RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 MRIQ9BWK5 157 aa18.4■□□□□ 0.54
DNMT3A-207ENST00000461228 EFCC1Q9HA90 598 aa18.4■□□□□ 0.54
DNMT3A-207ENST00000461228 TTF2Q9UNY4 1162 aaKnown RBP18.4■□□□□ 0.54
DNMT3A-207ENST00000461228 FZD1Q9UP38 647 aa18.4■□□□□ 0.54
DNMT3A-207ENST00000461228 CHMP3Q9Y3E7 222 aa18.4■□□□□ 0.54
DNMT3A-207ENST00000461228 F6X3S4 739 aa18.39■□□□□ 0.53
DNMT3A-207ENST00000461228 F8W031 263 aaPredicted RBP18.39■□□□□ 0.53
DNMT3A-207ENST00000461228 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.39■□□□□ 0.53
DNMT3A-207ENST00000461228 FAM83AQ86UY5 434 aa18.39■□□□□ 0.53
DNMT3A-207ENST00000461228 DZIP1LQ8IYY4 767 aaKnown RBP18.39■□□□□ 0.53
DNMT3A-207ENST00000461228 FAM84BQ96KN1 310 aaPredicted RBP18.39■□□□□ 0.53
DNMT3A-207ENST00000461228 PTPN18Q99952 460 aa18.39■□□□□ 0.53
DNMT3A-207ENST00000461228 SRCIN1Q9C0H9 1055 aa18.39■□□□□ 0.53
DNMT3A-207ENST00000461228 SPDYE5A6NIY4 337 aa18.38■□□□□ 0.53
DNMT3A-207ENST00000461228 GNRH1P01148 92 aa18.38■□□□□ 0.53
DNMT3A-207ENST00000461228 RBM5P52756 815 aaKnown RBP eCLIP18.38■□□□□ 0.53
DNMT3A-207ENST00000461228 VGLL4Q14135 290 aa18.38■□□□□ 0.53
DNMT3A-207ENST00000461228 ZNF333Q96JL9 665 aa18.38■□□□□ 0.53
DNMT3A-207ENST00000461228 C9orf78Q9NZ63 289 aaPredicted RBP18.38■□□□□ 0.53
DNMT3A-207ENST00000461228 RIPOR2Q9Y4F9 1068 aa18.38■□□□□ 0.53
DNMT3A-207ENST00000461228 RANBP2P49792 3224 aaKnown RBP18.38■□□□□ 0.53
DNMT3A-207ENST00000461228 ZBTB22O15209 634 aa18.37■□□□□ 0.53
DNMT3A-207ENST00000461228 CRKP46108 304 aa18.37■□□□□ 0.53
DNMT3A-207ENST00000461228 VGLL2Q8N8G2 317 aa18.37■□□□□ 0.53
DNMT3A-207ENST00000461228 CD99L2Q8TCZ2 262 aa18.37■□□□□ 0.53
DNMT3A-207ENST00000461228 BRI3BPQ8WY22 251 aa18.37■□□□□ 0.53
DNMT3A-207ENST00000461228 KAZALD1Q96I82 304 aa18.37■□□□□ 0.53
DNMT3A-207ENST00000461228 MRS2Q9HD23 443 aa18.37■□□□□ 0.53
DNMT3A-207ENST00000461228 CSADQ9Y600 493 aa18.37■□□□□ 0.53
DNMT3A-207ENST00000461228 POTEFA5A3E0 1075 aa18.36■□□□□ 0.53
DNMT3A-207ENST00000461228 ZSWIM8A7E2V4 1837 aa18.36■□□□□ 0.53
DNMT3A-207ENST00000461228 WDHD1O75717 1129 aaPredicted RBP18.36■□□□□ 0.53
DNMT3A-207ENST00000461228 FBXO33Q7Z6M2 555 aa18.36■□□□□ 0.53
DNMT3A-207ENST00000461228 ZNF594Q96JF6 807 aaPredicted RBP18.36■□□□□ 0.53
DNMT3A-207ENST00000461228 ZDHHC15Q96MV8 337 aa18.36■□□□□ 0.53
DNMT3A-207ENST00000461228 ZFYVE28Q9HCC9 887 aa18.36■□□□□ 0.53
DNMT3A-207ENST00000461228 PTPRFP10586 1907 aa18.35■□□□□ 0.53
DNMT3A-207ENST00000461228 PTPRCP08575 1304 aa18.35■□□□□ 0.53
DNMT3A-207ENST00000461228 ZNF521Q96K83 1311 aa18.35■□□□□ 0.53
DNMT3A-207ENST00000461228 GYG1P46976 350 aa18.35■□□□□ 0.53
DNMT3A-207ENST00000461228 PRMT2P55345 433 aa18.35■□□□□ 0.53
DNMT3A-207ENST00000461228 MAP3K9P80192 1104 aa18.35■□□□□ 0.53
DNMT3A-207ENST00000461228 TEKT1Q969V4 418 aa18.35■□□□□ 0.53
DNMT3A-207ENST00000461228 TDRD3Q9H7E2 651 aaKnown RBP18.35■□□□□ 0.53
DNMT3A-207ENST00000461228 ELP3Q9H9T3 547 aa18.35■□□□□ 0.53
DNMT3A-207ENST00000461228 CCL15-CCL14A0A0B4J2E2 113 aa18.34■□□□□ 0.53
DNMT3A-207ENST00000461228 TAF1CQ15572 869 aaPredicted RBP18.34■□□□□ 0.53
DNMT3A-207ENST00000461228 CCL15Q16663 113 aa18.34■□□□□ 0.53
DNMT3A-207ENST00000461228 CAVIN4Q5BKX8 364 aa18.34■□□□□ 0.53
DNMT3A-207ENST00000461228 NBPF11Q86T75 865 aa18.34■□□□□ 0.53
DNMT3A-207ENST00000461228 ERO1BQ86YB8 467 aa18.34■□□□□ 0.53
DNMT3A-207ENST00000461228 SUCLG2Q96I99 432 aa18.34■□□□□ 0.53
DNMT3A-207ENST00000461228 TMEM39BQ9GZU3 492 aa18.34■□□□□ 0.53
DNMT3A-207ENST00000461228 TMOD2Q9NZR1 351 aa18.34■□□□□ 0.53
DNMT3A-207ENST00000461228 MGAMO43451 1857 aa18.33■□□□□ 0.53
DNMT3A-207ENST00000461228 TLR2O60603 784 aa18.33■□□□□ 0.52
DNMT3A-207ENST00000461228 PDE8BO95263 885 aa18.33■□□□□ 0.52
DNMT3A-207ENST00000461228 CETPP11597 493 aa18.33■□□□□ 0.52
DNMT3A-207ENST00000461228 HHIPL2Q6UWX4 724 aa18.33■□□□□ 0.52
DNMT3A-207ENST00000461228 JAG2Q9Y219 1238 aa18.33■□□□□ 0.52
DNMT3A-207ENST00000461228 SNCAIPQ9Y6H5 919 aa18.33■□□□□ 0.52
DNMT3A-207ENST00000461228 PPIL2Q13356 520 aa18.32■□□□□ 0.52
DNMT3A-207ENST00000461228 SLC9C1Q4G0N8 1177 aa18.32■□□□□ 0.52
DNMT3A-207ENST00000461228 HABP4Q5JVS0 413 aaKnown RBP18.32■□□□□ 0.52
DNMT3A-207ENST00000461228 DCAF15Q66K64 600 aa18.32■□□□□ 0.52
DNMT3A-207ENST00000461228 VPS37DQ86XT2 251 aa18.32■□□□□ 0.52
DNMT3A-207ENST00000461228 CDAN1Q8IWY9 1227 aa18.32■□□□□ 0.52
DNMT3A-207ENST00000461228 SPINK5Q9NQ38 1064 aaPredicted RBP18.32■□□□□ 0.52
DNMT3A-207ENST00000461228 DOCK1Q14185 1865 aa18.31■□□□□ 0.52
DNMT3A-207ENST00000461228 NBPF7P0C2Y1 421 aaPredicted RBP18.31■□□□□ 0.52
DNMT3A-207ENST00000461228 CAP1Q01518 475 aa18.31■□□□□ 0.52
DNMT3A-207ENST00000461228 SNAPC2Q13487 334 aa18.31■□□□□ 0.52
DNMT3A-207ENST00000461228 PUM3Q15397 648 aaKnown RBP18.31■□□□□ 0.52
DNMT3A-207ENST00000461228 FAM43AQ8N2R8 423 aa18.31■□□□□ 0.52
DNMT3A-207ENST00000461228 ANKRD44Q8N8A2 993 aa18.31■□□□□ 0.52
DNMT3A-207ENST00000461228 OTUD5Q96G74 571 aa18.31■□□□□ 0.52
DNMT3A-207ENST00000461228 TMEM106CQ9BVX2 250 aa18.31■□□□□ 0.52
DNMT3A-207ENST00000461228 BICC1Q9H694 974 aaKnown RBP18.31■□□□□ 0.52
DNMT3A-207ENST00000461228 TRIOBPQ9H2D6 2365 aa18.3■□□□□ 0.52
DNMT3A-207ENST00000461228 SZT2Q5T011 3432 aa18.3■□□□□ 0.52
DNMT3A-207ENST00000461228 TCP10L2B9ZVM9 353 aa18.3■□□□□ 0.52
DNMT3A-207ENST00000461228 FGFR2P21802 821 aa18.3■□□□□ 0.52
DNMT3A-207ENST00000461228 LACTBP83111 547 aaPredicted RBP18.3■□□□□ 0.52
DNMT3A-207ENST00000461228 PUS3Q9BZE2 481 aaKnown RBP18.3■□□□□ 0.52
DNMT3A-207ENST00000461228 FBXO3Q9UK99 471 aa18.3■□□□□ 0.52
DNMT3A-207ENST00000461228 ADGRA2Q96PE1 1338 aa18.29■□□□□ 0.52
DNMT3A-207ENST00000461228 PLIN1O60240 522 aa18.29■□□□□ 0.52
DNMT3A-207ENST00000461228 PPATQ06203 517 aa18.29■□□□□ 0.52
DNMT3A-207ENST00000461228 METTL24Q5JXM2 366 aa18.29■□□□□ 0.52
DNMT3A-207ENST00000461228 SLC4A10Q6U841 1118 aa18.29■□□□□ 0.52
DNMT3A-207ENST00000461228 WRNIP1Q96S55 665 aa18.29■□□□□ 0.52
DNMT3A-207ENST00000461228 PTCH2Q9Y6C5 1203 aa18.29■□□□□ 0.52
DNMT3A-207ENST00000461228 RFX7Q2KHR2 1363 aa18.29■□□□□ 0.52
DNMT3A-207ENST00000461228 KIF22Q14807 665 aa18.28■□□□□ 0.52
DNMT3A-207ENST00000461228 NOL9Q5SY16 702 aaKnown RBP18.28■□□□□ 0.52
DNMT3A-207ENST00000461228 APOBEC3HQ6NTF7 200 aaKnown RBP18.28■□□□□ 0.52
DNMT3A-207ENST00000461228 CNKSR2Q8WXI2 1034 aa18.28■□□□□ 0.52
DNMT3A-207ENST00000461228 KCNH4Q9UQ05 1017 aa18.28■□□□□ 0.52
DNMT3A-207ENST00000461228 PHIPQ8WWQ0 1821 aa18.28■□□□□ 0.52
DNMT3A-207ENST00000461228 MYH2Q9UKX2 1941 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms