RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 SPATA5Q8NB90 893 aa25.31■■□□□ 1.64
RPUSD3-210ENST00000460909 DCPSQ96C86 337 aaKnown RBP25.31■■□□□ 1.64
RPUSD3-210ENST00000460909 PRMT6Q96LA8 375 aaPredicted RBP25.31■■□□□ 1.64
RPUSD3-210ENST00000460909 MRIQ9BWK5 157 aa25.31■■□□□ 1.64
RPUSD3-210ENST00000460909 AOX1Q06278 1338 aa25.31■■□□□ 1.64
RPUSD3-210ENST00000460909 PITPNM2Q9BZ72 1349 aa25.31■■□□□ 1.64
RPUSD3-210ENST00000460909 PRDX5P30044 214 aa25.3■■□□□ 1.64
RPUSD3-210ENST00000460909 USP48Q86UV5 1035 aa25.3■■□□□ 1.64
RPUSD3-210ENST00000460909 CRKP46108 304 aa25.29■■□□□ 1.64
RPUSD3-210ENST00000460909 TTC39AQ5SRH9 613 aa25.29■■□□□ 1.64
RPUSD3-210ENST00000460909 DLK2Q6UY11 383 aa25.29■■□□□ 1.64
RPUSD3-210ENST00000460909 KRT26Q7Z3Y9 468 aa25.29■■□□□ 1.64
RPUSD3-210ENST00000460909 LRRCC1Q9C099 1032 aa25.29■■□□□ 1.64
RPUSD3-210ENST00000460909 TRPM7Q96QT4 1865 aa25.29■■□□□ 1.64
RPUSD3-210ENST00000460909 MAST3O60307 1309 aa25.28■■□□□ 1.64
RPUSD3-210ENST00000460909 ADM5C9JUS6 153 aa25.27■■□□□ 1.64
RPUSD3-210ENST00000460909 LDHBP07195 334 aaKnown RBP25.27■■□□□ 1.64
RPUSD3-210ENST00000460909 RBM5P52756 815 aaKnown RBP eCLIP25.27■■□□□ 1.64
RPUSD3-210ENST00000460909 HDAC1Q13547 482 aaPredicted RBP25.27■■□□□ 1.64
RPUSD3-210ENST00000460909 ZGPATQ8N5A5 531 aaKnown RBP25.27■■□□□ 1.64
RPUSD3-210ENST00000460909 SMARCA5O60264 1052 aaPredicted RBP25.26■■□□□ 1.63
RPUSD3-210ENST00000460909 IRX6P78412 446 aaPredicted RBP25.26■■□□□ 1.63
RPUSD3-210ENST00000460909 CST9Q5W186 159 aa25.26■■□□□ 1.63
RPUSD3-210ENST00000460909 HHIPL2Q6UWX4 724 aa25.26■■□□□ 1.63
RPUSD3-210ENST00000460909 SULF1Q8IWU6 871 aa25.26■■□□□ 1.63
RPUSD3-210ENST00000460909 TEKT1Q969V4 418 aa25.26■■□□□ 1.63
RPUSD3-210ENST00000460909 SNRKQ9NRH2 765 aa25.26■■□□□ 1.63
RPUSD3-210ENST00000460909 SCAF8Q9UPN6 1271 aaKnown RBP25.26■■□□□ 1.63
RPUSD3-210ENST00000460909 HTRA3P83110 453 aa25.25■■□□□ 1.63
RPUSD3-210ENST00000460909 TBC1D9Q6ZT07 1266 aa25.25■■□□□ 1.63
RPUSD3-210ENST00000460909 ZDHHC15Q96MV8 337 aa25.25■■□□□ 1.63
RPUSD3-210ENST00000460909 ABCF2Q9UG63 623 aa25.25■■□□□ 1.63
RPUSD3-210ENST00000460909 IFIT2P09913 472 aaKnown RBP25.24■■□□□ 1.63
RPUSD3-210ENST00000460909 DIXDC1Q155Q3 683 aa25.24■■□□□ 1.63
RPUSD3-210ENST00000460909 APOBEC3HQ6NTF7 200 aaKnown RBP25.24■■□□□ 1.63
RPUSD3-210ENST00000460909 CYP2E1P05181 493 aaPredicted RBP25.23■■□□□ 1.63
RPUSD3-210ENST00000460909 SPDYE2Q495Y8 402 aa25.23■■□□□ 1.63
RPUSD3-210ENST00000460909 SPTY2D1Q68D10 685 aaPredicted RBP25.23■■□□□ 1.63
RPUSD3-210ENST00000460909 ZNF384Q8TF68 577 aa25.23■■□□□ 1.63
RPUSD3-210ENST00000460909 CREBZFQ9NS37 354 aa25.23■■□□□ 1.63
RPUSD3-210ENST00000460909 MYH2Q9UKX2 1941 aa25.23■■□□□ 1.63
RPUSD3-210ENST00000460909 MYO5AQ9Y4I1 1855 aaKnown RBP25.22■■□□□ 1.63
RPUSD3-210ENST00000460909 CLRN2A0PK11 232 aa25.22■■□□□ 1.63
RPUSD3-210ENST00000460909 TMEM88BA6NKF7 163 aa25.22■■□□□ 1.63
RPUSD3-210ENST00000460909 MYO1BO43795 1136 aa25.22■■□□□ 1.63
RPUSD3-210ENST00000460909 ZAP70P43403 619 aa25.22■■□□□ 1.63
RPUSD3-210ENST00000460909 APOBEC3FQ8IUX4 373 aaKnown RBP25.22■■□□□ 1.63
RPUSD3-210ENST00000460909 TDRD3Q9H7E2 651 aaKnown RBP25.22■■□□□ 1.63
RPUSD3-210ENST00000460909 DAGLAQ9Y4D2 1042 aa25.22■■□□□ 1.63
RPUSD3-210ENST00000460909 ERICH6Q7L0X2 663 aa25.21■■□□□ 1.63
RPUSD3-210ENST00000460909 BCL11AQ9H165 835 aa25.21■■□□□ 1.63
RPUSD3-210ENST00000460909 ZNF70Q9UC06 446 aaPredicted RBP25.21■■□□□ 1.63
RPUSD3-210ENST00000460909 CELF2O95319 508 aaKnown RBP25.2■■□□□ 1.62
RPUSD3-210ENST00000460909 MECOMQ03112 1051 aa25.2■■□□□ 1.62
RPUSD3-210ENST00000460909 CDCA5Q96FF9 252 aa25.2■■□□□ 1.62
RPUSD3-210ENST00000460909 GAKO14976 1311 aa25.19■■□□□ 1.62
RPUSD3-210ENST00000460909 IGHDP01880 384 aa25.19■■□□□ 1.62
RPUSD3-210ENST00000460909 DNAJC5GQ8N7S2 189 aa25.19■■□□□ 1.62
RPUSD3-210ENST00000460909 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.19■■□□□ 1.62
RPUSD3-210ENST00000460909 NSUN4Q96CB9 384 aaKnown RBP25.19■■□□□ 1.62
RPUSD3-210ENST00000460909 GCC1Q96CN9 775 aa25.19■■□□□ 1.62
RPUSD3-210ENST00000460909 FAM163AQ96GL9 167 aaPredicted RBP25.19■■□□□ 1.62
RPUSD3-210ENST00000460909 NDUFB9Q9Y6M9 179 aa25.19■■□□□ 1.62
RPUSD3-210ENST00000460909 DZIP1Q86YF9 867 aaKnown RBP25.18■■□□□ 1.62
RPUSD3-210ENST00000460909 DEFB129Q9H1M3 183 aa25.18■■□□□ 1.62
RPUSD3-210ENST00000460909 PIH1D3Q9NQM4 214 aaKnown RBP25.18■■□□□ 1.62
RPUSD3-210ENST00000460909 ATP5JP18859 108 aa25.17■■□□□ 1.62
RPUSD3-210ENST00000460909 PRAMEF18Q5VWM3 479 aa25.17■■□□□ 1.62
RPUSD3-210ENST00000460909 RWDD1Q9H446 243 aaPredicted RBP25.17■■□□□ 1.62
RPUSD3-210ENST00000460909 ANTXR1Q9H6X2 564 aa25.17■■□□□ 1.62
RPUSD3-210ENST00000460909 ZNF408Q9H9D4 720 aa25.17■■□□□ 1.62
RPUSD3-210ENST00000460909 VEZTQ9HBM0 779 aa25.17■■□□□ 1.62
RPUSD3-210ENST00000460909 LRP2BPQ9P2M1 347 aa25.17■■□□□ 1.62
RPUSD3-210ENST00000460909 DOCK2Q92608 1830 aa25.16■■□□□ 1.62
RPUSD3-210ENST00000460909 MAST2Q6P0Q8 1798 aa25.16■■□□□ 1.62
RPUSD3-210ENST00000460909 SMC5Q8IY18 1101 aa25.16■■□□□ 1.62
RPUSD3-210ENST00000460909 RAI14Q9P0K7 980 aa25.16■■□□□ 1.62
RPUSD3-210ENST00000460909 CDC42EP5Q6NZY7 148 aa25.15■■□□□ 1.62
RPUSD3-210ENST00000460909 PPP2R3BQ9Y5P8 575 aa25.15■■□□□ 1.62
RPUSD3-210ENST00000460909 MROH7-TTC4A0A0A0MT08 1334 aa25.14■■□□□ 1.62
RPUSD3-210ENST00000460909 IGSF3O75054 1194 aa25.14■■□□□ 1.62
RPUSD3-210ENST00000460909 CACNB3P54284 484 aa25.14■■□□□ 1.62
RPUSD3-210ENST00000460909 RASA3Q14644 834 aa25.14■■□□□ 1.62
RPUSD3-210ENST00000460909 FKBP1CQ5VVH2 108 aa25.14■■□□□ 1.62
RPUSD3-210ENST00000460909 SLF2Q8IX21 1173 aa25.14■■□□□ 1.62
RPUSD3-210ENST00000460909 TLL2Q9Y6L7 1015 aa25.14■■□□□ 1.62
RPUSD3-210ENST00000460909 CNTNAP1P78357 1384 aa25.14■■□□□ 1.61
RPUSD3-210ENST00000460909 GPR75-ASB3A0A0A6YYF3 556 aa25.13■■□□□ 1.61
RPUSD3-210ENST00000460909 TCP10L2B9ZVM9 353 aa25.13■■□□□ 1.61
RPUSD3-210ENST00000460909 TNFAIP1Q13829 316 aa25.13■■□□□ 1.61
RPUSD3-210ENST00000460909 SAPCD2Q86UD0 394 aa25.13■■□□□ 1.61
RPUSD3-210ENST00000460909 RASSF10A6NK89 507 aa25.12■■□□□ 1.61
RPUSD3-210ENST00000460909 GSTO1P78417 241 aa25.12■■□□□ 1.61
RPUSD3-210ENST00000460909 ANKRD45Q5TZF3 282 aa25.12■■□□□ 1.61
RPUSD3-210ENST00000460909 OTUD7AQ8TE49 926 aaPredicted RBP25.12■■□□□ 1.61
RPUSD3-210ENST00000460909 BOLA2Q9H3K6 86 aa25.12■■□□□ 1.61
RPUSD3-210ENST00000460909 GBA2Q9HCG7 927 aaPredicted RBP25.12■■□□□ 1.61
RPUSD3-210ENST00000460909 ECHDC1Q9NTX5 307 aa25.12■■□□□ 1.61
RPUSD3-210ENST00000460909 SALL3Q9BXA9 1300 aa25.12■■□□□ 1.61
RPUSD3-210ENST00000460909 LDHCP07864 332 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms