RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 IQSEC3Q9UPP2 1182 aaPredicted RBP18.49■□□□□ 0.55
SMPD4-216ENST00000461187 KIAA0100Q14667 2235 aaKnown RBP18.49■□□□□ 0.55
SMPD4-216ENST00000461187 CENPFP49454 3210 aa18.48■□□□□ 0.55
SMPD4-216ENST00000461187 FKTNO75072 461 aa18.48■□□□□ 0.55
SMPD4-216ENST00000461187 PDE8BO95263 885 aa18.48■□□□□ 0.55
SMPD4-216ENST00000461187 CRKP46108 304 aa18.48■□□□□ 0.55
SMPD4-216ENST00000461187 TNFAIP1Q13829 316 aa18.48■□□□□ 0.55
SMPD4-216ENST00000461187 VPS37DQ86XT2 251 aa18.48■□□□□ 0.55
SMPD4-216ENST00000461187 KLHDC4Q8TBB5 520 aa18.48■□□□□ 0.55
SMPD4-216ENST00000461187 HTTP42858 3142 aa18.48■□□□□ 0.55
SMPD4-216ENST00000461187 MYH2Q9UKX2 1941 aa18.47■□□□□ 0.55
SMPD4-216ENST00000461187 IGF2BP3O00425 579 aaKnown RBP eCLIP18.47■□□□□ 0.55
SMPD4-216ENST00000461187 GJA5P36382 358 aa18.47■□□□□ 0.55
SMPD4-216ENST00000461187 ANKRD13AQ8IZ07 590 aa18.47■□□□□ 0.55
SMPD4-216ENST00000461187 TEPSINQ96N21 525 aa18.47■□□□□ 0.55
SMPD4-216ENST00000461187 CHAF1AQ13111 956 aaPredicted RBP18.46■□□□□ 0.55
SMPD4-216ENST00000461187 CAVIN4Q5BKX8 364 aa18.46■□□□□ 0.55
SMPD4-216ENST00000461187 FBXO46Q6PJ61 603 aaPredicted RBP18.46■□□□□ 0.55
SMPD4-216ENST00000461187 CDAN1Q8IWY9 1227 aa18.46■□□□□ 0.55
SMPD4-216ENST00000461187 RBBP6Q7Z6E9 1792 aaKnown RBP18.45■□□□□ 0.54
SMPD4-216ENST00000461187 TCP10L2B9ZVM9 353 aa18.45■□□□□ 0.54
SMPD4-216ENST00000461187 BCAMP50895 628 aa18.45■□□□□ 0.54
SMPD4-216ENST00000461187 HDLBPQ00341 1268 aaKnown RBP18.45■□□□□ 0.54
SMPD4-216ENST00000461187 ALDH1L2Q3SY69 923 aa18.45■□□□□ 0.54
SMPD4-216ENST00000461187 TBC1D22AQ8WUA7 517 aa18.45■□□□□ 0.54
SMPD4-216ENST00000461187 CDCA7LQ96GN5 454 aa18.45■□□□□ 0.54
SMPD4-216ENST00000461187 FRAT2O75474 233 aaPredicted RBP18.44■□□□□ 0.54
SMPD4-216ENST00000461187 FGFR2P21802 821 aa18.44■□□□□ 0.54
SMPD4-216ENST00000461187 RFX5P48382 616 aaPredicted RBP18.44■□□□□ 0.54
SMPD4-216ENST00000461187 TMEM39BQ9GZU3 492 aa18.44■□□□□ 0.54
SMPD4-216ENST00000461187 KIF16BQ96L93 1317 aa18.44■□□□□ 0.54
SMPD4-216ENST00000461187 TESPA1A2RU30 521 aaPredicted RBP18.43■□□□□ 0.54
SMPD4-216ENST00000461187 PUM3Q15397 648 aaKnown RBP18.43■□□□□ 0.54
SMPD4-216ENST00000461187 TRMT2AQ8IZ69 625 aaKnown RBP18.43■□□□□ 0.54
SMPD4-216ENST00000461187 ELP3Q9H9T3 547 aa18.43■□□□□ 0.54
SMPD4-216ENST00000461187 EYA2O00167 538 aa18.42■□□□□ 0.54
SMPD4-216ENST00000461187 TNNI2P48788 182 aa18.42■□□□□ 0.54
SMPD4-216ENST00000461187 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.42■□□□□ 0.54
SMPD4-216ENST00000461187 TEKT1Q969V4 418 aa18.42■□□□□ 0.54
SMPD4-216ENST00000461187 OPTNQ96CV9 577 aa18.42■□□□□ 0.54
SMPD4-216ENST00000461187 PTPN18Q99952 460 aa18.42■□□□□ 0.54
SMPD4-216ENST00000461187 MRIQ9BWK5 157 aa18.42■□□□□ 0.54
SMPD4-216ENST00000461187 SMC4Q9NTJ3 1288 aa18.42■□□□□ 0.54
SMPD4-216ENST00000461187 IFIT1P09914 478 aaKnown RBP18.41■□□□□ 0.54
SMPD4-216ENST00000461187 CRHR2Q13324 411 aa18.41■□□□□ 0.54
SMPD4-216ENST00000461187 OTUD7BQ6GQQ9 843 aa18.41■□□□□ 0.54
SMPD4-216ENST00000461187 MS4A4AQ96JQ5 239 aa18.41■□□□□ 0.54
SMPD4-216ENST00000461187 ZDHHC15Q96MV8 337 aa18.41■□□□□ 0.54
SMPD4-216ENST00000461187 CACNB3P54284 484 aa18.4■□□□□ 0.54
SMPD4-216ENST00000461187 ATG9AQ7Z3C6 839 aa18.4■□□□□ 0.54
SMPD4-216ENST00000461187 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.4■□□□□ 0.54
SMPD4-216ENST00000461187 CNKSR2Q8WXI2 1034 aa18.4■□□□□ 0.54
SMPD4-216ENST00000461187 SUGT1Q9Y2Z0 365 aa18.4■□□□□ 0.54
SMPD4-216ENST00000461187 MAST3O60307 1309 aa18.4■□□□□ 0.54
SMPD4-216ENST00000461187 ZSWIM8A7E2V4 1837 aa18.39■□□□□ 0.54
SMPD4-216ENST00000461187 DOCK2Q92608 1830 aa18.39■□□□□ 0.54
SMPD4-216ENST00000461187 SLC34A2O95436 690 aa18.39■□□□□ 0.53
SMPD4-216ENST00000461187 SLC5A1P13866 664 aa18.39■□□□□ 0.53
SMPD4-216ENST00000461187 MAP3K9P80192 1104 aa18.39■□□□□ 0.53
SMPD4-216ENST00000461187 VGLL4Q14135 290 aa18.39■□□□□ 0.53
SMPD4-216ENST00000461187 APOBEC3HQ6NTF7 200 aaKnown RBP18.39■□□□□ 0.53
SMPD4-216ENST00000461187 OTOP1Q7RTM1 612 aa18.39■□□□□ 0.53
SMPD4-216ENST00000461187 LPIN2Q92539 896 aa18.39■□□□□ 0.53
SMPD4-216ENST00000461187 TRIM17Q9Y577 477 aa18.39■□□□□ 0.53
SMPD4-216ENST00000461187 MKI67P46013 3256 aaKnown RBP18.39■□□□□ 0.53
SMPD4-216ENST00000461187 FKBP1CQ5VVH2 108 aa18.38■□□□□ 0.53
SMPD4-216ENST00000461187 HHIPL2Q6UWX4 724 aa18.38■□□□□ 0.53
SMPD4-216ENST00000461187 FAM83AQ86UY5 434 aa18.38■□□□□ 0.53
SMPD4-216ENST00000461187 BRCA2P51587 3418 aa18.37■□□□□ 0.53
SMPD4-216ENST00000461187 UBTFL1P0CB47 393 aaPredicted RBP18.37■□□□□ 0.53
SMPD4-216ENST00000461187 CD99L2Q8TCZ2 262 aa18.37■□□□□ 0.53
SMPD4-216ENST00000461187 BRI3BPQ8WY22 251 aa18.37■□□□□ 0.53
SMPD4-216ENST00000461187 ERO1AQ96HE7 468 aa18.37■□□□□ 0.53
SMPD4-216ENST00000461187 TMOD2Q9NZR1 351 aa18.37■□□□□ 0.53
SMPD4-216ENST00000461187 NOB1Q9ULX3 412 aaKnown RBP18.37■□□□□ 0.53
SMPD4-216ENST00000461187 CSADQ9Y600 493 aa18.37■□□□□ 0.53
SMPD4-216ENST00000461187 CT47B1P0C2W7 299 aaPredicted RBP18.36■□□□□ 0.53
SMPD4-216ENST00000461187 PTPRFP10586 1907 aa18.36■□□□□ 0.53
SMPD4-216ENST00000461187 CAP1Q01518 475 aa18.36■□□□□ 0.53
SMPD4-216ENST00000461187 WDR66Q8TBY9 1149 aa18.36■□□□□ 0.53
SMPD4-216ENST00000461187 SIL1Q9H173 461 aa18.36■□□□□ 0.53
SMPD4-216ENST00000461187 FBXO3Q9UK99 471 aa18.36■□□□□ 0.53
SMPD4-216ENST00000461187 MGAMO43451 1857 aa18.35■□□□□ 0.53
SMPD4-216ENST00000461187 RPAP1Q9BWH6 1393 aaPredicted RBP18.35■□□□□ 0.53
SMPD4-216ENST00000461187 CCL15-CCL14A0A0B4J2E2 113 aa18.35■□□□□ 0.53
SMPD4-216ENST00000461187 CIAO1O76071 339 aa18.35■□□□□ 0.53
SMPD4-216ENST00000461187 GTF2A2P52657 109 aa18.35■□□□□ 0.53
SMPD4-216ENST00000461187 SP3Q02447 781 aa18.35■□□□□ 0.53
SMPD4-216ENST00000461187 CCL15Q16663 113 aa18.35■□□□□ 0.53
SMPD4-216ENST00000461187 OTUD5Q96G74 571 aa18.35■□□□□ 0.53
SMPD4-216ENST00000461187 SNCAIPQ9Y6H5 919 aa18.35■□□□□ 0.53
SMPD4-216ENST00000461187 SPDYE5A6NIY4 337 aa18.34■□□□□ 0.53
SMPD4-216ENST00000461187 ATP2B3Q16720 1220 aa18.34■□□□□ 0.53
SMPD4-216ENST00000461187 WRNIP1Q96S55 665 aa18.34■□□□□ 0.53
SMPD4-216ENST00000461187 CEP126Q9P2H0 1117 aa18.34■□□□□ 0.53
SMPD4-216ENST00000461187 PTPN22Q9Y2R2 807 aa18.34■□□□□ 0.53
SMPD4-216ENST00000461187 LRRFIP2Q9Y608 721 aaKnown RBP18.34■□□□□ 0.53
SMPD4-216ENST00000461187 TAF1CQ15572 869 aaPredicted RBP18.33■□□□□ 0.52
SMPD4-216ENST00000461187 FAM43AQ8N2R8 423 aa18.33■□□□□ 0.52
SMPD4-216ENST00000461187 ZKSCAN4Q969J2 545 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms