000461328 SPRYD7Q5W111 196 aa18.95■□□□□ 0.62
VARS-219ENST00000461328 CDAN1Q8IWY9 1227 aa18.95■□□□□ 0.62
VARS-219ENST00000461328 ZGPATQ8N5A5 531 aaKnown RBP18.95■□□□□ 0.62
VARS-219ENST00000461328 CLMNQ96JQ2 1002 aa18.95■□□□□ 0.62
VARS-219ENST00000461328 TEPSINQ96N21 525 aa18.95■□□□□ 0.62
VARS-219ENST00000461328 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.95■□□□□ 0.62
VARS-219ENST00000461328 AKAP11Q9UKA4 1901 aa18.95■□□□□ 0.62
VARS-219ENST00000461328 UNCXA6NJT0 531 aa18.94■□□□□ 0.62
VARS-219ENST00000461328 ZBTB22O15209 634 aa18.94■□□□□ 0.62
VARS-219ENST00000461328 USP2O75604 605 aaPredicted RBP18.94■□□□□ 0.62
VARS-219ENST00000461328 DIXDC1Q155Q3 683 aa18.94■□□□□ 0.62
VARS-219ENST00000461328 C20orf194Q5TEA3 1177 aa18.94■□□□□ 0.62
VARS-219ENST00000461328 ANKRD13AQ8IZ07 590 aa18.94■□□□□ 0.62
VARS-219ENST00000461328 DAGLAQ9Y4D2 1042 aa18.94■□□□□ 0.62
VARS-219ENST00000461328 PDE3AQ14432 1141 aa18.93■□□□□ 0.62
VARS-219ENST00000461328 FKBP1CQ5VVH2 108 aa18.93■□□□□ 0.62
VARS-219ENST00000461328 FAM83AQ86UY5 434 aa18.93■□□□□ 0.62
VARS-219ENST00000461328 PDS5AQ29RF7 1337 aaKnown RBP18.93■□□□□ 0.62
VARS-219ENST00000461328 HMMRO75330 724 aa18.92■□□□□ 0.62
VARS-219ENST00000461328 TM4SF4P48230 202 aa18.92■□□□□ 0.62
VARS-219ENST00000461328 DZIP1Q86YF9 867 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms