RNA–Protein interactions for RNA: ENST00000460886.1

COL6A2-207, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 306 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-207ENST00000460886 C20orf194Q5TEA3 1177 aa11.79□□□□□ -0.52
COL6A2-207ENST00000460886 CNNM1Q9NRU3 951 aa11.79□□□□□ -0.52
COL6A2-207ENST00000460886 SERPINA10Q9UK55 444 aa11.79□□□□□ -0.52
COL6A2-207ENST00000460886 COG6Q9Y2V7 657 aa11.79□□□□□ -0.52
COL6A2-207ENST00000460886 RIPOR2Q9Y4F9 1068 aa11.79□□□□□ -0.52
COL6A2-207ENST00000460886 AOX1Q06278 1338 aa11.79□□□□□ -0.52
COL6A2-207ENST00000460886 ZBTB7BO15156 539 aaPredicted RBP11.78□□□□□ -0.52
COL6A2-207ENST00000460886 PPP1R12BO60237 982 aaPredicted RBP11.78□□□□□ -0.52
COL6A2-207ENST00000460886 SOX10P56693 466 aa11.78□□□□□ -0.52
COL6A2-207ENST00000460886 PRKG1Q13976 671 aa11.78□□□□□ -0.52
COL6A2-207ENST00000460886 PDE3AQ14432 1141 aa11.78□□□□□ -0.52
COL6A2-207ENST00000460886 MVPQ14764 893 aaKnown RBP11.78□□□□□ -0.52
COL6A2-207ENST00000460886 FBXO46Q6PJ61 603 aaPredicted RBP11.78□□□□□ -0.52
COL6A2-207ENST00000460886 FAM84BQ96KN1 310 aaPredicted RBP11.78□□□□□ -0.52
COL6A2-207ENST00000460886 R3HDMLQ9H3Y0 253 aa11.78□□□□□ -0.52
COL6A2-207ENST00000460886 TESPA1A2RU30 521 aaPredicted RBP11.77□□□□□ -0.53
COL6A2-207ENST00000460886 F8W031 263 aaPredicted RBP11.77□□□□□ -0.53
COL6A2-207ENST00000460886 FKTNO75072 461 aa11.77□□□□□ -0.53
COL6A2-207ENST00000460886 USP2O75604 605 aaPredicted RBP11.77□□□□□ -0.53
COL6A2-207ENST00000460886 RRP1P56182 461 aaKnown RBP11.77□□□□□ -0.53
COL6A2-207ENST00000460886 MKRN3Q13064 507 aaKnown RBP11.77□□□□□ -0.53
COL6A2-207ENST00000460886 RASA3Q14644 834 aa11.77□□□□□ -0.53
COL6A2-207ENST00000460886 SPDYE2Q495Y8 402 aa11.77□□□□□ -0.53
COL6A2-207ENST00000460886 MFSD14BQ5SR56 506 aa11.77□□□□□ -0.53
COL6A2-207ENST00000460886 NBPF12Q5TAG4 269 aaPredicted RBP11.77□□□□□ -0.53
COL6A2-207ENST00000460886 IFNL1Q8IU54 200 aa11.77□□□□□ -0.53
COL6A2-207ENST00000460886 VGLL2Q8N8G2 317 aa11.77□□□□□ -0.53
COL6A2-207ENST00000460886 KLHDC4Q8TBB5 520 aa11.77□□□□□ -0.53
COL6A2-207ENST00000460886 SLC10A4Q96EP9 437 aa11.77□□□□□ -0.53
COL6A2-207ENST00000460886 WNK4Q96J92 1243 aa11.77□□□□□ -0.53
COL6A2-207ENST00000460886 CLMNQ96JQ2 1002 aa11.77□□□□□ -0.53
COL6A2-207ENST00000460886 C1orf115Q9H7X2 142 aa11.77□□□□□ -0.53
COL6A2-207ENST00000460886 FZD1Q9UP38 647 aa11.77□□□□□ -0.53
COL6A2-207ENST00000460886 MROH5Q6ZUA9 1318 aa11.77□□□□□ -0.53
COL6A2-207ENST00000460886 RBBP6Q7Z6E9 1792 aaKnown RBP11.77□□□□□ -0.53
COL6A2-207ENST00000460886 CENPFP49454 3210 aa11.77□□□□□ -0.53
COL6A2-207ENST00000460886 CLRN2A0PK11 232 aa11.76□□□□□ -0.53
COL6A2-207ENST00000460886 IGF2BP3O00425 579 aaKnown RBP eCLIP11.76□□□□□ -0.53
COL6A2-207ENST00000460886 HIBADHP31937 336 aaKnown RBP11.76□□□□□ -0.53
COL6A2-207ENST00000460886 RFX5P48382 616 aaPredicted RBP11.76□□□□□ -0.53
COL6A2-207ENST00000460886 HDLBPQ00341 1268 aaKnown RBP11.76□□□□□ -0.53
COL6A2-207ENST00000460886 TNFAIP1Q13829 316 aa11.76□□□□□ -0.53
COL6A2-207ENST00000460886 FBXO33Q7Z6M2 555 aa11.76□□□□□ -0.53
COL6A2-207ENST00000460886 ANKRD13AQ8IZ07 590 aa11.76□□□□□ -0.53
COL6A2-207ENST00000460886 TEPSINQ96N21 525 aa11.76□□□□□ -0.53
COL6A2-207ENST00000460886 PUS3Q9BZE2 481 aaKnown RBP11.76□□□□□ -0.53
COL6A2-207ENST00000460886 DDX19BQ9UMR2 479 aa11.76□□□□□ -0.53
COL6A2-207ENST00000460886 SRGAP3O43295 1099 aa11.75□□□□□ -0.53
COL6A2-207ENST00000460886 GJA5P36382 358 aa11.75□□□□□ -0.53
COL6A2-207ENST00000460886 GYG1P46976 350 aa11.75□□□□□ -0.53
COL6A2-207ENST00000460886 IREB2P48200 963 aaKnown RBP11.75□□□□□ -0.53
COL6A2-207ENST00000460886 LRRC24Q50LG9 513 aa11.75□□□□□ -0.53
COL6A2-207ENST00000460886 MRIQ9BWK5 157 aa11.75□□□□□ -0.53
COL6A2-207ENST00000460886 VEZTQ9HBM0 779 aa11.75□□□□□ -0.53
COL6A2-207ENST00000460886 ZNF70Q9UC06 446 aaPredicted RBP11.75□□□□□ -0.53
COL6A2-207ENST00000460886 TTF2Q9UNY4 1162 aaKnown RBP11.75□□□□□ -0.53
COL6A2-207ENST00000460886 JAG2Q9Y219 1238 aa11.75□□□□□ -0.53
COL6A2-207ENST00000460886 BRCA2P51587 3418 aa11.74□□□□□ -0.53
COL6A2-207ENST00000460886 PDE8BO95263 885 aa11.74□□□□□ -0.53
COL6A2-207ENST00000460886 MTX1Q13505 466 aa11.74□□□□□ -0.53
COL6A2-207ENST00000460886 SIL1Q9H173 461 aa11.74□□□□□ -0.53
COL6A2-207ENST00000460886 PA2G4Q9UQ80 394 aaKnown RBP11.74□□□□□ -0.53
COL6A2-207ENST00000460886 PNMA6EA0A0J9YXQ4 647 aa11.73□□□□□ -0.53
COL6A2-207ENST00000460886 EYA2O00167 538 aa11.73□□□□□ -0.53
COL6A2-207ENST00000460886 MKI67P46013 3256 aaKnown RBP11.73□□□□□ -0.53
COL6A2-207ENST00000460886 CRKP46108 304 aa11.73□□□□□ -0.53
COL6A2-207ENST00000460886 RBM5P52756 815 aaKnown RBP eCLIP11.73□□□□□ -0.53
COL6A2-207ENST00000460886 ATP8B2P98198 1209 aa11.73□□□□□ -0.53
COL6A2-207ENST00000460886 METTL24Q5JXM2 366 aa11.73□□□□□ -0.53
COL6A2-207ENST00000460886 TBC1D22AQ8WUA7 517 aa11.73□□□□□ -0.53
COL6A2-207ENST00000460886 MS4A4AQ96JQ5 239 aa11.73□□□□□ -0.53
COL6A2-207ENST00000460886 PTPN18Q99952 460 aa11.73□□□□□ -0.53
COL6A2-207ENST00000460886 CHMP4BQ9H444 224 aaKnown RBP11.73□□□□□ -0.53
COL6A2-207ENST00000460886 TDRD3Q9H7E2 651 aaKnown RBP11.73□□□□□ -0.53
COL6A2-207ENST00000460886 ZBTB40Q9NUA8 1239 aa11.73□□□□□ -0.53
COL6A2-207ENST00000460886 MYH13Q9UKX3 1938 aa11.73□□□□□ -0.53
COL6A2-207ENST00000460886 SUGT1Q9Y2Z0 365 aa11.73□□□□□ -0.53
COL6A2-207ENST00000460886 FGFR2P21802 821 aa11.72□□□□□ -0.53
COL6A2-207ENST00000460886 CRHR2Q13324 411 aa11.72□□□□□ -0.53
COL6A2-207ENST00000460886 GRIK5Q16478 980 aa11.72□□□□□ -0.53
COL6A2-207ENST00000460886 PRPF38BQ5VTL8 546 aaKnown RBP11.72□□□□□ -0.53
COL6A2-207ENST00000460886 FKBP1CQ5VVH2 108 aa11.72□□□□□ -0.53
COL6A2-207ENST00000460886 OTUD7BQ6GQQ9 843 aa11.72□□□□□ -0.53
COL6A2-207ENST00000460886 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.72□□□□□ -0.53
COL6A2-207ENST00000460886 OTOP1Q7RTM1 612 aa11.72□□□□□ -0.53
COL6A2-207ENST00000460886 CDAN1Q8IWY9 1227 aa11.72□□□□□ -0.53
COL6A2-207ENST00000460886 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.72□□□□□ -0.53
COL6A2-207ENST00000460886 ZDHHC15Q96MV8 337 aa11.72□□□□□ -0.53
COL6A2-207ENST00000460886 COPRSQ9NQ92 184 aa11.72□□□□□ -0.53
COL6A2-207ENST00000460886 SUPT16HQ9Y5B9 1047 aaKnown RBP11.72□□□□□ -0.53
COL6A2-207ENST00000460886 RPAP1Q9BWH6 1393 aaPredicted RBP11.71□□□□□ -0.53
COL6A2-207ENST00000460886 ZBTB22O15209 634 aa11.71□□□□□ -0.53
COL6A2-207ENST00000460886 TNNI2P48788 182 aa11.71□□□□□ -0.53
COL6A2-207ENST00000460886 CAVIN4Q5BKX8 364 aa11.71□□□□□ -0.53
COL6A2-207ENST00000460886 CEP85Q6P2H3 762 aa11.71□□□□□ -0.53
COL6A2-207ENST00000460886 ATG9AQ7Z3C6 839 aa11.71□□□□□ -0.53
COL6A2-207ENST00000460886 FAM83AQ86UY5 434 aa11.71□□□□□ -0.53
COL6A2-207ENST00000460886 OPTNQ96CV9 577 aa11.71□□□□□ -0.53
COL6A2-207ENST00000460886 TMEM39BQ9GZU3 492 aa11.71□□□□□ -0.53
COL6A2-207ENST00000460886 FBXO3Q9UK99 471 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms