RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 ZNF594Q96JF6 807 aaPredicted RBP18.42■□□□□ 0.54
NCK1-202ENST00000460960 API5Q9BZZ5 524 aaKnown RBP18.42■□□□□ 0.54
NCK1-202ENST00000460960 CNNM1Q9NRU3 951 aa18.42■□□□□ 0.54
NCK1-202ENST00000460960 OTOFQ9HC10 1997 aa18.42■□□□□ 0.54
NCK1-202ENST00000460960 IRS2Q9Y4H2 1338 aa18.42■□□□□ 0.54
NCK1-202ENST00000460960 LAMB1P07942 1786 aa18.42■□□□□ 0.54
NCK1-202ENST00000460960 UNCXA6NJT0 531 aa18.41■□□□□ 0.54
NCK1-202ENST00000460960 ALDH1L1O75891 902 aa18.41■□□□□ 0.54
NCK1-202ENST00000460960 TNFAIP1Q13829 316 aa18.41■□□□□ 0.54
NCK1-202ENST00000460960 ZKSCAN2Q63HK3 967 aa18.41■□□□□ 0.54
NCK1-202ENST00000460960 C15orf52Q6ZUT6 534 aaKnown RBP18.41■□□□□ 0.54
NCK1-202ENST00000460960 PTPN18Q99952 460 aa18.41■□□□□ 0.54
NCK1-202ENST00000460960 TMEM106CQ9BVX2 250 aa18.41■□□□□ 0.54
NCK1-202ENST00000460960 RBBP6Q7Z6E9 1792 aaKnown RBP18.4■□□□□ 0.54
NCK1-202ENST00000460960 GRM8O00222 908 aa18.4■□□□□ 0.54
NCK1-202ENST00000460960 MYCP01106 439 aaPredicted RBP18.4■□□□□ 0.54
NCK1-202ENST00000460960 NBPF7P0C2Y1 421 aaPredicted RBP18.4■□□□□ 0.54
NCK1-202ENST00000460960 FKBP1AP62942 108 aaKnown RBP18.4■□□□□ 0.54
NCK1-202ENST00000460960 FOXO4P98177 505 aa18.4■□□□□ 0.54
NCK1-202ENST00000460960 CCDC57Q2TAC2 916 aa18.4■□□□□ 0.54
NCK1-202ENST00000460960 EPHA10Q5JZY3 1008 aa18.4■□□□□ 0.54
NCK1-202ENST00000460960 MFSD14BQ5SR56 506 aa18.4■□□□□ 0.54
NCK1-202ENST00000460960 LMBR1LQ6UX01 489 aa18.4■□□□□ 0.54
NCK1-202ENST00000460960 LDHAL6AQ6ZMR3 332 aa18.4■□□□□ 0.54
NCK1-202ENST00000460960 TDRD3Q9H7E2 651 aaKnown RBP18.4■□□□□ 0.54
NCK1-202ENST00000460960 ZNF70Q9UC06 446 aaPredicted RBP18.4■□□□□ 0.54
NCK1-202ENST00000460960 TTF2Q9UNY4 1162 aaKnown RBP18.4■□□□□ 0.54
NCK1-202ENST00000460960 TCP10L2B9ZVM9 353 aa18.39■□□□□ 0.53
NCK1-202ENST00000460960 TAF1CQ15572 869 aaPredicted RBP18.39■□□□□ 0.53
NCK1-202ENST00000460960 TMEM57Q8N5G2 664 aa18.39■□□□□ 0.53
NCK1-202ENST00000460960 CNKSR2Q8WXI2 1034 aa18.39■□□□□ 0.53
NCK1-202ENST00000460960 ARMC5Q96C12 935 aa18.39■□□□□ 0.53
NCK1-202ENST00000460960 KAZALD1Q96I82 304 aa18.39■□□□□ 0.53
NCK1-202ENST00000460960 USP44Q9H0E7 712 aa18.39■□□□□ 0.53
NCK1-202ENST00000460960 HTTP42858 3142 aa18.39■□□□□ 0.53
NCK1-202ENST00000460960 CCL15-CCL14A0A0B4J2E2 113 aa18.38■□□□□ 0.53
NCK1-202ENST00000460960 IPO8O15397 1037 aaKnown RBP18.38■□□□□ 0.53
NCK1-202ENST00000460960 CAP1Q01518 475 aa18.38■□□□□ 0.53
NCK1-202ENST00000460960 CCL15Q16663 113 aa18.38■□□□□ 0.53
NCK1-202ENST00000460960 SLC4A8Q2Y0W8 1093 aa18.38■□□□□ 0.53
NCK1-202ENST00000460960 SPDYE2Q495Y8 402 aa18.38■□□□□ 0.53
NCK1-202ENST00000460960 SLC9C1Q4G0N8 1177 aa18.38■□□□□ 0.53
NCK1-202ENST00000460960 PANK1Q8TE04 598 aa18.38■□□□□ 0.53
NCK1-202ENST00000460960 SUCLG2Q96I99 432 aa18.38■□□□□ 0.53
NCK1-202ENST00000460960 GYG1P46976 350 aa18.37■□□□□ 0.53
NCK1-202ENST00000460960 ARHGEF6Q15052 776 aa18.37■□□□□ 0.53
NCK1-202ENST00000460960 C20orf194Q5TEA3 1177 aa18.37■□□□□ 0.53
NCK1-202ENST00000460960 CDAN1Q8IWY9 1227 aa18.37■□□□□ 0.53
NCK1-202ENST00000460960 ZFYVE28Q9HCC9 887 aa18.37■□□□□ 0.53
NCK1-202ENST00000460960 C9orf78Q9NZ63 289 aaPredicted RBP18.37■□□□□ 0.53
NCK1-202ENST00000460960 CSADQ9Y600 493 aa18.37■□□□□ 0.53
NCK1-202ENST00000460960 UTYO14607 1347 aa18.37■□□□□ 0.53
NCK1-202ENST00000460960 TESPA1A2RU30 521 aaPredicted RBP18.36■□□□□ 0.53
NCK1-202ENST00000460960 MKI67P46013 3256 aaKnown RBP18.36■□□□□ 0.53
NCK1-202ENST00000460960 TNNI2P48788 182 aa18.36■□□□□ 0.53
NCK1-202ENST00000460960 NBPF11Q86T75 865 aa18.36■□□□□ 0.53
NCK1-202ENST00000460960 DZIP1LQ8IYY4 767 aaKnown RBP18.36■□□□□ 0.53
NCK1-202ENST00000460960 BRI3BPQ8WY22 251 aa18.36■□□□□ 0.53
NCK1-202ENST00000460960 OTUD5Q96G74 571 aa18.36■□□□□ 0.53
NCK1-202ENST00000460960 MEIS3Q99687 375 aa18.36■□□□□ 0.53
NCK1-202ENST00000460960 TMEM39BQ9GZU3 492 aa18.36■□□□□ 0.53
NCK1-202ENST00000460960 SERPINA10Q9UK55 444 aa18.36■□□□□ 0.53
NCK1-202ENST00000460960 PTCH2Q9Y6C5 1203 aa18.36■□□□□ 0.53
NCK1-202ENST00000460960 CENPFP49454 3210 aa18.35■□□□□ 0.53
NCK1-202ENST00000460960 FAM205AQ6ZU69 1335 aa18.35■□□□□ 0.53
NCK1-202ENST00000460960 ECM2O94769 699 aaPredicted RBP18.35■□□□□ 0.53
NCK1-202ENST00000460960 HIBADHP31937 336 aaKnown RBP18.35■□□□□ 0.53
NCK1-202ENST00000460960 GTF2A2P52657 109 aa18.35■□□□□ 0.53
NCK1-202ENST00000460960 VGLL4Q14135 290 aa18.35■□□□□ 0.53
NCK1-202ENST00000460960 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.35■□□□□ 0.53
NCK1-202ENST00000460960 ZNF333Q96JL9 665 aa18.35■□□□□ 0.53
NCK1-202ENST00000460960 MS4A4AQ96JQ5 239 aa18.35■□□□□ 0.53
NCK1-202ENST00000460960 WDHD1O75717 1129 aaPredicted RBP18.34■□□□□ 0.53
NCK1-202ENST00000460960 CRKP46108 304 aa18.34■□□□□ 0.53
NCK1-202ENST00000460960 MAP3K9P80192 1104 aa18.34■□□□□ 0.53
NCK1-202ENST00000460960 CHAF1AQ13111 956 aaPredicted RBP18.34■□□□□ 0.53
NCK1-202ENST00000460960 VPS37DQ86XT2 251 aa18.34■□□□□ 0.53
NCK1-202ENST00000460960 IQSEC3Q9UPP2 1182 aaPredicted RBP18.34■□□□□ 0.53
NCK1-202ENST00000460960 ARAP2Q8WZ64 1704 aa18.33■□□□□ 0.52
NCK1-202ENST00000460960 FRAT2O75474 233 aaPredicted RBP18.33■□□□□ 0.52
NCK1-202ENST00000460960 FAM43AQ8N2R8 423 aa18.33■□□□□ 0.52
NCK1-202ENST00000460960 TDRD7Q8NHU6 1098 aaKnown RBP18.33■□□□□ 0.52
NCK1-202ENST00000460960 TEPSINQ96N21 525 aa18.33■□□□□ 0.52
NCK1-202ENST00000460960 CACNB3P54284 484 aa18.32■□□□□ 0.52
NCK1-202ENST00000460960 UBE4AQ14139 1066 aa18.32■□□□□ 0.52
NCK1-202ENST00000460960 KIF22Q14807 665 aa18.32■□□□□ 0.52
NCK1-202ENST00000460960 FTSJ3Q8IY81 847 aaKnown RBP18.32■□□□□ 0.52
NCK1-202ENST00000460960 ANKRD44Q8N8A2 993 aa18.32■□□□□ 0.52
NCK1-202ENST00000460960 BICC1Q9H694 974 aaKnown RBP18.32■□□□□ 0.52
NCK1-202ENST00000460960 ZSWIM8A7E2V4 1837 aa18.31■□□□□ 0.52
NCK1-202ENST00000460960 FXR1P51114 621 aaKnown RBP eCLIP18.31■□□□□ 0.52
NCK1-202ENST00000460960 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.31■□□□□ 0.52
NCK1-202ENST00000460960 SH3TC2Q8TF17 1288 aa18.31■□□□□ 0.52
NCK1-202ENST00000460960 FAM84BQ96KN1 310 aaPredicted RBP18.31■□□□□ 0.52
NCK1-202ENST00000460960 PUS3Q9BZE2 481 aaKnown RBP18.31■□□□□ 0.52
NCK1-202ENST00000460960 GRIK5Q16478 980 aa18.3■□□□□ 0.52
NCK1-202ENST00000460960 ITPRIPQ8IWB1 547 aa18.3■□□□□ 0.52
NCK1-202ENST00000460960 WRNIP1Q96S55 665 aa18.3■□□□□ 0.52
NCK1-202ENST00000460960 ARHGAP39Q9C0H5 1083 aa18.3■□□□□ 0.52
NCK1-202ENST00000460960 TMOD2Q9NZR1 351 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms