RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 MTMR14Q8NCE2 650 aa19.9■□□□□ 0.78
SHANK1-205ENST00000461154 ZNF512BQ96KM6 892 aaPredicted RBP19.9■□□□□ 0.78
SHANK1-205ENST00000461154 RWDD1Q9H446 243 aaPredicted RBP19.9■□□□□ 0.78
SHANK1-205ENST00000461154 MKRN1Q9UHC7 482 aaKnown RBP19.9■□□□□ 0.78
SHANK1-205ENST00000461154 TTF2Q9UNY4 1162 aaKnown RBP19.9■□□□□ 0.78
SHANK1-205ENST00000461154 MAST3O60307 1309 aa19.9■□□□□ 0.78
SHANK1-205ENST00000461154 ASTN2O75129 1339 aaPredicted RBP19.9■□□□□ 0.78
SHANK1-205ENST00000461154 SALL1Q9NSC2 1324 aa19.9■□□□□ 0.78
SHANK1-205ENST00000461154 JMYQ8N9B5 988 aa19.89■□□□□ 0.77
SHANK1-205ENST00000461154 GCC1Q96CN9 775 aa19.89■□□□□ 0.77
SHANK1-205ENST00000461154 ZBED3Q96IU2 234 aaPredicted RBP19.89■□□□□ 0.77
SHANK1-205ENST00000461154 ZNF408Q9H9D4 720 aa19.89■□□□□ 0.77
SHANK1-205ENST00000461154 TLR7Q9NYK1 1049 aaKnown RBP19.89■□□□□ 0.77
SHANK1-205ENST00000461154 ZBTB47Q9UFB7 747 aaPredicted RBP19.89■□□□□ 0.77
SHANK1-205ENST00000461154 CNTNAP1P78357 1384 aa19.88■□□□□ 0.77
SHANK1-205ENST00000461154 RASSF10A6NK89 507 aa19.88■□□□□ 0.77
SHANK1-205ENST00000461154 ADM5C9JUS6 153 aa19.88■□□□□ 0.77
SHANK1-205ENST00000461154 SPATA5Q8NB90 893 aa19.88■□□□□ 0.77
SHANK1-205ENST00000461154 BCL11AQ9H165 835 aa19.88■□□□□ 0.77
SHANK1-205ENST00000461154 HMG20BQ9P0W2 317 aa19.88■□□□□ 0.77
SHANK1-205ENST00000461154 MYO1BO43795 1136 aa19.87■□□□□ 0.77
SHANK1-205ENST00000461154 MCAMP43121 646 aa19.87■□□□□ 0.77
SHANK1-205ENST00000461154 HDLBPQ00341 1268 aaKnown RBP19.87■□□□□ 0.77
SHANK1-205ENST00000461154 CFAP100Q494V2 611 aa19.87■□□□□ 0.77
SHANK1-205ENST00000461154 SPTY2D1Q68D10 685 aaPredicted RBP19.87■□□□□ 0.77
SHANK1-205ENST00000461154 SERPINA10Q9UK55 444 aa19.87■□□□□ 0.77
SHANK1-205ENST00000461154 TLL2Q9Y6L7 1015 aa19.87■□□□□ 0.77
SHANK1-205ENST00000461154 SMARCA5O60264 1052 aaPredicted RBP19.86■□□□□ 0.77
SHANK1-205ENST00000461154 LDHBP07195 334 aaKnown RBP19.86■□□□□ 0.77
SHANK1-205ENST00000461154 RBM5P52756 815 aaKnown RBP eCLIP19.86■□□□□ 0.77
SHANK1-205ENST00000461154 SPDYE2BA6NHP3 402 aa19.85■□□□□ 0.77
SHANK1-205ENST00000461154 SPDYE6P0CI01 402 aa19.85■□□□□ 0.77
SHANK1-205ENST00000461154 DLK2Q6UY11 383 aa19.85■□□□□ 0.77
SHANK1-205ENST00000461154 APOBEC3FQ8IUX4 373 aaKnown RBP19.85■□□□□ 0.77
SHANK1-205ENST00000461154 C2orf69Q8N8R5 385 aa19.85■□□□□ 0.77
SHANK1-205ENST00000461154 TEKT1Q969V4 418 aa19.85■□□□□ 0.77
SHANK1-205ENST00000461154 CDCA5Q96FF9 252 aa19.85■□□□□ 0.77
SHANK1-205ENST00000461154 ABCF2Q9UG63 623 aa19.85■□□□□ 0.77
SHANK1-205ENST00000461154 TRPM7Q96QT4 1865 aa19.84■□□□□ 0.77
SHANK1-205ENST00000461154 CRKP46108 304 aa19.84■□□□□ 0.77
SHANK1-205ENST00000461154 GRIK5Q16478 980 aa19.84■□□□□ 0.77
SHANK1-205ENST00000461154 PI16Q6UXB8 463 aa19.84■□□□□ 0.77
SHANK1-205ENST00000461154 ERICH6Q7L0X2 663 aa19.84■□□□□ 0.77
SHANK1-205ENST00000461154 SAPCD2Q86UD0 394 aa19.84■□□□□ 0.77
SHANK1-205ENST00000461154 GPATCH3Q96I76 525 aa19.84■□□□□ 0.77
SHANK1-205ENST00000461154 HHIPL1Q96JK4 782 aa19.84■□□□□ 0.77
SHANK1-205ENST00000461154 PRMT6Q96LA8 375 aaPredicted RBP19.84■□□□□ 0.77
SHANK1-205ENST00000461154 MRIQ9BWK5 157 aa19.84■□□□□ 0.77
SHANK1-205ENST00000461154 GBA2Q9HCG7 927 aaPredicted RBP19.84■□□□□ 0.77
SHANK1-205ENST00000461154 POLR2AP24928 1970 aaKnown RBP19.83■□□□□ 0.77
SHANK1-205ENST00000461154 AKAP11Q9UKA4 1901 aa19.83■□□□□ 0.77
SHANK1-205ENST00000461154 PRDX5P30044 214 aa19.83■□□□□ 0.77
SHANK1-205ENST00000461154 ECE1P42892 770 aa19.83■□□□□ 0.77
SHANK1-205ENST00000461154 VEGFBP49765 207 aa19.83■□□□□ 0.77
SHANK1-205ENST00000461154 DZIP1Q86YF9 867 aaKnown RBP19.83■□□□□ 0.77
SHANK1-205ENST00000461154 SLF2Q8IX21 1173 aa19.83■□□□□ 0.77
SHANK1-205ENST00000461154 ECM29Q5VYK3 1845 aa19.83■□□□□ 0.76
SHANK1-205ENST00000461154 IGSF3O75054 1194 aa19.82■□□□□ 0.76
SHANK1-205ENST00000461154 HHIPL2Q6UWX4 724 aa19.82■□□□□ 0.76
SHANK1-205ENST00000461154 PAXIP1Q6ZW49 1069 aaPredicted RBP19.82■□□□□ 0.76
SHANK1-205ENST00000461154 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.82■□□□□ 0.76
SHANK1-205ENST00000461154 SNRKQ9NRH2 765 aa19.82■□□□□ 0.76
SHANK1-205ENST00000461154 PCDHAC2Q9Y5I4 1007 aa19.82■□□□□ 0.76
SHANK1-205ENST00000461154 NEFLP07196 543 aa19.81■□□□□ 0.76
SHANK1-205ENST00000461154 NF2P35240 595 aa19.81■□□□□ 0.76
SHANK1-205ENST00000461154 ANKRD45Q5TZF3 282 aa19.81■□□□□ 0.76
SHANK1-205ENST00000461154 SMC5Q8IY18 1101 aa19.81■□□□□ 0.76
SHANK1-205ENST00000461154 LRP2BPQ9P2M1 347 aa19.81■□□□□ 0.76
SHANK1-205ENST00000461154 SCAF8Q9UPN6 1271 aaKnown RBP19.81■□□□□ 0.76
SHANK1-205ENST00000461154 WDR33Q9C0J8 1336 aaKnown RBP19.8■□□□□ 0.76
SHANK1-205ENST00000461154 IGHDP01880 384 aa19.8■□□□□ 0.76
SHANK1-205ENST00000461154 ATP5JP18859 108 aa19.8■□□□□ 0.76
SHANK1-205ENST00000461154 ZAP70P43403 619 aa19.8■□□□□ 0.76
SHANK1-205ENST00000461154 HUNKP57058 714 aa19.8■□□□□ 0.76
SHANK1-205ENST00000461154 FKBP1BP68106 108 aa19.8■□□□□ 0.76
SHANK1-205ENST00000461154 IFFO2Q5TF58 517 aa19.8■□□□□ 0.76
SHANK1-205ENST00000461154 ZDHHC15Q96MV8 337 aa19.8■□□□□ 0.76
SHANK1-205ENST00000461154 ECHDC1Q9NTX5 307 aa19.8■□□□□ 0.76
SHANK1-205ENST00000461154 RAI14Q9P0K7 980 aa19.8■□□□□ 0.76
SHANK1-205ENST00000461154 PPP2R3BQ9Y5P8 575 aa19.8■□□□□ 0.76
SHANK1-205ENST00000461154 CLRN2A0PK11 232 aa19.79■□□□□ 0.76
SHANK1-205ENST00000461154 CYP2E1P05181 493 aaPredicted RBP19.79■□□□□ 0.76
SHANK1-205ENST00000461154 GSTO1P78417 241 aa19.79■□□□□ 0.76
SHANK1-205ENST00000461154 TTF1Q15361 905 aaPredicted RBP19.79■□□□□ 0.76
SHANK1-205ENST00000461154 TBC1D9Q6ZT07 1266 aa19.79■□□□□ 0.76
SHANK1-205ENST00000461154 CAPNS2Q96L46 248 aa19.79■□□□□ 0.76
SHANK1-205ENST00000461154 DEFB129Q9H1M3 183 aa19.79■□□□□ 0.76
SHANK1-205ENST00000461154 VEZTQ9HBM0 779 aa19.79■□□□□ 0.76
SHANK1-205ENST00000461154 MECOMQ03112 1051 aa19.78■□□□□ 0.76
SHANK1-205ENST00000461154 TNFAIP1Q13829 316 aa19.78■□□□□ 0.76
SHANK1-205ENST00000461154 DIXDC1Q155Q3 683 aa19.78■□□□□ 0.76
SHANK1-205ENST00000461154 SPDYE2Q495Y8 402 aa19.78■□□□□ 0.76
SHANK1-205ENST00000461154 PRAMEF18Q5VWM3 479 aa19.78■□□□□ 0.76
SHANK1-205ENST00000461154 CYP4F22Q6NT55 531 aa19.78■□□□□ 0.76
SHANK1-205ENST00000461154 TDRD3Q9H7E2 651 aaKnown RBP19.78■□□□□ 0.76
SHANK1-205ENST00000461154 TMOD2Q9NZR1 351 aa19.78■□□□□ 0.76
SHANK1-205ENST00000461154 ZNF70Q9UC06 446 aaPredicted RBP19.78■□□□□ 0.76
SHANK1-205ENST00000461154 MAST2Q6P0Q8 1798 aa19.78■□□□□ 0.76
SHANK1-205ENST00000461154 MYH2Q9UKX2 1941 aa19.77■□□□□ 0.76
SHANK1-205ENST00000461154 LDHCP07864 332 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms